Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq7120 82.4 9e-11 seq6 82.4 9e-11 seq5 82.4 9e-11 >seq7120 Length=14710 Score = 82.4 bits (90), Expect = 9e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 173698 AAACTCCGAAGAATAGATGTTCGTCAACTTGGCACCGTAGCCATTGCGTCCACCAACAAT 173757 |||||| | ||| |||| ||||| | ||| ||||| || ||||| ||||||||| | | Sbjct 6376 AAACTCAGTCGAAAAGATATTCGTGAGCTTCGCACCATAACCATTACGTCCACCAGTAGT 6317 Query 173758 TCTCTTCTTGTTGTCATCGTAGTTTGTACTCGTGAGGAGGTGACCAAA 173805 | ||||| || ||||||||||| |||| || || |||||||| || Sbjct 6316 TTTCTTCACATTATCATCGTAGTTACTACTAGTAAGAAGGTGACCGAA 6269 >seq6 Length=59463898 Score = 82.4 bits (90), Expect = 9e-11 Identities = 172/255 (67%), Gaps = 6/255 (2%) Strand=Plus/Minus Query 10819 GTCAAGGATATCAATGCGGTTCGTCGCCGCGATGACAACGATGCCCGTCTCGTTATCAAA 10878 |||||| || || | ||| || || || | ||||| ||| || || | ||||| Sbjct 13715569 GTCAAGAATGTCGGCCCTGTTAGTTGCTGCAACGACAATGATACCAGTATTACCCTCAAA 13715510 Query 10879 GCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCGGGCAT 10938 |||||||| || ||||| |||||||||| ||||||||| | ||||||||| | Sbjct 13715509 TCCATCCATTTCTGTCAAAAGTTGATTGAGGGTTTGTTCTCTCTCATCATTCCCTCC--- 13715453 Query 10939 ACCA---CCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACA 10995 |||| || | | | ||| | || || || ||||||||||| | || || || || Sbjct 13715452 ACCAATTCCTGTCCCTCTTTGTCTTCCAACAGCATCAATTTCATCAACAAAGACAATGCA 13715393 Query 10996 CGGTTGATTTTCACGGGCAACTTCAAAGATATCTCGGACTCTCTTGGCACCGACACCCAC 11055 || ||| || ||| || || | ||| ||||| | ||||||| ||| || Sbjct 13715392 AGGAGCATTCTCTTTGGCCTTTTTGAATAAATCACGGACACGAGAAGCACCGATACCAAC 13715333 Query 11056 AAACATTTCCACAAA 11070 |||||| || ||||| Sbjct 13715332 AAACATCTCAACAAA 13715318 >seq5 Length=48169137 Score = 82.4 bits (90), Expect = 9e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 173698 AAACTCCGAAGAATAGATGTTCGTCAACTTGGCACCGTAGCCATTGCGTCCACCAACAAT 173757 |||||| | ||| |||| ||||| | ||| ||||| || ||||| ||||||||| | | Sbjct 17100777 AAACTCAGTCGAAAAGATATTCGTGAGCTTCGCACCATAACCATTACGTCCACCAGTAGT 17100836 Query 173758 TCTCTTCTTGTTGTCATCGTAGTTTGTACTCGTGAGGAGGTGACCAAA 173805 | ||||| || ||||||||||| |||| || || |||||||| || Sbjct 17100837 TTTCTTCACATTATCATCGTAGTTACTACTAGTAAGAAGGTGACCGAA 17100884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597300383261160