Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq55 235 7e-57 seq104 147 3e-30 seq5 104 3e-17 seq6 100 4e-16 >seq55 Length=606834 Score = 235 bits (260), Expect = 7e-57 Identities = 605/909 (67%), Gaps = 12/909 (1%) Strand=Plus/Minus Query 32369 TTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATT 32428 ||| || ||||| || || || || || ||||| ||||| || |||| | || || Sbjct 250544 TTTCTGATATTCCCCAACGCGCTTCTCAAAAAAGTTAGTCTTCCCTTGAAGAGAAATCAA 250485 Query 32429 TTCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAAT 32488 ||||| |||| || ||||| ||||||||||| ||| | | || | ||| | Sbjct 250484 CTCCATCCAATCAAAAGGATTCTGAACATTATAAACTTTCCCACAACCAAGCTCACCCAA 250425 Query 32489 CAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTAT-AA 32547 ||| ||||| || || || || ||||| |||||| |||| |||||| || | || Sbjct 250424 CAACCTATCGGCAACGAACTCAATATACTGGCTCATCAAATCACCATTCATCCCGACCAA 250365 Query 32548 GTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAA 32607 || ||||| || || || ||| || ||||| ||||| || | | || Sbjct 250364 CGCGCAC-GGAAGCGCGTCACAAACAAACTCCCTCTCAATCTCAACCGCATCACTCACAA 250306 Query 32608 TAGATCTT-ACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCG 32666 | |||| ||| || |||||| || || | || || | | | |||||| || Sbjct 250305 TCT-TCTTCACTCGCTCCTCACTCAGTTTATTCCTCAATAGTGAATAAAGCAAACAAGCA 250247 Query 32667 AAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGC 32726 ||||| || || || || ||||| | ||| | ||||| ||||| || | || ||| Sbjct 250246 AAATCACAATGAAGTCCTTCGTCACGCGAAATAAGCTCGTTTGAAAAAGTTAAACCAGGC 250187 Query 32727 ATTAGGCCACGCTTTTTAAGCCAAAATATGG-ACGCAAATGATCCAGAAAAGAAAATTCC 32785 |||| ||||| |||||||||||||| || | || ||| | ||||| || ||||| || Sbjct 250186 ATTAAACCACGTTTTTTAAGCCAAAAAATTGCACAGAAACTA-CCAGAGAAAAAAATACC 250128 Query 32786 TTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTC--ATGTATCCAC 32843 ||| || ||||| |||| | ||| || || | || | | | || ||||| Sbjct 250127 TTCAACGCAAGCAAAAGCAACGATTCTTTCAGCAAA--CGAATCCGACGAATCGATCCAT 250070 Query 32844 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGA 32903 || ||||||||| || ||||| | |||||| || ||||| ||||||| ||| | | Sbjct 250069 TTCAAAGCCCAATCCGCTTTCTTACGAATACAAGGAATCGTCTCAATAGCATGAAACAAA 250010 Query 32904 TAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAA 32963 || || ||| ||| | | ||| || |||| | |||||||||||||| ||| Sbjct 250009 CGATTCTTCTCAACCGAATCGCTTATATACGTTTCAAGAAGGAGACTATACATTTCAGAA 249950 Query 32964 TGAATGTTTTCAATGGCCATTTGAAATCCGT-AGAAGCATCTAGCCTCGGTAATCTGTAC 33022 || || || ||||| || |||||||| |||| | ||||| | ||||| | || || || Sbjct 249949 TGTATATTCTCAATCGCGATTTGAAAACCGTAAAAAGCA-CGCGCCTCTGAAACTTGAAC 249891 Query 33023 TTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 33082 |||| | |||| | | || | ||| || || || ||||| || || ||||| Sbjct 249890 TTCTTTCATGAATCTTCCAGCAAGATTCTCTAAAACGATGCCGTCGGATGCGGCGAAAAA 249831 Query 33083 CGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGAT 33142 || | || || || ||| | | |||| | |||| || ||||||| | | Sbjct 249830 TGCAAGAACGTGGGATACAAAGTGTCGTTCGCCGTCAGTTAAATTGTTCCAATGTTGAAG 249771 Query 33143 ATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACAT 33202 ||||| |||| ||| |||||||| | ||||| ||||| || || || ||||| ||||| Sbjct 249770 ATCTTGTGATAAATCAACTTCTTCGGCGGTCCAGAATGAGGCTTCGGCTTTTTTGTACAT 249711 Query 33203 ATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTGGATTTTTTGCAAG 33262 | ||| || | | | |||| |||||| || ||| ||| | | ||| ||| ||||| Sbjct 249710 TTCCCAAATTTTAGGGTATTCAATTGGGAACATACAAAAACGGTCTGGGTTTGGAGCAAG 249651 Query 33263 GATTGGTTC 33271 | ||| || Sbjct 249650 AAGTGGCTC 249642 Score = 235 bits (260), Expect = 7e-57 Identities = 605/909 (67%), Gaps = 12/909 (1%) Strand=Plus/Minus Query 32369 TTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATT 32428 ||| || ||||| || || || || || ||||| ||||| || |||| | || || Sbjct 259227 TTTCTGATATTCCCCAACGCGCTTCTCAAAAAAGTTAGTCTTCCCTTGAAGAGAAATCAA 259168 Query 32429 TTCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAAT 32488 ||||| |||| || ||||| ||||||||||| ||| | | || | ||| | Sbjct 259167 CTCCATCCAATCAAAAGGATTCTGAACATTATAAACTTTCCCACAACCAAGCTCACCCAA 259108 Query 32489 CAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTAT-AA 32547 ||| ||||| || || || || ||||| |||||| |||| |||||| || | || Sbjct 259107 CAACCTATCGGCAACGAACTCAATATACTGGCTCATCAAATCACCATTCATCCCGACCAA 259048 Query 32548 GTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAA 32607 || ||||| || || || ||| || ||||| ||||| || | | || Sbjct 259047 CGCGCAC-GGAAGCGCGTCACAAACAAACTCCCTCTCAATCTCAACCGCATCACTCACAA 258989 Query 32608 TAGATCTT-ACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCG 32666 | |||| ||| || |||||| || || | || || | | | |||||| || Sbjct 258988 TCT-TCTTCACTCGCTCCTCACTCAGTTTATTCCTCAATAGTGAATAAAGCAAACAAGCA 258930 Query 32667 AAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGC 32726 ||||| || || || || ||||| | ||| | ||||| ||||| || | || ||| Sbjct 258929 AAATCACAATGAAGTCCTTCGTCACGCGAAATAAGCTCGTTTGAAAAAGTTAAACCAGGC 258870 Query 32727 ATTAGGCCACGCTTTTTAAGCCAAAATATGG-ACGCAAATGATCCAGAAAAGAAAATTCC 32785 |||| ||||| |||||||||||||| || | || ||| | ||||| || ||||| || Sbjct 258869 ATTAAACCACGTTTTTTAAGCCAAAAAATTGCACAGAAACTA-CCAGAGAAAAAAATACC 258811 Query 32786 TTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTC--ATGTATCCAC 32843 ||| || ||||| |||| | ||| || || | || | | | || ||||| Sbjct 258810 TTCAACGCAAGCAAAAGCAACGATTCTTTCAGCAAA--CGAATCCGACGAATCGATCCAT 258753 Query 32844 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGA 32903 || ||||||||| || ||||| | |||||| || ||||| ||||||| ||| | | Sbjct 258752 TTCAAAGCCCAATCCGCTTTCTTACGAATACAAGGAATCGTCTCAATAGCATGAAACAAA 258693 Query 32904 TAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAA 32963 || || ||| ||| | | ||| || |||| | |||||||||||||| ||| Sbjct 258692 CGATTCTTCTCAACCGAATCGCTTATATACGTTTCAAGAAGGAGACTATACATTTCAGAA 258633 Query 32964 TGAATGTTTTCAATGGCCATTTGAAATCCGT-AGAAGCATCTAGCCTCGGTAATCTGTAC 33022 || || || ||||| || |||||||| |||| | ||||| | ||||| | || || || Sbjct 258632 TGTATATTCTCAATCGCGATTTGAAAACCGTAAAAAGCA-CGCGCCTCTGAAACTTGAAC 258574 Query 33023 TTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 33082 |||| | |||| | | || | ||| || || || ||||| || || ||||| Sbjct 258573 TTCTTTCATGAATCTTCCAGCAAGATTCTCTAAAACGATGCCGTCGGATGCGGCGAAAAA 258514 Query 33083 CGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGAT 33142 || | || || || ||| | | |||| | |||| || ||||||| | | Sbjct 258513 TGCAAGAACGTGGGATACAAAGTGTCGTTCGCCGTCAGTTAAATTGTTCCAATGTTGAAG 258454 Query 33143 ATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACAT 33202 ||||| |||| ||| |||||||| | ||||| ||||| || || || ||||| ||||| Sbjct 258453 ATCTTGTGATAAATCAACTTCTTCGGCGGTCCAGAATGAGGCTTCGGCTTTTTTGTACAT 258394 Query 33203 ATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTGGATTTTTTGCAAG 33262 | ||| || | | | |||| |||||| || ||| ||| | | ||| ||| ||||| Sbjct 258393 TTCCCAAATTTTAGGGTATTCAATTGGGAACATACAAAAACGGTCTGGGTTTGGAGCAAG 258334 Query 33263 GATTGGTTC 33271 | ||| || Sbjct 258333 AAGTGGCTC 258325 >seq104 Length=244920 Score = 147 bits (162), Expect = 3e-30 Identities = 244/346 (71%), Gaps = 11/346 (3%) Strand=Plus/Plus Query 32658 AAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAAT-TCGTTGGAAAACGT 32716 ||||| |||||||| || || || || ||||| | || || ||| ||||| ||||| || Sbjct 172064 AAACAAGCGAAATCACAATGAAGTCCTTCGTCAC-ACAAAATAAGCTCGTTTGAAAAAGT 172122 Query 32717 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGG-ACGCAAATGATCCAGAAA 32775 | || |||||| ||||| ||||||||||||||||| | || ||| | | ||| | Sbjct 172123 TAAACCATGCATTAAACCACGTTTTTTAAGCCAAAATATCGCACATAAACTA-CTAGAGA 172181 Query 32776 AGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCAT---AACCGGCGCTGT 32832 | ||||| ||||| || ||||| |||| | ||| || || || || || Sbjct 172182 AAAAAATACCTTCAACGCAAGCAAAAGCAACGATTCTTTCAACAATCAAATCGACGA--- 172238 Query 32833 CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAG 32892 || ||||| || ||||||||| || ||||| | |||||| || ||||| |||| Sbjct 172239 -ATCGATCCATTTCAAAGCCCAATCCGCTTTCTTACGAATACAAGGAATCGTCTCAATAG 172297 Query 32893 CATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTAT 32952 ||| ||| | | | || || ||| ||| | | |||||| |||| | ||||||| Sbjct 172298 CATGAAACAAACAATTCTTCTCAACCAAATCGCTTATATATGTTTCAAGAAGGAGACTAT 172357 Query 32953 ACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAA 32998 ||||||| ||||| || || ||||| || ||||| || | |||||| Sbjct 172358 ACATTTCAGAATGTATATTCTCAATCGCGATTTGGAACCTGTAGAA 172403 >seq5 Length=48169137 Score = 104 bits (114), Expect = 3e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 63226 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63285 ||| |||||||| | || | || |||| |||| | || | || |||||||| |||||| Sbjct 35185794 TCCACCCTGATCAACATAGCGGGCAGTGTCATTAAACACACGCAGCATTGGAACAATACC 35185735 Query 63286 ATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 63345 ||| || || ||||| || || || || || ||| |||||| || ||| ||| || Sbjct 35185734 ATTAGACGTCCCATTTGTTCCACGAATGTAACTACCATGGGCACGTATGTTATGAATAGA 35185675 Query 63346 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 63405 | ||| ||||| ||||| |||| || | || || || || |||||||| || Sbjct 35185674 AACACCAATTCCTCCTGCAGATTTACTAATAATAGCACACTCCTTCAATGTATCATAAAT 35185615 Query 63406 GCCCTCTATACTATCATCCATCATG 63430 ||||| ||||||||||| ||||| Sbjct 35185614 CCCCTCAATACTATCATCTTTCATG 35185590 Score = 93.3 bits (102), Expect = 5e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 63467 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTG 63526 || || ||||| || | || || ||||||||||| |||||| ||| ||| | || | Sbjct 35185462 GTCCCAGCATTGAAAAGAGTTGGCGAAGCGTGAGTGAACCATCTTTGAGACATTAAGTGA 35185403 Query 63527 TACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAAC 63586 || || | || ||| || |||||||| | ||||||||| || | || | ||| ||| Sbjct 35185402 TAAGTTTTAACAGCAGATTCTATATCATCCTTATGAATTCCAACAGAAACCCTCATCAAC 35185343 Query 63587 ATGTGCTGAGGTCTTTCAACGATCTTGTTGTT-TATTTTCAACAAGTAGGATTTTTCCAA 63645 || |||||||| ||||| || | ||| | || | |||||||| || ||| | || | Sbjct 35185342 ATATGCTGAGGCCTTTCCAC-AACTTTTCCTTGAACTTTCAACAGATAAGATCTCTCTAG 35185284 Query 63646 AGTTTTAAAACCAAAATA 63663 ||||| || ||||| || Sbjct 35185283 GGTTTTGAATCCAAAGTA 35185266 >seq6 Length=59463898 Score = 100 bits (110), Expect = 4e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 63226 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63285 ||| |||||||| | || | || |||| |||| | || | | |||||||| |||||| Sbjct 7426929 TCCACCCTGATCAACATAGCGGGCAGTGTCATTAAACACACGGAGCATTGGAACAATACC 7426870 Query 63286 ATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 63345 ||| ||||| ||||| || ||| || || || ||| ||||| || ||| || || Sbjct 7426869 ATTAGATGTCCCATTTGTTCCTCGAATGTAACTACCATGTGCACGTATGTTATGAACAGA 7426810 Query 63346 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 63405 | ||| ||||| ||||| |||| || | || || || || |||||||| || Sbjct 7426809 AACACCAATTCCTCCTGCAGATTTACTAATAACAGCACACTCCTTCAAAGTATCATAAAT 7426750 Query 63406 GCCCTCTATACTATCATCCATCATG 63430 ||||| ||||||||||| ||||| Sbjct 7426749 CCCCTCAATACTATCATCTTTCATG 7426725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633575551309200