Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq5 149 6e-31 seq6 118 1e-21 seq4 113 4e-20 >seq5 Length=48169137 Score = 149 bits (164), Expect = 6e-31 Identities = 174/230 (76%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || ||||| | ||| | ||||||||| | ||| || || ||||| ||||||||||| || Sbjct 36920736 CCGCCGCGAAGTCGAAGCACCAAATGAAGCGTTGATTCCTTTTGGATATTGTAATCCGCC 36920677 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | || |||| |||||||| ||| |||||||||| ||||| || ||||| Sbjct 36920676 AGTGTCCTTCCGTCTTCTAATTGTTTTCCGGCGAAGATCAATCGTTGCTGGTCTGGAGGA 36920617 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGC-TTGA-GTTGTTCGACGGTGTCCGTACTCTCGA 127064 || ||||||||||| ||| ||| ||| || | ||||| ||| || || | |||||| | Sbjct 36920616 ATACCCTCCTTGTCT-TGAATTTTTGCCTTCACGTTGT-CGATTGTATCGGAACTCTCTA 36920559 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 | || | ||| | ||||||||||| || ||||| || || ||||||||| Sbjct 36920558 CCTCTAGGGTAATGGTTTTGCCGGTTAGGGTTTTCACGAAGATCTGCATG 36920509 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 ||||| || || ||||| || ||||| | | || | ||| || ||||| || ||| Sbjct 36920934 GTAGATTCCTTCTGAATGTTATAATCAGCAAGAGTTCTTCCATCCTCAAGCTGCTTACCA 36920875 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || | ||||| ||||| ||||| || || || ||||| || ||| || ||| || Sbjct 36920874 GCAAATATCAAACGCTGTTGATCCGGTGGAATTCCCTCTTTATCCTGAATCTTCGCTTTC 36920815 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | || || | |||||| || || | ||| | ||||| ||||| || ||| Sbjct 36920814 ACGTTATCAATAGTATCAGAACTCTCAACCTCCAAGGTGATGGTTTTTCCGGTTAGGGTT 36920755 Query 127097 TTTACAAAAATCTGCAT 127113 || || ||||||||||| Sbjct 36920754 TTGACGAAAATCTGCAT 36920738 >seq6 Length=59463898 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||||| |||| || | || |||||||| || || |||||||| || Sbjct 17161899 CCACCACGAAGACGCAAAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGCC 17161840 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| ||| || |||||||||||||| |||| | | ||||||||| || || Sbjct 17161839 AAGGTTCGACCATCTTCAAGCTGTTTTCCAGCAAAGATGAGCCTCTGCTGATCAGGTGGG 17161780 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || ||||| ||||| ||| || ||||| | || | |||||| | |||||| ||| Sbjct 17161779 ATACCCTCTTTGTCTTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAACTCTCAACT 17161720 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || | ||| | || || || || || || || || || || |||||| Sbjct 17161719 TCAAGGGTGATGGTCTTTCCTGTGAGGGTCTTGACGAAGATTTGCATG 17161672 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || |||||||| || ||||||||||| ||| || ||| ||| || ||||| |||||| Sbjct 17146539 GTGGACTCTTTCTGGATATTGTAATCAGCCAGAGTCCGACCATCTTCAAGCTGCTTTCCA 17146480 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || | ||||||| ||||| || || || || |||||||| ||| || || ||| Sbjct 17146479 GCAAAAATCAATCTTTGCTGGTCTGGGGGAATACCCTCCTTATCCTGTATCTTGGCCTTT 17146420 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||||| | ||||| || || | || | |||||||| || || || Sbjct 17146419 ACATTGTCGATTGTGTCTGAGCTCTCAACCTCCAAAGTAATAGTTTTGCCTGTGAGGGTC 17146360 Query 127097 TTTACAAAAATCTGCAT 127113 || |||||||||||||| Sbjct 17146359 TTAACAAAAATCTGCAT 17146343 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| || | || | ||||||||| | || ||||||||||| || |||||||| | Sbjct 17161444 TCCACCACGGAGACGGAGCACCAAATGAAGGGTTGACTCTTTTTGGATGTTGTAATCAGC 17161385 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | || || ||| || ||||| || || || | || | |||||||| || || || Sbjct 17161384 AAGGGTACGCCCATCCTCCAGCTGCTTGCCTGCAAAAATGAGACGCTGCTGGTCTGGTGG 17161325 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||| |||||||| || || ||| | | || | ||| || | |||||| || Sbjct 17161324 GATGCCTTCCTTGTCTTGAATCTTGGCCTTAACATTGTCTATGGTATCTGAACTCTCAAC 17161265 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| || | |||||||| || || || || ||||| || ||||| Sbjct 17161264 TTCGAGAGTGATGGTTTTGCCAGTGAGGGTCTTCACAAATATTTGCAT 17161217 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| | ||||| | ||||||||| | ||||||||||| || || |||||||| | Sbjct 20997517 CCACCTCTCAATCGAAGCACCAAATGAAGGGTAGACTCTTTCTGGATGTTGTAATCAGCT 20997458 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | | ||| || || ||||| || || |||| | | ||||||||| ||||| Sbjct 20997457 AGGGTTCTACCATCCTCAAGTTGTTTCCCTGCAAAGATAAGCCTCTGCTGATCAGGAGGG 20997398 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || ||||| |||||| ||| || ||||| | || | || || | || || Sbjct 20997397 ATACCCTCTTTGTCCTGGATCTTGGCCTTGACATTATCAATCGTATCAGACGATTCAACC 20997338 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || | ||| | ||||| ||||||| || || || || ||||||||| Sbjct 20997337 TCAAGGGTGATGGTTTTTCCGGTCAAGGTCTTAACGAATATCTGCATG 20997290 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| | || || | ||| ||||| | || || |||||||| || |||||||| | Sbjct 20997289 CCACCTCTCAACCGAAGCACTAAATGAAGGGTGGATTCTTTTTGGATGTTGTAATCAGCA 20997230 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| |||| ||||| || ||| |||| | || || ||||| || || Sbjct 20997229 AGGGTACGGCCATCTTCTAATTGTTTACCGGCGAAGATAAGTCTTTGTTGATCTGGTGGG 20997170 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || |||||||| ||| || || | ||||| | | ||| || | |||||| || Sbjct 20997169 ATCCCTTCCTTGTCTTGGATCTTAGCTTTCACGTTGT-CTATGGTATCGGAACTCTCCAC 20997111 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | ||||||||||||| ||||| || || || ||||| Sbjct 20997110 CTCAAGGGTGATGGTTTTGCCGGTCAATGTTTTCACGAAGATTTGCAT 20997063 Score = 98.7 bits (108), Expect = 9e-16 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 126896 AATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGA 126955 ||||| | |||||||| | || || || ||||| ||||||||||| | | |||||| Sbjct 20997736 AATCGAAGTACCAAATGAAGGGTGGATTCCTTTTGGATATTGTAATCAGCTAGGGTGCGA 20997677 Query 126956 GAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCC 127015 ||| || | || || || ||| |||| | | ||||||||| ||||| || ||||| Sbjct 20997676 CCATCTTCCAATTGCTTACCGGCGAAGATAAGCCTCTGCTGATCAGGAGGGATACCCTCT 20997617 Query 127016 TTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTC 127075 |||||| ||| || |||| | || | || || | | || || |||| ||| Sbjct 20997616 TTGTCCTGGATCTTGGCTTTGACATTATCAATCGTATCAGAAGATTCAACCTCGAGGGTA 20997557 Query 127076 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 | || || || |||| ||| || |||||||| |||||| Sbjct 20997556 ATGGTCTTCCCTGTCAAAGTCTTAACAAAAATTTGCATG 20997518 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||| | ||||||||| | || || ||||| |||||||||||||| | Sbjct 17161671 CCACCACGGAGTCGGAGCACCAAATGAAGGGTGGATTCTTTCTGAATATTGTAATCTGCT 17161612 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || |||||||| ||||| | || | | ||| || || || || Sbjct 17161611 AAAGTTCGGCCATCCTCAAGCTGTTTGCCAGCAAAAATGAGCCTCTGTTGGTCTGGTGGA 17161552 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 |||| |||||||||| || || ||||| | || | || || | || || || Sbjct 17161551 ATGCTCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATAGTATCAGAGCTTTCCACC 17161492 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | ||| || || || ||||| || || || || ||||| Sbjct 17161491 TCAAGGGTGATCGTCTTTCCAGTGAGAGTCTTCACGAAGATTTGCAT 17161445 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| || | |||||||| | || | |||||||| || ||||| ||||| || | Sbjct 17162356 TCCACCACGAAGACGCAACACGAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGC 17162297 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | || | ||| || | || || ||||| ||||||| | |||||||| || || Sbjct 17162296 TAGGGTCCTTCCATCCTCCAATTGCTTCCCAGCAAAGATCAACCTTTGCTGATCTGGTGG 17162237 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTG-CTTGAGTTGTTCGACGGTGTCCGTACTCTCGA 127064 || |||||||||| | ||| ||| || ||| | | || | ||||| | ||| || | Sbjct 17162236 GATTCCCTCCTTGT-CTTGAATTTTTGCCTTTACATTGTCAATTGTGTCTGAACTTTCCA 17162178 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | || | || | || || || |||| ||| |||||||| |||||||| Sbjct 17162177 CCTCCAAAGTTATGGTCTTTCCTGTCAAAGTCTTTACAAAGATCTGCAT 17162129 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || || || ||||| ||||||||| ||| || || ||| || ||||| |||||| Sbjct 17146767 GTGGATTCCTTCTGAATGTTGTAATCGGCCAAGGTTCGGCCATCTTCAAGCTGCTTTCCA 17146708 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || | ||||| | ||||| || || || || |||||||||||| || || ||| Sbjct 17146707 GCAAAAATCAACCTTTGCTGGTCTGGGGGGATACCCTCCTTGTCCTGTATCTTAGCCTTC 17146648 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | ||||| | ||||| || || | || | || ||||| || || || Sbjct 17146647 ACATTGTCAATTGTGTCTGAGCTCTCAACCTCCAAAGTAATTGTCTTGCCTGTAAGTGTC 17146588 Query 127097 TTTACAAAAATCTGCAT 127113 || || ||||||||||| Sbjct 17146587 TTCACGAAAATCTGCAT 17146571 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || ||||| || || |||||||| ||| || || ||| || ||||| |||||| Sbjct 17162097 GTGGATTCTTTCTGGATGTTGTAATCAGCCAAGGTTCGGCCATCTTCAAGCTGCTTTCCA 17162038 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || | ||||| | ||||| || || || || |||||||||||| || || ||| Sbjct 17162037 GCAAAAATCAACCTTTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGTATCTTAGCCTTC 17161978 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | ||||| | ||||| || || | || | || ||||| || ||||| Sbjct 17161977 ACATTGTCAATTGTGTCTGAGCTCTCTACCTCCAAAGTAATTGTCTTGCCAGTAAGAGTC 17161918 Query 127097 TTTACAAAAATCTGCAT 127113 || || ||||||||||| Sbjct 17161917 TTCACGAAAATCTGCAT 17161901 Score = 86.0 bits (94), Expect = 6e-12 Identities = 140/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 ||||| ||||| |||||||||||||| ||| || ||| ||| || | ||| || ||| Sbjct 20998627 GTAGATTCTTTCTGAATATTGTAATCTGCCAAAGTACGACCATCCTCCAACTGCTTGCCA 20998568 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGC-TT 127035 || | || | | |||||||| || || || |||||||| ||| ||| | | ||| || Sbjct 20998567 GCAAAAATAAGCCTTTGCTGATCTGGGGGAATACCCTCCTTATCC-TGAATCTTTGCTTT 20998509 Query 127036 GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | | || | ||||| | || || ||||| | ||| | || || || || || || Sbjct 20998508 CACATTATCAATTGTGTCAGAGCTTTCCACTTCTAAGGTAATAGTCTTCCCAGTAAGTGT 20998449 Query 127096 TTTTACAAAAATCTGCATG 127114 || ||||| || |||||| Sbjct 20998448 CTTCACAAATATTTGCATG 20998430 >seq4 Length=49191682 Score = 113 bits (124), Expect = 4e-20 Identities = 150/206 (73%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 126910 ATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTG 126969 ||| | |||||||||||| |||||||| ||||| | | || | || |||| ||| Sbjct 19846652 ATGAAGCGTAGACTCTTTCTGAATATTATAATCTGCAAGTGTTCTCCCGTCTTCTAACTG 19846711 Query 126970 TTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTT 127029 |||||| ||| ||||||| ||||||||||| || || || || || ||||| |||||| Sbjct 19846712 TTTTCCGGCGAAGATCAACCGCTGCTGATCCGGTGGAATTCCTTCTTTGTCTTGGATTTT 19846771 Query 127030 CTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGG 127088 || | |||| |||| ||||| | || ||||| | || | |||||||||| Sbjct 19846772 GGCTTTCACGTTG-TCGATTGTGTCGGAGGATTCTACTTCTAGCGTTATGGTTTTGCCGG 19846830 Query 127089 TCAGAGTTTTTACAAAAATCTGCATG 127114 | || ||||| || || ||||||||| Sbjct 19846831 TTAGGGTTTTGACGAAGATCTGCATG 19846856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475458438822480