Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq4 114 1e-20 seq6 113 4e-20 seq5 89.7 5e-13 >seq4 Length=49191682 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || || | ||| || || | ||| | || |||||||| || |||||||| ||| Sbjct 14093543 GCCTCCACGAAGACGGAGGACGAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGC 14093602 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| || |||||| |||||||| || ||| |||| | ||| |||||||||||||| Sbjct 14093603 AAGGGTACGGCCGTCCTCAAGCTGCTTTCCGGCGAAGATGAGACGTTGCTGGTCCGGAGG 14093662 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 |||||||| ||||| ||| || ||| | | || | |||||| | ||| | Sbjct 14093663 AATTCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTATCGATAGTATCAGAACTCTCTAC 14093722 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || ||||| || ||||| ||||| || ||||| Sbjct 14093723 CTCGAGAGTGATTGTCTTGCCGGTGAGGGTTTTCACGAAGATTTGCAT 14093770 Score = 107 bits (118), Expect = 2e-18 Identities = 143/199 (72%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || ||||| || ||||| || ||||| | || | | ||| |||| ||| || || Sbjct 19846659 GTAGACTCTTTCTGAATATTATAATCTGCAAGTGTTCTCCCGTCTTCTAACTGTTTTCCG 19846718 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| |||| || |||||||| ||||| || |||||||||||||| |||||| || Sbjct 19846719 GCGAAGATCAACCGCTGCTGATCCGGTGGAATTCCTTCTTTGTCTTGGATTTTGGCTTTC 19846778 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | || |||| ||| || | || | || | |||||| |||||||| ||| Sbjct 19846779 ACGTTGTCGATTGTGTCGGAGGATTCTACTTCTAGCGTTATGGTTTTGCCGGTTAGGGTT 19846838 Query 131218 TTTACGAAAATCTGCATGA 131236 || ||||| |||||||||| Sbjct 19846839 TTGACGAAGATCTGCATGA 19846857 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| | || | ||| |||||||| ||||| |||||||| Sbjct 14092632 CCACCACGAAGACGGAGCACAAGGTGAAGGGTGGACTCCTTCTGAATATTGTAATCAGCA 14092691 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| | ||||| | |||||| ||||| |||| || | |||||||||||| ||| Sbjct 14092692 AGGGTCCTTCCATCCTCCAACTGCTTCCCTGCAAAGATCAACCTCTGCTGGTCCGGTGGG 14092751 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || |||||||| || ||| ||| || ||| | | || | ||||| | | ||| | Sbjct 14092752 ATACCTTCTTTATC-CTGAATTTTTGCCTTCACATTATCAATGGTATCAGAGCTCTCCAC 14092810 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| || || || || | || || || ||||||||||| Sbjct 14092811 CTCAAGGGTAATTGTCTTCCCAGTCAAGGTCTTCACAAAAATCTGCAT 14092858 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATC-GCT 131066 ||||| || | ||||| ||| | || | ||| |||||||| || |||||||| || ||| Sbjct 14093088 CCACCACGAAGACGCAACACAAGGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCT 14093147 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| || || |||||||| || ||| |||| | | ||||||||| || || Sbjct 14093148 AA-GGTGCGGCCATCTTCAAGCTGCTTTCCGGCGAAGATGAGTCTCTGCTGGTCTGGTGG 14093206 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||||||||| ||||| ||| || ||| | | || | || || | | || | Sbjct 14093207 GATTCCTTCCTTGTCTTGGATCTTAGCCTTCACGTTGTCGATGGTGTCAGAGCTTTCAAC 14093266 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| |||||||| || || || || || |||||||| Sbjct 14093267 TTCGAGAGTGATGGTCTTACCGGTGAGGGTCTTCACAAAGATCTGCAT 14093314 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| || || | ||| | ||| || ||||| || || ||||| ||| Sbjct 14093316 CCTCCACGAAGACGGAGGACGAGATGAAGGGTAGATTCCTTCTGGATATTGTAGTCGGCG 14093375 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || |||||| || ||||| || ||| |||| | | |||||||||||| || Sbjct 14093376 AGGGTACGACCGTCCTCAAGTTGCTTTCCGGCGAAGATAAGTCTCTGCTGGTCCGGGGGA 14093435 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGAT 131186 |||||||| ||||| ||| || |||| | | | || | || |||| | |||| Sbjct 14093436 ATTCCTTCCTTGTCTTGGATCTT-GGCTTTAACGTTATCGATGGTGTCGGAGCTTTCGAC 14093494 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 || | || | ||| || || || || || || ||||| ||||||||| || Sbjct 14093495 CTCAAGAGTGATGGTCTTGCCTGTGAGGGTCTTGACGAAGATCTGCATGCCT 14093546 >seq6 Length=59463898 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| ||||| | ||| ||||| ||||| ||||||||||| Sbjct 17161443 CCACCACGGAGACGGAGCACCAAATGAAGGGTTGACTCTTTTTGGATGTTGTAATCAGCA 17161384 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| ||| ||||| |||||||||||||| | || | |||||||||||| || ||| Sbjct 17161383 AGGGTACGCCCATCCTCCAGCTGCTTGCCTGCAAAAATGAGACGCTGCTGGTCTGGTGGG 17161324 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| || || ||| | | || | ||||| | ||| | Sbjct 17161323 ATGCCTTCCTTGTCTTGAATCTTGGCCTTAACATTGTCTATGGTATCTGAACTCTCAACT 17161264 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | |||||| || || || || || || || || ||||| Sbjct 17161263 TCGAGAGTGATGGTTTTGCCAGTGAGGGTCTTCACAAATATTTGCAT 17161217 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATC-GC 131065 |||||| | ||| || ||||| ||||| | ||| ||||| || || ||||||||||| || Sbjct 20997518 GCCACCTCTCAATCGAAGCACCAAATGAAGGGTAGACTCTTTCTGGATGTTGTAATCAGC 20997459 Query 131066 TCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAG 131125 | | ||| | ||||| || || || ||||| |||| | | |||||| || |||| Sbjct 20997458 T-AGGGTTCTACCATCCTCAAGTTGTTTCCCTGCAAAGATAAGCCTCTGCTGATCAGGAG 20997400 Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 |||| || |||||||| ||| || ||||| | || | ||||| | || || | Sbjct 20997399 GGATACCCTCTTTGTCCTGGATCTTGGCCTTGACATTATCAATCGTATCAGACGATTCAA 20997340 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||| | |||||| ||||| | || || ||||| ||||||||| Sbjct 20997339 CCTCAAGGGTGATGGTTTTTCCGGTCAAGGTCTTAACGAATATCTGCATG 20997290 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| ||||| | || ||||||||||| ||||||||||| | Sbjct 17145885 CCACCACGGAGACGGAGCACCAAATGAAGTGTGGACTCCTTTTGGATGTTGTAATCTGCC 17145826 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || || || ||||| ||||| || |||| | | ||| ||||| || ||| Sbjct 17145825 AAAGTTCGGCCATCTTCAAGCTGTTTGCCCGCAAAGATGAGCCTCTGTTGGTCTGGTGGG 17145766 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| || || ||| | | || | ||||| | ||| | Sbjct 17145765 ATGCCTTCCTTGTCTTGAATCTTGGCCTTAACATTGTCTATGGTATCTGAACTCTCAACC 17145706 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| || || || || || || |||||||| ||||| Sbjct 17145705 TCGAGAGTTATGGTCTTGCCAGTGAGGGTCTTAACGAAAATTTGCAT 17145659 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| | ||| || ||||||||||| | ||| || || ||||| ||||||||||| Sbjct 20997290 GCCACCTCTCAACCGAAGCACTAAATGAAGGGTGGATTCTTTTTGGATGTTGTAATCAGC 20997231 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| || || |||| || || || ||| |||| | | || || || || || Sbjct 20997230 AAGGGTACGGCCATCTTCTAATTGTTTACCGGCGAAGATAAGTCTTTGTTGATCTGGTGG 20997171 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| ||||| ||||| ||| || || | | || | ||||||| ||| | Sbjct 20997170 GATCCCTTCCTTGTCTTGGATCTTAGCTTTCACGTTGTCTATGGTATCGGAACTCTCCAC 20997111 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | |||||| ||||| | ||||| ||||| || ||||| Sbjct 20997110 CTCAAGGGTGATGGTTTTGCCGGTCAATGTTTTCACGAAGATTTGCAT 20997063 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| ||||| | ||| ||||| || |||||||||||||| | Sbjct 17146113 CCACCACGGAGACGAAGCACCAAATGGAGGGTGGACTCTTTCTGAATGTTGTAATCTGCC 17146054 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || || || ||||| ||||| || |||| | | ||| ||||| || || Sbjct 17146053 AAAGTTCGGCCATCTTCAAGCTGTTTGCCAGCAAAGATGAGCCTCTGTTGGTCTGGTGGA 17145994 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || |||||||| || || ||| | | || | ||||| | | ||| | Sbjct 17145993 ATGCCCTCTTTGTCCTGAATCTTAGCCTTTACATTGTCGATGGTATCAGAGCTCTCCACC 17145934 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || ||||| ||||| || || || || ||||| Sbjct 17145933 TCAAGAGTGATGGTCTTTCCGGTGAGAGTCTTCACAAATATTTGCAT 17145887 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||||| || | ||| | || |||||||||||||||||||||||| | Sbjct 17146341 CCACCACGGAGACGCAAAACAAGATGGAGAGTTGACTCCTTTTGAATGTTGTAATCGGCC 17146282 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || || || |||||||| || || | || || | |||||||| || || Sbjct 17146281 AAGGTTCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGTGGA 17146222 Query 131128 ATTCCTTCTTTGTC 131141 || || |||||||| Sbjct 17146221 ATGCCCTCTTTGTC 17146208 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | ||| || || || ||||| | ||| || ||||| || |||||||||||| Sbjct 20997973 CCACCTCTCAATCGAAGTACCAAATGAAGGGTGGATTCCTTCTGTATGTTGTAATCGGCT 20997914 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| | ||||| |||||||| ||||| | || | | |||||| || |||||| Sbjct 20997913 AGGGTTCTTCCATCCTCAAGCTGCTTCCCTGCAAAAATAAGCCTCTGCTGATCAGGAGGG 20997854 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || || || ||| | | || |||| | || | ||||| | || || | Sbjct 20997853 ATACCCTCCTTATC-CTGAATCTTGGCTTTGACATTATCAATTGTATCCGATGATTCAAC 20997795 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || || || | ||| || || ||||| ||||| Sbjct 20997794 CTCCAGGGTGATGGTCTTTCCTGTCAAAGTCTTGACAAAAATTTGCAT 20997747 >seq5 Length=48169137 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || || ||||| |||||||| ||||| | || | ||||| |||||||| || Sbjct 36920934 GTAGATTCCTTCTGAATGTTATAATCAGCAAGAGTTCTTCCATCCTCAAGCTGCTTACCA 36920875 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 || | || |||||||| || ||||| || ||||| ||||| || || ||| || Sbjct 36920874 GCAAATATCAAACGCTGTTGATCCGGTGGAATTCCCTCTTTATCCTGAATCTTCGCTTTC 36920815 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | |||||| | ||| | || | ||| | |||||| |||||||| ||| Sbjct 36920814 ACGTTATCAATAGTATCAGAACTCTCAACCTCCAAGGTGATGGTTTTTCCGGTTAGGGTT 36920755 Query 131218 TTTACGAAAATCTGCAT 131234 || |||||||||||||| Sbjct 36920754 TTGACGAAAATCTGCAT 36920738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471970749559680