Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq55 104 5e-17 >seq55 Length=606834 Score = 104 bits (114), Expect = 5e-17 Identities = 332/508 (65%), Gaps = 18/508 (4%) Strand=Plus/Plus Query 243239 TTCATAACAAGGCAAAATGGGCTCAGAAGTGGCTAGAACC--CGGTAAATCATTTGCTGA 243296 ||| ||| || || | |||||| ||| ||| | || | ||| | || |||||||| Sbjct 250042 TTCGTAAGAAAGCGGATTGGGCTTTGAAATGGATCGATTCGTCGG--ATTCGTTTGCTGA 250099 Query 243297 GCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCAT 243356 | |||| || | | ||||||||||||||| | || || || |||||||| || || Sbjct 250100 AAGAATCGTTGCTTTTGCTTGCGTTGAAGGTATTTTTTTCTCTGGTAGTTTCTGTGCAAT 250159 Query 243357 CTTTTGGCTGCGGAACAAAGGTG---TGATGCCTGGCCTCGGTCTGTCTAACGAGTTCAT 243413 |||||||| || ||| ||| | |||||||| | | | || |||||| | || Sbjct 250160 TTTTTGGCTT---AAAAAACGTGGTTTAATGCCTGGTTTAACTTTTTCAAACGAGCTTAT 250216 Query 243414 CAGTCGCGACGAGGGCCTTCACCAACAGTTCG---GTGAGCTTATGTATTCAAAGCTCCA 243470 || ||||| || ||||| | || | || |||| |||||| | Sbjct 250217 TTCGCGTGACGAAGGACTTCATTGTGATTTTGCTTGTTTGCTT---TATTCACTATTGAG 250273 Query 243471 GAACAAGCTACCATTCGAAACG-GTCAAACAAATCATCACAGAAGCAGTTGAAAACGAAA 243529 ||| || || | | | || || || | || | | || || ||||| | || | Sbjct 250274 GAATAAACTGAG-TGAGGAGCGAGTGAAGAAGATTGTGAGTGATGCGGTTGAGATTGAGA 250332 Query 243530 AGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGG 243589 ||| || |||| ||||| |||| ||| | | | || ||||| ||| | ||| Sbjct 250333 GGGAGTTTGTTTGTGACGCGCTTCCGTGCGCGTTGGTCGGGATGAATGGTGATTTGATGA 250392 Query 243590 GACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGT 243649 | ||||| || || ||||| ||||| | | || | |||||||| || |||||| | Sbjct 250393 GCCAGTATATTGAGTTCGTTGCCGATAGGTTGTTGGGTGAGCTTGGTTGTGGGAAAGTTT 250452 Query 243650 ACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACT 243709 | || |||| || |||| | |||||| | ||||| ||||||||||| ||||||| Sbjct 250453 ATAATGTTCAGAATCCTTTTGATTGGATGGAGTTGATTTCTCTTCAAGGGAAGACTAACT 250512 Query 243710 TCTTCGAAAAGCGTGTCAGTGATTATCA 243737 | || || ||||| || | || ||||| Sbjct 250513 TTTTTGAGAAGCGCGTTGGGGAATATCA 250540 Score = 104 bits (114), Expect = 5e-17 Identities = 332/508 (65%), Gaps = 18/508 (4%) Strand=Plus/Plus Query 243239 TTCATAACAAGGCAAAATGGGCTCAGAAGTGGCTAGAACC--CGGTAAATCATTTGCTGA 243296 ||| ||| || || | |||||| ||| ||| | || | ||| | || |||||||| Sbjct 258725 TTCGTAAGAAAGCGGATTGGGCTTTGAAATGGATCGATTCGTCGG--ATTCGTTTGCTGA 258782 Query 243297 GCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCAT 243356 | |||| || | | ||||||||||||||| | || || || |||||||| || || Sbjct 258783 AAGAATCGTTGCTTTTGCTTGCGTTGAAGGTATTTTTTTCTCTGGTAGTTTCTGTGCAAT 258842 Query 243357 CTTTTGGCTGCGGAACAAAGGTG---TGATGCCTGGCCTCGGTCTGTCTAACGAGTTCAT 243413 |||||||| || ||| ||| | |||||||| | | | || |||||| | || Sbjct 258843 TTTTTGGCTT---AAAAAACGTGGTTTAATGCCTGGTTTAACTTTTTCAAACGAGCTTAT 258899 Query 243414 CAGTCGCGACGAGGGCCTTCACCAACAGTTCG---GTGAGCTTATGTATTCAAAGCTCCA 243470 || ||||| || ||||| | || | || |||| |||||| | Sbjct 258900 TTCGCGTGACGAAGGACTTCATTGTGATTTTGCTTGTTTGCTT---TATTCACTATTGAG 258956 Query 243471 GAACAAGCTACCATTCGAAACG-GTCAAACAAATCATCACAGAAGCAGTTGAAAACGAAA 243529 ||| || || | | | || || || | || | | || || ||||| | || | Sbjct 258957 GAATAAACTGAG-TGAGGAGCGAGTGAAGAAGATTGTGAGTGATGCGGTTGAGATTGAGA 259015 Query 243530 AGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGG 243589 ||| || |||| ||||| |||| ||| | | | || ||||| ||| | ||| Sbjct 259016 GGGAGTTTGTTTGTGACGCGCTTCCGTGCGCGTTGGTCGGGATGAATGGTGATTTGATGA 259075 Query 243590 GACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGT 243649 | ||||| || || ||||| ||||| | | || | |||||||| || |||||| | Sbjct 259076 GCCAGTATATTGAGTTCGTTGCCGATAGGTTGTTGGGTGAGCTTGGTTGTGGGAAAGTTT 259135 Query 243650 ACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACT 243709 | || |||| || |||| | |||||| | ||||| ||||||||||| ||||||| Sbjct 259136 ATAATGTTCAGAATCCTTTTGATTGGATGGAGTTGATTTCTCTTCAAGGGAAGACTAACT 259195 Query 243710 TCTTCGAAAAGCGTGTCAGTGATTATCA 243737 | || || ||||| || | || ||||| Sbjct 259196 TTTTTGAGAAGCGCGTTGGGGAATATCA 259223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102779290857450