Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq6 95.1 1e-14 seq5 87.8 1e-12 >seq6 Length=59463898 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||| || |||||||| || || |||||||| || |||| ||| | | || Sbjct 17146098 AGCACCAAATGGAGGGTGGACTCTTTCTGAATGTTGTAATCTGCCAAAGTTCGGCCATCT 17146039 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | |||||||| ||| | || |||| ||||||||| || | |||||||||||| Sbjct 17146038 TCAAGCTGTTTGCCAGCAAAGATGAGCCTCTGTTGGTCTGGTGGAATGCCCTCTTTGTCC 17145979 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 ||| | ||| || | | | | || || | |||| || | |||||||| Sbjct 17145978 TGAATCTTAGCCTTTACATTGTCGATGGTATCAGAGCTCTCCACCTCAAGAGTGATGGTC 17145919 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||||||| || || || ||||| || ||||| Sbjct 17145918 TTTCCGGTGAGAGTCTTCACAAATATTTGCAT 17145887 Score = 86.0 bits (94), Expect = 5e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||| || || || | || |||| ||| || |||||||||||||| |||||||| || || Sbjct 17145886 CCCACCACGGAGACGGAGCACCAAATGAAGTGTGGACTCCTTTTGGATGTTGTAATCTGC 17145827 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 || ||| | | || || | |||||||||||| | || |||| ||||||||| || Sbjct 17145826 CAAAGTTCGGCCATCTTCAAGCTGTTTGCCCGCAAAGATGAGCCTCTGTTGGTCTGGTGG 17145767 Query 16828 CACGCCCTCTTTGTC 16842 | ||| || ||||| Sbjct 17145766 GATGCCTTCCTTGTC 17145752 >seq5 Length=48169137 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 16705 TTACCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTC 16764 ||| || || || ||||| || || | || || || || ||||| || ||||| || || Sbjct 36920968 TTAACCACCACGGAGCCTGAGAACAAGGTGAAGTGTAGATTCCTTCTGAATGTTATAATC 36920909 Query 16765 GGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCAC 16824 || | ||| | | ||||| | || || || ||| | || | |||||||| ||| Sbjct 36920908 AGCAAGAGTTCTTCCATCCTCAAGCTGCTTACCAGCAAATATCAAACGCTGTTGATCCGG 36920849 Query 16825 AGGCACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTC 16884 || | |||||||| || ||| | | ||||| | | | ||| || ||| Sbjct 36920848 TGGAATTCCCTCTTTATCCTGAATCTTCGCTTTCACGTTATCAATAGTATCAGAACTCTC 36920789 Query 16885 CGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| |||||||||||||||||| || |||||||| ||||||||||| Sbjct 36920788 AACCTCCAAGGTGATGGTTTTTCCGGTTAGGGTTTTGACGAAAATCTGCAT 36920738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405052813929730