Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq2 109 4e-19 seq4 100 2e-16 seq6 96.9 2e-15 seq5 96.9 2e-15 >seq2 Length=36634854 Score = 109 bits (120), Expect = 4e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||| | ||||| || ||| ||||| ||||| ||||| | || | || | || || Sbjct 8273566 AACAAGGTGAAGAGTTGATTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGGCCGTCTTC 8273507 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 || ||||||||||| || || |||||||| ||||| | || | ||| |||||||| Sbjct 8273506 GAGTTGTTTTCCGGCGAAGATGAGTCGTTGTTGGTCCGGTGGAATCCCTTCCTTGTCTTG 8273447 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 || || ||||||| | || | ||| || ||||| |||| ||| || ||||| Sbjct 8273446 GATTTTGGCTTTGACGTTGTCGATTGTGTCAGAGGATTCAACCTCGAGGGTGATTGTTTT 8273387 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCATATTCG 34986 ||||| || || ||||| ||||||||||| |||| Sbjct 8273386 ACCCGTTAGGGTTTTCACGAAGATCTGCATCTTCG 8273352 >seq4 Length=49191682 Score = 100 bits (110), Expect = 2e-16 Identities = 166/240 (69%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 34742 TATCCAATCATTTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAAT 34801 |||| | ||||||| || | | ||| | ||| | ||||| ||| ||| |||||||| Sbjct 19846388 TATCTATACATTTCCACCACGGAGCCTAAGAACAAGGTGAAGTGTAGATTCCTTCTGAAT 19846447 Query 34802 GTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTG 34861 ||||| || | ||| | ||| |||| || || ||||| || ||||| || || || || Sbjct 19846448 ATTATAATCAGCAAGAGTGCGTCCATCTTCAAGTTGTTTACCAGCAAAAATAAGACGCTG 19846507 Query 34862 CTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTC 34921 || || | || | |||||||| || ||||||| ||| || | |||| || Sbjct 19846508 TTGATCCGGTGGAATTCCCTCCTTATCTTGAATCTTCGCTTTCACATTATCAATCGTATC 19846567 Query 34922 ACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | ||| || || | || || || || ||||| || ||||||||||| |||||||| Sbjct 19846568 AGAACTCTCCACCTCCAAAGTAATCGTCTTCCCCGTTAGCGTCTTCACAAAAATCTGCAT 19846627 Score = 98.7 bits (108), Expect = 6e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | | | | || |||| || ||||| |||||||| || Sbjct 14093124 TCCTTCTGGATGTTGTAGTCAGCTAAGGTGCGGCCATCTTCAAGCTGCTTTCCGGCGAAG 14093183 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || |||| ||||||||| | || | || |||||||| ||||| || ||| Sbjct 14093184 ATGAGTCTCTGCTGGTCTGGTGGGATTCCTTCCTTGTCTTGGATCTTAGCCTTCACGTTG 14093243 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | ||| | ||||| |||| || ||||| || || ||||| ||||||||| Sbjct 14093244 TCGATGGTGTCAGAGCTTTCAACTTCGAGAGTGATGGTCTTACCGGTGAGGGTCTTCACA 14093303 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 14093304 AAGATCTGCATA 14093315 >seq6 Length=59463898 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTC--CGAAAGGCTTCGTTCATCAT 34830 ||||| |||| ||| |||||||||||| || || || | |||| |||| |||| | Sbjct 17161653 ACCAAATGAAGGGTGGATTCTTTCTGAATATTGTAATCTGCTAAAG--TTCGGCCATCCT 17161596 Query 34831 CCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGC 34890 | |||||||| || ||||| || || | || |||||| | || | | ||||||||| Sbjct 17161595 CAAGCTGTTTGCCAGCAAAAATGAGCCTCTGTTGGTCTGGTGGAATGCTCTCCTTGTCCT 17161536 Query 34891 TAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 |||||| ||||| | || | ||| | || || || | ||| || || | Sbjct 17161535 GAATCTTGGCCTTGACATTGTCAATAGTATCAGAGCTTTCCACCTCAAGGGTGATCGTCT 17161476 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 |||| |||||||||||||| ||||| ||||| Sbjct 17161475 TTCCAGTGAGAGTCTTCACGAAGATTTGCAT 17161445 Score = 95.1 bits (104), Expect = 8e-15 Identities = 151/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 34766 CCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTC 34825 ||||||||||||||| | || ||| ||||| || ||||| || | || | ||| | Sbjct 20998418 CCTCAAAACCAAGTGCAAAGTAGATTCCTTCTGGATATTATAATCAGCCAGAGTACGTCC 20998359 Query 34826 ATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTT 34885 ||| |||| ||| || |||||||| ||||| | ||||| ||| | || | ||||| || Sbjct 20998358 ATCCTCCAACTGCTTGCCGGCAAAAATTAGCCTCTGCTGATCTGGAGGAATACCCTCTTT 20998299 Query 34886 GTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTAT 34945 ||| ||| ||| || || |||| | ||| ||||| || | ||||| Sbjct 20998298 GTCCTGAATTTTCGCCTTCACATTATCTATTGTATCAGAACTTTCAACCTCCAAAGTTAT 20998239 Query 34946 GGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || ||||| || || ||||| ||||| || |||||| Sbjct 20998238 TGTCTTTCCGGTAAGGGTCTTGACAAAAATTTGCATA 20998202 Score = 93.3 bits (102), Expect = 3e-14 Identities = 152/215 (71%), Gaps = 12/215 (6%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTC--CGAAAGGCTTCGTTCATCAT 34830 ||||| || | ||| |||||||||||||| || || | |||| |||| |||| | Sbjct 17146095 ACCAAATGGAGGGTGGACTCTTTCTGAATGTTGTAATCTGCCAAAG--TTCGGCCATCTT 17146038 Query 34831 CCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGC 34890 | |||||||| || ||||| || || | || |||||| | || | ||||| ||||| Sbjct 17146037 CAAGCTGTTTGCCAGCAAAGATGAGCCTCTGTTGGTCTGGTGGAATGCCCTCTTTGTCCT 17145978 Query 34891 TAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATG 34946 |||||| || || || | ||||| ||| | ||| || || | || ||| Sbjct 17145977 GAATCTTAGCCTTTAC--AT--TGTCGATGGTATCAGAGCTCTCCACCTCAAGAGTGATG 17145922 Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || ||||| ||||||||||||||||| || ||||| Sbjct 17145921 GTCTTTCCGGTGAGAGTCTTCACAAATATTTGCAT 17145887 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||||||||| | | || | ||||| ||| ||| ||||||||||| || || | Sbjct 17146797 CCTCCCCTCAAACGAAGGACAAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAATCGGCC 17146738 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 | | |||| |||| || ||||| ||||| ||||| || | | |||||||||| | || Sbjct 17146737 AAGGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGGGGG 17146678 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||||||||| ||||| || || | || | || | |||||| Sbjct 17146677 ATACCCTCCTTGTCCTGTATCTTAGCCTTCACATTGTCAATTGTGTCTGAGCTCTCAACC 17146618 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || | || || || || || || || |||||||| || ||||||||| Sbjct 17146617 TCCAAAGTAATTGTCTTGCCTGTAAGTGTCTTCACGAAAATCTGCATA 17146570 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 |||||||| ||| | || |||||||| ||||| || || | | | |||| |||| Sbjct 17161885 CAAAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGCCAAGGTTCGACCATC 17161826 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || ||||||||||| ||||| || || | ||||| || | || | ||||| ||||| Sbjct 17161825 TTCAAGCTGTTTTCCAGCAAAGATGAGCCTCTGCTGATCAGGTGGGATACCCTCTTTGTC 17161766 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 ||||| ||||| | || | ||| |||||| || | ||| ||||| Sbjct 17161765 TTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAACTCTCAACTTCAAGGGTGATGGT 17161706 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||||| ||||| ||||| || ||||| ||||| Sbjct 17161705 CTTTCCTGTGAGGGTCTTGACGAAGATTTGCAT 17161673 Score = 86.0 bits (94), Expect = 4e-12 Identities = 139/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||||||||| | |||| | | | |||| |||| || || || ||||| Sbjct 17146989 TCCTTCTGAATGTTATAGTCAGCAAGGGTCCTTCCATCCTCCAATTGCTTCCCAGCAAAG 17146930 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | | ||||| ||| | || | || |||||||| || || |||||| || Sbjct 17146929 ATCAACCTCTGCTGATCTGGTGGGATTCCTTCCTTGTCCTGTATTTTTGCTTTGAC--AT 17146872 Query 34911 GCTATCGAT--TCACCGGCC--TCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 ||||||| | | | | || || || | || ||||| ||||| || | |||||| Sbjct 17146871 --TATCGATTGTGTCTGAACTTTCTACCTCCAAAGTAATGGTCTTTCCTGTCAAAGTCTT 17146814 Query 34967 CACAAAGATCTGCATA 34982 |||||||||||||||| Sbjct 17146813 CACAAAGATCTGCATA 17146798 Score = 84.2 bits (92), Expect = 1e-11 Identities = 144/205 (70%), Gaps = 8/205 (4%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||| ||||| ||||| | || | || | || |||| ||| |||||||| || Sbjct 9515672 TTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGGCCGTCTTCCAACTGCTTTCCGGCGAA 9515731 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || || || |||||| | || | || |||||||| ||||| |||||| | Sbjct 9515732 GATGAGACGCTGTTGGTCTGGTGGAATTCCTTCCTTGTCTTGGATCTTTGCTTTGAC--A 9515789 Query 34910 TGCTATCGATTCAC-CGGC---CTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCT 34965 | | |||||| ||| ||| || |||| ||| || || || ||||| || || | Sbjct 9515790 T--TGTCGATTGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTTACCCGTTAGGGTTT 9515847 Query 34966 TCACAAAGATCTGCATATTCGTAGA 34990 |||| ||||||||||| || || || Sbjct 9515848 TCACGAAGATCTGCATCTTGGTGGA 9515872 Score = 82.4 bits (90), Expect = 5e-11 Identities = 149/216 (69%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 34770 AAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCA 34829 ||||||||||||| |||| || || || |||||||| || | ||| | | | |||| Sbjct 20998186 AAAACCAAGTGAAGTGTGGACTCCTTTTGGATGTTATAATCGGCAAGAGTCCTTCCATCT 20998127 Query 34830 TCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34889 || |||||||| || ||||| || || | ||||| ||| | || | |||||||| || Sbjct 20998126 TCAAGCTGTTTACCAGCAAAGATAAGCCTCTGCTGATCTGGTGGGATACCCTCCTTATCT 20998067 Query 34890 CTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTAT 34945 |||||| ||| || || |||| || || ||| || || | || || Sbjct 20998066 TGAATCTTGGCTTTCAC--AT--TATCAATAGTATCTGAACTCTCTACCTCCAAAGTAAT 20998011 Query 34946 GGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || ||||| || | |||||| ||||| || ||||| Sbjct 20998010 AGTCTTTCCTGTCAAAGTCTTAACAAAAATTTGCAT 20997975 >seq5 Length=48169137 Score = 96.9 bits (106), Expect = 2e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 34766 CCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTC 34825 ||| | ||| | ||||| ||| ||| |||||||||||||| || | ||| ||| | | Sbjct 36920953 CCTGAGAACAAGGTGAAGTGTAGATTCCTTCTGAATGTTATAATCAGCAAGAGTTCTTCC 36920894 Query 34826 ATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTT 34885 ||| || ||||| || || |||||||| | || || || || | || | ||||| || Sbjct 36920893 ATCCTCAAGCTGCTTACCAGCAAATATCAAACGCTGTTGATCCGGTGGAATTCCCTCTTT 36920834 Query 34886 GTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTAT 34945 || ||||||| ||| ||| | || | ||| |||||| || | ||| || Sbjct 36920833 ATCCTGAATCTTCGCTTTCACGTTATCAATAGTATCAGAACTCTCAACCTCCAAGGTGAT 36920774 Query 34946 GGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||||||||| || || || || || || |||||||| Sbjct 36920773 GGTTTTTCCGGTTAGGGTTTTGACGAAAATCTGCAT 36920738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324605402224056