Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq55 176 5e-39 seq104 109 7e-19 seq7 82.4 9e-11 >seq55 Length=606834 Score = 176 bits (194), Expect = 5e-39 Identities = 356/526 (68%), Gaps = 7/526 (1%) Strand=Plus/Minus Query 37173 AAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTT 37232 ||||| |||||||||||||| | ||||| || | || | || || ||||| ||| Sbjct 250255 AAACAAGCAAAATCACAATGAAGTCCTTCGTCACGCGAAATAAGCTCGTTTGAAAAAGTT 250196 Query 37233 AATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAG 37292 || || ||||||||||| | |||||||| |||||| ||||| ||| ||||| || Sbjct 250195 AAACCAGGCATTAAACCACGTTTTTTAAGCCAAAAAATTGCACAGAAACTACCAGAGAAA 250136 Query 37293 AAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAG--TTGAACTATAAT 37350 |||||||||||||| ||||| || || | | | | | || | | || | || Sbjct 250135 AAAATACCTTCAACGCAAGCAAAAGCAACGATTCTTTCAGCAAACGAATCCGACGA--AT 250078 Query 37351 CAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTG 37410 | |||||||| | |||||| || || || ||| ||| || ||||| | Sbjct 250077 CG---ATCCATTTCAAAGCCCAATCCGCTTTCTTACGAATACAAGGAATCGTCTCAATAG 250021 Query 37411 CTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTAT 37470 | | || | | || || || | ||| ||||||| || |||| || | ||||| Sbjct 250020 CATGAAACAAACGATTCTTCTCAACCGAATCGCTTATATACGTTTCAAGAAGGAGACTAT 249961 Query 37471 ACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAG 37530 |||||||||| || ||||| ||||| || || |||||||| |||||| | || || | Sbjct 249960 ACATTTCAGAATGTATATTCTCAATCGCGATTTGAAAACCGTAAAAAGCACGCGCCTCTG 249901 Query 37531 ATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAG 37590 | | |||||| || || | || || ||| | || || ||| || || || | Sbjct 249900 AAACTTGAACTTCTTTCATGAATCTTCCAGCAAGATTCTCTAAAACGATGCCGTCGGATG 249841 Query 37591 CTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAATTTTTTCC 37650 | || || || |||||||| | || ||| |||| ||| | | | ||| || |||| Sbjct 249840 CGGCGAAAAATGCAAGAACGTGGGATACAAAGTGTCGTTCGCCGTCAGTTAAATTGTTCC 249781 Query 37651 AATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAA 37696 ||| | || ||||| ||||||||||||||| || ||||||| || Sbjct 249780 AATGTTGAAGATCTTGTGATAAATCAACTTCTTCGGCGGTCCAGAA 249735 Score = 176 bits (194), Expect = 5e-39 Identities = 356/526 (68%), Gaps = 7/526 (1%) Strand=Plus/Minus Query 37173 AAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTT 37232 ||||| |||||||||||||| | ||||| || | || | || || ||||| ||| Sbjct 258938 AAACAAGCAAAATCACAATGAAGTCCTTCGTCACGCGAAATAAGCTCGTTTGAAAAAGTT 258879 Query 37233 AATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAG 37292 || || ||||||||||| | |||||||| |||||| ||||| ||| ||||| || Sbjct 258878 AAACCAGGCATTAAACCACGTTTTTTAAGCCAAAAAATTGCACAGAAACTACCAGAGAAA 258819 Query 37293 AAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAG--TTGAACTATAAT 37350 |||||||||||||| ||||| || || | | | | | || | | || | || Sbjct 258818 AAAATACCTTCAACGCAAGCAAAAGCAACGATTCTTTCAGCAAACGAATCCGACGA--AT 258761 Query 37351 CAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTG 37410 | |||||||| | |||||| || || || ||| ||| || ||||| | Sbjct 258760 CG---ATCCATTTCAAAGCCCAATCCGCTTTCTTACGAATACAAGGAATCGTCTCAATAG 258704 Query 37411 CTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTAT 37470 | | || | | || || || | ||| ||||||| || |||| || | ||||| Sbjct 258703 CATGAAACAAACGATTCTTCTCAACCGAATCGCTTATATACGTTTCAAGAAGGAGACTAT 258644 Query 37471 ACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAG 37530 |||||||||| || ||||| ||||| || || |||||||| |||||| | || || | Sbjct 258643 ACATTTCAGAATGTATATTCTCAATCGCGATTTGAAAACCGTAAAAAGCACGCGCCTCTG 258584 Query 37531 ATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAG 37590 | | |||||| || || | || || ||| | || || ||| || || || | Sbjct 258583 AAACTTGAACTTCTTTCATGAATCTTCCAGCAAGATTCTCTAAAACGATGCCGTCGGATG 258524 Query 37591 CTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAATTTTTTCC 37650 | || || || |||||||| | || ||| |||| ||| | | | ||| || |||| Sbjct 258523 CGGCGAAAAATGCAAGAACGTGGGATACAAAGTGTCGTTCGCCGTCAGTTAAATTGTTCC 258464 Query 37651 AATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAA 37696 ||| | || ||||| ||||||||||||||| || ||||||| || Sbjct 258463 AATGTTGAAGATCTTGTGATAAATCAACTTCTTCGGCGGTCCAGAA 258418 >seq104 Length=244920 Score = 109 bits (120), Expect = 7e-19 Identities = 251/376 (67%), Gaps = 8/376 (2%) Strand=Plus/Plus Query 37173 AAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTT 37232 ||||| || ||||||||||| | ||||| || | || | || || ||||| ||| Sbjct 172064 AAACAAGCGAAATCACAATGAAGTCCTTCGTCACACAAAATAAGCTCGTTTGAAAAAGTT 172123 Query 37233 AATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAG 37292 || || |||||||||| | |||||||| ||||||||| || ||| | ||| || Sbjct 172124 AAACCATGCATTAAACCACGTTTTTTAAGCCAAAATATCGCACATAAACTACTAGAGAAA 172183 Query 37293 AAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGA--AAGTTGAACTATAAT 37350 |||||||||||||| ||||| || || | | | | | | || | || ||| Sbjct 172184 AAAATACCTTCAACGCAAGCAAAAGCAACGATTCTTTCAACAATCAAATCGA---CGAAT 172240 Query 37351 CAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTG 37410 | |||||||| | |||||| || || || ||| ||| || ||||| | Sbjct 172241 C---GATCCATTTCAAAGCCCAATCCGCTTTCTTACGAATACAAGGAATCGTCTCAATAG 172297 Query 37411 CTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTAT 37470 | | || | | | || || || | ||| ||||||| || |||| || | ||||| Sbjct 172298 CATGAAACAAACAATTCTTCTCAACCAAATCGCTTATATATGTTTCAAGAAGGAGACTAT 172357 Query 37471 ACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAG 37530 |||||||||| || ||||| ||||| || || || || | || ||| | ||||| | Sbjct 172358 ACATTTCAGAATGTATATTCTCAATCGCGATTTGGAACCTGTAGAAAGCACGCGCTTCTG 172417 Query 37531 ATAATTGAACATCGTT 37546 | | |||||| || || Sbjct 172418 AAACTTGAACTTCTTT 172433 >seq7 Length=48961560 Score = 82.4 bits (90), Expect = 9e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 37176 CATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAAT 37235 || ||||||||||| || | ||||||||||||| || | ||||| || || || || Sbjct 5781756 CAAGCAAAATCACAGTGAAGACCTTCATCTCTAGAGATGAGCTCATTTGAGAATGTCAAA 5781697 Query 37236 CCTGGCATTAAACCTCtttttttAATCCAAAATATTGC 37273 |||||||| || ||||| ||||||| ||| ||||| || Sbjct 5781696 CCTGGCATCAATCCTCTCTTTTTAAGCCAGAATATGGC 5781659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592264031977080