Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq55 187 3e-42 seq1 125 9e-24 seq104 109 7e-19 seq6 98.7 1e-15 seq7 96.9 4e-15 seq5 89.7 6e-13 seq4 82.4 9e-11 >seq55 Length=606834 Score = 187 bits (206), Expect = 3e-42 Identities = 387/568 (68%), Gaps = 15/568 (3%) Strand=Plus/Plus Query 102059 GTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGTTCCATG 102118 |||||| | ||| | ||||||||| | | ||| | || || | || |||| || Sbjct 249980 GTATATAAGCGATTCGGTTGAGAAGAATCGTTTGTTTCATGCTATTGAGACGATTCCTTG 250039 Query 102119 TATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCGTTCCTTTGC 102178 ||||| |||||||||||||||||| |||| ||| | ||| | |||| ||| ||||| Sbjct 250040 TATTCGTAAGAAAGCGGATTGGGCTTTGAAATGGATCGATTC---GTCGGATTCGTTTGC 250096 Query 102179 TGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGC 102238 ||| || || | || ||||| || ||||| ||||| || ||||||||| ||||| || Sbjct 250097 TGAAAGAATCGTTGCTTTTGCTTGCGTTGAAGGTATTTTTTTCTCTGGTAGTTTCTGTGC 250156 Query 102239 TATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTAT 102298 |||| |||||| || || || ||| | ||||| ||| | || || ||||||||||| Sbjct 250157 AATTTTTTGGCTTAAAAAACGTGGTTTAATGCCTGGTTTAACTTTTTCAAACGAGCTTAT 250216 Query 102299 CTCTCGTGACGAGGGACTCCACCAAGAGTTTGC--GGTGGAACTTTTCAAATTATTGCGT 102356 || |||||||| ||||| || || ||||| | | | |||| | ||||| | Sbjct 250217 TTCGCGTGACGAAGGACTTCATTGTGATTTTGCTTGTTTG--CTTTATTCACTATTGAGG 250274 Query 102357 ATTAAACCAACGACTGAG--ACTA-TTCATTCTATTGTTAAGGAAGCCGTTGAGATTGAG 102413 | ||||| || |||| | | | | ||||| | || || |||||||||||| Sbjct 250275 AATAAAC---TGAGTGAGGAGCGAGTGAAGAAGATTGTGAGTGATGCGGTTGAGATTGAG 250331 Query 102414 AAGGGATTCATATTGGATGCCCTTCCATGCGCTCTCATCGGTATGAATTCTGAAAAGATG 102473 | || || | | || || ||||| ||||| | |||| |||||| ||| |||| Sbjct 250332 AGGGAGTTTGTTTGTGACGCGCTTCCGTGCGCGTTGGTCGGGATGAATGGTGATTTGATG 250391 Query 102474 TCCGAATATATTGAGTATGTATCTGATAGATTGTTGAAGCAGATCGG-GGTGCCTCCAAT 102532 | | |||||||||| || | ||||| |||||| || | || ||| | | Sbjct 250392 AGCCAGTATATTGAGTTCGTTGCCGATAGGTTGTTGGGTGAGCTTGGTTGTG-GGAAAGT 250450 Query 102533 TTGGAACTCCAAGAATCCATTTGACTTCATGGAGAACATTAGCCTCGACGGGAAGACAAA 102592 || || ||||||| ||||| | |||||| ||| || | |||||||| || Sbjct 250451 TTATAATGTTCAGAATCCTTTTGATTGGATGGAGTTGATTTCTCTTCAAGGGAAGACTAA 250510 Query 102593 CTTCTTCGAAAAGAGGGTTGGGGACTAT 102620 ||| || || ||| | |||||||| ||| Sbjct 250511 CTTTTTTGAGAAGCGCGTTGGGGAATAT 250538 Score = 187 bits (206), Expect = 3e-42 Identities = 387/568 (68%), Gaps = 15/568 (3%) Strand=Plus/Plus Query 102059 GTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGTTCCATG 102118 |||||| | ||| | ||||||||| | | ||| | || || | || |||| || Sbjct 258663 GTATATAAGCGATTCGGTTGAGAAGAATCGTTTGTTTCATGCTATTGAGACGATTCCTTG 258722 Query 102119 TATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCGTTCCTTTGC 102178 ||||| |||||||||||||||||| |||| ||| | ||| | |||| ||| ||||| Sbjct 258723 TATTCGTAAGAAAGCGGATTGGGCTTTGAAATGGATCGATTC---GTCGGATTCGTTTGC 258779 Query 102179 TGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGC 102238 ||| || || | || ||||| || ||||| ||||| || ||||||||| ||||| || Sbjct 258780 TGAAAGAATCGTTGCTTTTGCTTGCGTTGAAGGTATTTTTTTCTCTGGTAGTTTCTGTGC 258839 Query 102239 TATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTAT 102298 |||| |||||| || || || ||| | ||||| ||| | || || ||||||||||| Sbjct 258840 AATTTTTTGGCTTAAAAAACGTGGTTTAATGCCTGGTTTAACTTTTTCAAACGAGCTTAT 258899 Query 102299 CTCTCGTGACGAGGGACTCCACCAAGAGTTTGC--GGTGGAACTTTTCAAATTATTGCGT 102356 || |||||||| ||||| || || ||||| | | | |||| | ||||| | Sbjct 258900 TTCGCGTGACGAAGGACTTCATTGTGATTTTGCTTGTTTG--CTTTATTCACTATTGAGG 258957 Query 102357 ATTAAACCAACGACTGAG--ACTA-TTCATTCTATTGTTAAGGAAGCCGTTGAGATTGAG 102413 | ||||| || |||| | | | | ||||| | || || |||||||||||| Sbjct 258958 AATAAAC---TGAGTGAGGAGCGAGTGAAGAAGATTGTGAGTGATGCGGTTGAGATTGAG 259014 Query 102414 AAGGGATTCATATTGGATGCCCTTCCATGCGCTCTCATCGGTATGAATTCTGAAAAGATG 102473 | || || | | || || ||||| ||||| | |||| |||||| ||| |||| Sbjct 259015 AGGGAGTTTGTTTGTGACGCGCTTCCGTGCGCGTTGGTCGGGATGAATGGTGATTTGATG 259074 Query 102474 TCCGAATATATTGAGTATGTATCTGATAGATTGTTGAAGCAGATCGG-GGTGCCTCCAAT 102532 | | |||||||||| || | ||||| |||||| || | || ||| | | Sbjct 259075 AGCCAGTATATTGAGTTCGTTGCCGATAGGTTGTTGGGTGAGCTTGGTTGTG-GGAAAGT 259133 Query 102533 TTGGAACTCCAAGAATCCATTTGACTTCATGGAGAACATTAGCCTCGACGGGAAGACAAA 102592 || || ||||||| ||||| | |||||| ||| || | |||||||| || Sbjct 259134 TTATAATGTTCAGAATCCTTTTGATTGGATGGAGTTGATTTCTCTTCAAGGGAAGACTAA 259193 Query 102593 CTTCTTCGAAAAGAGGGTTGGGGACTAT 102620 ||| || || ||| | |||||||| ||| Sbjct 259194 CTTTTTTGAGAAGCGCGTTGGGGAATAT 259221 >seq1 Length=48359943 Score = 125 bits (138), Expect = 9e-24 Identities = 308/461 (67%), Gaps = 12/461 (3%) Strand=Plus/Minus Query 15918 TCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATACCTGTTTCGTTATCAAAA 15977 || || || ||| | | || ||||| || ||||||| || || || | ||||| Sbjct 19053855 TCGAGAATGTCAGCCCTGTTGGTTGCTGCAATGACAATGATTCCGGTATTACCCTCAAAT 19053796 Query 15978 CCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATA 16037 |||||||| ||||||||||| ||||| | || ||||||| |||||||||| || | Sbjct 19053795 CCATCCATTTCTGTCAAAAGTTGGTTGAGGGTCTGTTCCCTTTCATCATTCCCT---CCA 19053739 Query 16038 CCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCAT 16094 ||| |||| | |||||| |||| || ||||| || ||||||| || || || || Sbjct 19053738 CCAATTCCAGTGCCTCGTTGCCTTCCTACAGCATCGATTTCATCAACAAAAACAATACAA 19053679 Query 16095 GGTTGATTTTCGCGAGCGACTTC--AAAGAGATCCCGTACACGCTTGGCGCCCACACCAA 16152 || ||| || || |||| || | ||| || || || || || ||||||| Sbjct 19053678 GGAGCATTCTCTTTTGC--CTTCTTGAATAAATCTCGAACTCGAGAAGCACCAACACCAA 19053621 Query 16153 CAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCC 16211 |||||||||| ||||| | | | | | |||| || || || || | |||||| Sbjct 19053620 CAAACATCTCAACAAACTCAGAACCTG-AGATTGAGAAAAATGGAACGCCTGCTTCACCA 19053562 Query 16212 GCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCT 16271 ||||| || ||| | | ||||| || || || || ||| |||| || | ||| Sbjct 19053561 GCAATAGCCTTGGCTAATAACGTCTTCCCAGTCCCCGGTGGACCTACGAGAAGAACTCCT 19053502 Query 16272 CGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATC 16331 |||||| || ||| | || | | |||||||| | |||||||| ||||| | | Sbjct 19053501 TTTGGAATGCGAGCACCAATAGCAGTGAACCTCTCAGGCTTTTTAAGAAACTCCACTACC 19053442 Query 16332 TCTTCCAATTCATCTTTGGCGGCGTCAATCCCCTCAACATC 16372 || || || | |||||| | || | ||| ||||||| Sbjct 19053441 TCCATAAAATCTTGTTTGGCTTCATCCACCCCAGCAACATC 19053401 >seq104 Length=244920 Score = 109 bits (120), Expect = 7e-19 Identities = 150/208 (72%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 102112 TTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCGTT 102171 |||| ||||||| |||||||||||||||||| |||| ||| | ||| | |||| || Sbjct 172285 TTCCTTGTATTCGTAAGAAAGCGGATTGGGCTTTGAAATGGATCGATTC---GTCGATTT 172229 Query 102172 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 102231 || | ||| || || | || ||||| || ||||| ||||| || |||||| || | Sbjct 172228 GATT-GTTGAAAGAATCGTTGCTTTTGCTTGCGTTGAAGGTATTTTTTTCTCTAGTAGTT 172170 Query 102232 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 102291 | || || || | |||||| || || || ||| | |||| ||| | || || |||| Sbjct 172169 TATGTGCGATATTTTGGCTTAAAAAACGTGGTTTAATGCATGGTTTAACTTTTTCAAACG 172110 Query 102292 AGCTTATCTCTCGTGACGAGGGACTCCA 102319 ||||||| | ||||||| ||||| || Sbjct 172109 AGCTTATTTTGTGTGACGAAGGACTTCA 172082 >seq6 Length=59463898 Score = 98.7 bits (108), Expect = 1e-15 Identities = 175/254 (69%), Gaps = 6/254 (2%) Strand=Plus/Minus Query 15918 TCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATACCTGTTTCGTTATCAAAA 15977 ||||| || || | | || ||||| || | ||||| ||||| || | ||||| Sbjct 13715568 TCAAGAATGTCGGCCCTGTTAGTTGCTGCAACGACAATGATACCAGTATTACCCTCAAAT 13715509 Query 15978 CCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATA 16037 |||||||| ||||||||||| || || | |||||||| | ||||||||| || | Sbjct 13715508 CCATCCATTTCTGTCAAAAGTTGATTGAGGGTTTGTTCTCTCTCATCATTCCCT---CCA 13715452 Query 16038 CCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCAT 16094 ||| || | | | ||| |||| || |||||||| ||||||| ||||| ||||| Sbjct 13715451 CCAATTCCTGTCCCTCTTTGTCTTCCAACAGCATCAATTTCATCAACAAAGACAATGCAA 13715392 Query 16095 GGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACA 16154 || ||| || || || || | ||| || ||||| || || | ||||||| Sbjct 13715391 GGAGCATTCTCTTTGGCCTTTTTGAATAAATCACGGACACGAGAAGCACCGATACCAACA 13715332 Query 16155 AACATCTCCACAAA 16168 |||||||| ||||| Sbjct 13715331 AACATCTCAACAAA 13715318 >seq7 Length=48961560 Score = 96.9 bits (106), Expect = 4e-15 Identities = 103/135 (76%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 184557 TTGGAATA--GGTGCAAATGATGTTGCCAATGCATTCGCAACATCAGTTGGATCAGGTGC 184614 |||||| | ||||| ||||||||||| |||||| | | ||||||||||| |||||||| Sbjct 18658698 TTGGAACATTGGTGCTAATGATGTTGCTAATGCAATGGGGACATCAGTTGGGTCAGGTGC 18658639 Query 184615 TTTGAAAGTTAAGCACGCAGTGCCACTCGCGGCTGTGTGTGAGTTTTCGGGGTCTCTGTT 184674 |||| | ||| ||| || ||| || ||||||| |||||||| || | |||| Sbjct 18658638 CTTGACACTTAGGCAAGCTGTGTTGACAGCTGCTGTGTTGGAGTTTTCAGGAGCATTGTT 18658579 Query 184675 TATGGGAAGTCATGT 184689 ||||||| |||||| Sbjct 18658578 GATGGGAACTCATGT 18658564 >seq5 Length=48169137 Score = 89.7 bits (98), Expect = 6e-13 Identities = 307/472 (65%), Gaps = 14/472 (3%) Strand=Plus/Plus Query 15887 ATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCGGC 15946 |||||| | || || | ||| | ||| |||||| | |||| | ||| || || || Sbjct 31480364 ATCAAACCTTCCAGGTCTAAGCAACGCCGAATCAAGAACATCAGGTCTATTAGTAGCAGC 31480423 Query 15947 GATGACAACAATACCTGTTTCGTTATCAAAACCATCCATCTCTGTCAAAAGCTGGTTAAT 16006 | |||| || ||| | | | ||| ||||||||||| ||||| | ||| ||||| Sbjct 31480424 CAAAACAATAACACCAGAATTACCAGAAAATCCATCCATCTCCGTCAACAACTGATTAAT 31480483 Query 16007 AGTTTGTTCCCGTTCATCATTCGCTGGCATACCA---CCAGCACTGCGTTGCTTTCCCAC 16063 ||||||||||| || |||||| | |||| ||||| | | || | || || Sbjct 31480484 AGTTTGTTCCCTCTCGTCATTCCC---ACCACCAAGTCCAGCTCCTCTCTGTCTCCCAAC 31480540 Query 16064 GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACT--TCAAAG 16121 |||||||| ||||||||||| || || || || ||||| || | ||||| Sbjct 31480541 AGCATCAATTTCATCAATGAAAACAATACAAGG--CGCTTTCGACTTCGCTTTCTCAAAC 31480598 Query 16122 AGATCCCGTACACGCTTG--GCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGG 16179 | ||||| || || || | || || ||||||||||||| |||||||| | | || | Sbjct 31480599 AAATCCC-TA-ACCCTAGAAGCACCAACACCAACAAACAGTTCCACAAATTCCGAAGCCG 31480656 Query 16180 AACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTAC 16239 ||| | ||| || | | |||||| || | || || || | || || || | Sbjct 31480657 CACACGAAAAGAACGGTGTACCGGCTTCACCGGCTACCGCCCGTGCCAATAGTGTTTTTC 31480716 Query 16240 CCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTTCCAAAGT 16299 | || || || ||| | | || ||| |||||||| || || | || || Sbjct 31480717 CGGTTCCCGGTGGCCCCACCAAAAGACATCCTTTCGGAATCTTAGCACCCAATGCAGTGT 31480776 Query 16300 ATCTCTCAGGTTGCTTAAGAAAATCCACAATCTCTTCCAATTCATCTTTGGC 16351 | | ||||| | ||| | |||||| |||| |||| |||||| ||| || Sbjct 31480777 ACTTATCAGGATTCTTCAAAAAATCAACAACTTCTTGTAATTCAAGTTTCGC 31480828 >seq4 Length=49191682 Score = 82.4 bits (90), Expect = 9e-11 Identities = 112/152 (74%), Gaps = 6/152 (4%) Strand=Plus/Plus Query 36145 ACCAACCAACCCATATTCGGCTTCAAAGGCGGCGGCAGAAATGATTGTGATGTCATA-CA 36203 |||||| || || ||||| ||| |||| || | || |||||| | || ||| | || || Sbjct 41131103 ACCAACAAATCCTTATTCAGCTACAAAAGCAGGTGCTGAAATGTTGGTTATGGCTTATCA 41131162 Query 36204 TTGAATCATTTAATATG--AATATTAAAATTTTAAGATGTAACAATGTGTATGGTCCGAA 36261 | || || | | | | |||| ||| || | ||| | || ||||| |||||||| || Sbjct 41131163 TAGA-TCTTATGGTCTTCCAATAATAACATCT--AGAGGAAATAATGTTTATGGTCCTAA 41131219 Query 36262 TCAATATCCAGAAAAACTCATTCCAAAGTTTA 36293 ||||||||| |||||||| |||| ||||||| Sbjct 41131220 TCAATATCCTGAAAAACTTGTTCCTAAGTTTA 41131251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620687099611440