Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq6 116 3e-21 seq2 84.2 2e-11 seq4 82.4 7e-11 >seq6 Length=59463898 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || |||||||| || || ||| | || ||| | || || ||| | Sbjct 20997063 ATGCAAATCTTCGTGAAAACATTGACCGGCAAAACCATCACCCTTGAGGTGGAGAGTTCC 20997122 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || ||||| || | || ||| ||||| ||||| ||||| || || || |||||| Sbjct 20997123 GATACCATAGACAACGTGAAAGCTAAGATCCAAGACAAGGAAGGGATCCCACCAGATCAA 20997182 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || ||||| || | || ||| || ||| | ||||||| | | | | | ||||| ||| Sbjct 20997183 CAAAGACTTATCTTCGCCGGTAAACAATTAGAAGATGGCCGTACCCTTGCTGATTACAAC 20997242 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||||||||| || ||||||||||| | | |||||||| || Sbjct 20997243 ATCCAAAAAGAATCCACCCTTCATTTAGTGCTTCGGTTGAGAGGTGG 20997289 Score = 82.4 bits (90), Expect = 7e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 24084 GACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAA 24143 ||||| ||||| || ||||| || || ||||| |||||| | || ||||| || ||| Sbjct 24381340 GACAAGGAAGGTATCCCTCCTGACCAGCAGAGGTTGATTTTTGCTGGTAAGCAGCTGGAA 24381281 Query 24144 GATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTA 24203 |||| | | | ||||||||||| ||||| ||||| ||| |||| || ||||| Sbjct 24381280 GATGGTCGCACTCTTGCAGATTATAACATACAAAAGGAATCAACACTTCACTTGGTGTTG 24381221 Query 24204 AGATTGAGAGGAGGA 24218 || | ||||||||| Sbjct 24381220 AGGCTCAGAGGAGGA 24381206 >seq2 Length=36634854 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 || ||||| | || || ||||| |||| || ||| | || ||| |||| || || || Sbjct 8273354 AAGATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACAATCACCCTCGAGGTTGAATCC 8273413 Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 ||||| ||||| | |||||| || || ||||| ||||| || || || || Sbjct 8273414 TCTGACACAATCGACAACGTCAAAGCCAAAATCCAAGACAAGGAAGGGATTCCACCGGAC 8273473 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167 ||||| |||| || | || ||| || ||||||||||| | | | | || ||| || Sbjct 8273474 CAACAACGACTCATCTTCGCCGGAAAACAACTCGAAGACGGCCGCACTCTCGCCGACTAC 8273533 Query 24168 AACATTCAAAAAGAATCTACAATTCA 24193 ||||| || || ||||| || |||| Sbjct 8273534 AACATCCAGAAGGAATCAACTCTTCA 8273559 >seq4 Length=49191682 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/206 (70%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || ||||| |||| || ||| | || || | ||||| || || | Sbjct 19846855 ATGCAGATCTTCGTCAAAACCCTAACCGGCAAAACCATAACGCTAGAAGTAGAATCCTCC 19846796 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | || ||| || || ||||||||||| || || || ||||| Sbjct 19846795 GACACAATCGACAACGTGAAAGCCAAAATCCAAGACAAAGAAGGAATTCCACCGGATCAG 19846736 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA-ACGT-CAGCGATTATA 24168 ||| | |||| | || ||| || || | ||||| | |||| || | || ||||||| Sbjct 19846735 CAGCGGTTGATCTTCGCCGGAAAACAGTTAGAAGACGGGAGAACACTTGCA--GATTATA 19846678 Query 24169 ACATTCAAAAAGAATCTACAATTCAT 24194 | ||||| ||||| ||||| ||||| Sbjct 19846677 ATATTCAGAAAGAGTCTACGCTTCAT 19846652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429898655624685