Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1 132 6e-26 seq5 107 2e-18 seq6 104 3e-17 seq4 91.5 2e-13 >seq1 Length=48359943 Score = 132 bits (146), Expect = 6e-26 Identities = 307/459 (67%), Gaps = 8/459 (2%) Strand=Plus/Minus Query 9225 TCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAAA 9284 || || || ||| | | || || || || ||||||| || || || | | ||||| Sbjct 19053855 TCGAGAATGTCAGCCCTGTTGGTTGCTGCAATGACAATGATTCCGGTATTACCCTCAAAT 19053796 Query 9285 CCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATA 9344 |||||||| ||||||||||||||||| | || ||||||| |||||||||| || | Sbjct 19053795 CCATCCATTTCTGTCAAAAGTTGGTTGAGGGTCTGTTCCCTTTCATCATTCCCT---CCA 19053739 Query 9345 CCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACAT 9401 ||| |||| | |||||| |||| || ||||| || ||||||| || |||||||| Sbjct 19053738 CCAATTCCAGTGCCTCGTTGCCTTCCTACAGCATCGATTTCATCAACAAAAACAATACAA 19053679 Query 9402 GGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACA 9461 || ||| || || | | || | ||| ||||| | || || ||||||||| Sbjct 19053678 GGAGCATTCTCTTTTGCCTTCTTGAATAAATCTCGAACTCGAGAAGCACCAACACCAACA 19053619 Query 9462 AACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGC 9520 |||||||| ||||| | | | | | |||| || || || || | |||||| || Sbjct 19053618 AACATCTCAACAAACTCAGAACCTG-AGATTGAGAAAAATGGAACGCCTGCTTCACCAGC 19053560 Query 9521 AATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCG 9580 ||| || ||| | | ||||| || || || || ||| |||| || | || Sbjct 19053559 AATAGCCTTGGCTAATAACGTCTTCCCAGTCCCCGGTGGACCTACGAGAAGAACTCCTTT 19053500 Query 9581 TGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCACAATCTC 9640 |||||| || ||| | || | | |||||||| | || ||||| ||||| | ||| Sbjct 19053499 TGGAATGCGAGCACCAATAGCAGTGAACCTCTCAGGCTTTTTAAGAAACTCCACTACCTC 19053440 Query 9641 TTCCAATTCATCTTTGGCGGCGTCAATCCCCTCAACATC 9679 || || | |||||| | || | ||| ||||||| Sbjct 19053439 CATAAAATCTTGTTTGGCTTCATCCACCCCAGCAACATC 19053401 >seq5 Length=48169137 Score = 107 bits (118), Expect = 2e-18 Identities = 198/287 (69%), Gaps = 10/287 (3%) Strand=Plus/Plus Query 9194 ATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCGGC 9253 |||||| | || || | ||| | ||| |||||| | |||| | ||| || || || Sbjct 31480364 ATCAAACCTTCCAGGTCTAAGCAACGCCGAATCAAGAACATCAGGTCTATTAGTAGCAGC 31480423 Query 9254 GATGACAACAATACCTGTTTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAAT 9313 | |||| || ||| | | | | ||| ||||||||||| ||||| | || ||||| Sbjct 31480424 CAAAACAATAACACCAGAATTACCAGAAAATCCATCCATCTCCGTCAACAACTGATTAAT 31480483 Query 9314 AGTTTGTTCCCGTTCATCATTCGCTGGCATACCA---CCAGCACTGCGTTGCTTTCCCAC 9370 ||||||||||| || |||||| | |||| ||||| | | || | || || Sbjct 31480484 AGTTTGTTCCCTCTCGTCATTCCC---ACCACCAAGTCCAGCTCCTCTCTGTCTCCCAAC 31480540 Query 9371 GGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATT--TCAAAG 9428 |||||||| ||||||||||| |||||||| || ||||| || || ||||| Sbjct 31480541 AGCATCAATTTCATCAATGAAAACAATACAAGG--CGCTTTCGACTTCGCTTTCTCAAAC 31480598 Query 9429 AGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAA 9475 | ||| | |||||| || || ||||||||||||| |||||||| Sbjct 31480599 AAATCCCTAACCCTAGAAGCACCAACACCAACAAACAGTTCCACAAA 31480645 >seq6 Length=59463898 Score = 104 bits (114), Expect = 3e-17 Identities = 176/254 (69%), Gaps = 6/254 (2%) Strand=Plus/Minus Query 9225 TCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAAA 9284 ||||| || || | | || || || || | ||||| ||||| || | | ||||| Sbjct 13715568 TCAAGAATGTCGGCCCTGTTAGTTGCTGCAACGACAATGATACCAGTATTACCCTCAAAT 13715509 Query 9285 CCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATA 9344 |||||||| |||||||||||||| || | |||||||| | ||||||||| || | Sbjct 13715508 CCATCCATTTCTGTCAAAAGTTGATTGAGGGTTTGTTCTCTCTCATCATTCCCT---CCA 13715452 Query 9345 CCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACAT 9401 ||| || | | | ||| |||| || |||||||| ||||||| |||||||| || Sbjct 13715451 CCAATTCCTGTCCCTCTTTGTCTTCCAACAGCATCAATTTCATCAACAAAGACAATGCAA 13715392 Query 9402 GGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACA 9461 || ||| || ||| ||| || | ||| || || | || || | ||||||| Sbjct 13715391 GGAGCATTCTCTTTGGCCTTTTTGAATAAATCACGGACACGAGAAGCACCGATACCAACA 13715332 Query 9462 AACATCTCCACAAA 9475 |||||||| ||||| Sbjct 13715331 AACATCTCAACAAA 13715318 >seq4 Length=49191682 Score = 91.5 bits (100), Expect = 2e-13 Identities = 240/360 (67%), Gaps = 11/360 (3%) Strand=Plus/Plus Query 25405 CACTTTGCCGCACAAAGTCATGTAGACAATTCATTTACAAGTCCTCTTGGGTTTACTTTA 25464 || ||||| || |||| |||||| |||||||||||| || | | | || || | Sbjct 41130897 CATTTTGCTGCTCAAACTCATGTTGACAATTCATTTGGAAACTCAATGGAATTCACATAT 41130956 Query 25465 GACAATACATATGGTACACATACACTCGTTGAAGTCTGTAGGCGTCACATACCAAATGTT 25524 |||| | ||| || |||||| || | |||| || ||| | ||| | |||| Sbjct 41130957 AACAACATATACGGAACACATGTTCTTCTAGAAGCATGCAGGGCT-ACAAATTG--TGTT 41131013 Query 25525 GAA---TTTATACATTTTAGTACAGATGAAGTATACGGTGAATCAAAAACAGAT---GAA 25578 || || || ||| ||||||| |||||||| || |||||| | | |||| || Sbjct 41131014 AAAAGGTTCATTCATGTTAGTACTGATGAAGTTTATGGTGAAACTGATTTAGATACTGAT 41131073 Query 25579 CCTTTCACCGAAGACACAGGGGTACTTAGACCAACAAATCCATATTCAGCATCAAAAGCG 25638 | | | || ||| |||| |||||||||||| |||||||| ||||||| Sbjct 41131074 ATTGGTAACATTGAAACATCTCAACTTTTACCAACAAATCCTTATTCAGCTACAAAAGCA 41131133 Query 25639 GCGGCCGAAATGATAGTCCGTTCATAT-ATAGAATCATTTGATATGAATATCAAAATAAT 25697 | || |||||| | || | ||| ||||| || | || | | || | || | Sbjct 41131134 GGTGCTGAAATGTTGGTTATGGCTTATCATAGA-TCTTATGGTCTTCCAATAATAACATC 41131192 Query 25698 TCGCTGTAATAATGTTTATGGTCCAAATCAATACCCGGAGAAACTCATTCCAAAGTTTAT 25757 | | | ||||||||||||||||| |||||||| || || ||||| |||| |||||||| Sbjct 41131193 TAGAGGAAATAATGTTTATGGTCCTAATCAATATCCTGAAAAACTTGTTCCTAAGTTTAT 41131252 Score = 89.7 bits (98), Expect = 6e-13 Identities = 134/190 (71%), Gaps = 8/190 (4%) Strand=Plus/Minus Query 9372 GCATCAATCTCATCAATGAAGACAATACATGGTTGA----TTTTCGCGGGCGATTTCAAA 9427 |||||||||||||||||||| | ||||| || | ||||||| | || ||| Sbjct 25250380 GCATCAATCTCATCAATGAAAATTATACAAGGCGAACTCTTTTTCGCAGCTGA----AAA 25250325 Query 9428 GAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA 9487 ||||| | |||||||||||| || ||||||||||||||||| |||| | | Sbjct 25250324 AAGATCCCTAACCCTTTTGGCACCAACACCAACAAACATCTCTTCAAATTCACTTCCACT 25250265 Query 9488 ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACC 9547 ||| | ||| || ||| || ||||| ||||| |||| ||| | | |||||||| Sbjct 25250264 ACACGAAAAGAAAGGAACACCAGCCTCACCAGCAATAGCTCTGGCCAACATCGTCTTACC 25250205 Query 9548 CGTACCTGGC 9557 ||||| ||| Sbjct 25250204 AGTACCAGGC 25250195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589928240085480