Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq6 102 7e-17 >seq6 Length=59463898 Score = 102 bits (112), Expect = 7e-17 Identities = 147/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||||||||| || ||| | || || || || |||||| ||| |||| || Sbjct 20998431 ATGCAAATATTTGTGAAGACACTTACTGGGAAGACTATTACCTTAGAAGTGGAAAGCTCT 20998490 Query 28614 GAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || | || ||||| | || || || ||||| | ||| |||||| Sbjct 20998491 GACACAATTGATAATGTGAAAGCAAAGATTCAG-GATAAGGAGGGTATTCCCCCAGATCA 20998549 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 || || ||||| ||||| ||||| || ||||| ||| | ||| |||| ||||| || Sbjct 20998550 GCAAAGGCTTATTTTTGCTGGCAAGCAGTTGGAGGATGGTCGTACTTTGGCAGATTACAA 20998609 Query 28733 CATTCAAAAAGAATCTACTCTGCAC 28757 ||||| ||||||||||| |||||| Sbjct 20998610 TATTCAGAAAGAATCTACCCTGCAC 20998634 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| ||||| || || || || || || |||||||| ||| || ||| | || Sbjct 20997291 ATGCAGATATTCGTTAAGACCTTGACCGGAAAAACCATCACCCTTGAGGTTGAATCGTCT 20997350 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || ||| | | || ||||| || ||| ||||||||||| | || ||||| Sbjct 20997351 GATACGATTGATAATGTCAAGGCCAAGATCCAGGACAAAGAGGGTATCCCTCCTGATCAG 20997410 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||||| ||||||||||| || |||||| | || ||| || ||| | || ||||| ||| Sbjct 20997411 CAGAGGCTTATCTTTGCAGGGAAACAACTTGAGGATGGTAGAACCCTAGCTGATTACAAC 20997470 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 || || ||||| ||||| || || |||| | |||| |||| || || Sbjct 20997471 ATCCAGAAAGAGTCTACCCTTCATTTGGTGCTTCGATTGAGAGGTGGCAT 20997520 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| || || || || || || ||||||||| ||| ||| |||| Sbjct 20997519 ATGCAAATTTTTGTTAAGACTTTGACAGGGAAGACCATTACCCTCGAGGTTGAATCTTCT 20997578 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || ||| | | || |||| || ||| ||||||||||| | || ||||| Sbjct 20997579 GATACGATTGATAATGTCAAAGCCAAGATCCAGGACAAAGAGGGTATCCCTCCTGATCAG 20997638 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||||| |||||||| || || || |||||||||||| | || | || ||||| || Sbjct 20997639 CAGAGGCTTATCTTCGCCGGTAAGCAATTGGAAGATGGTCGCACCCTAGCTGATTACAAT 20997698 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATT 28771 || ||||| ||||| || || || ||||| | |||| Sbjct 20997699 ATCCAAAAGGAATCCACCCTTCATTTGGTACTTCGATT 20997736 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||| || || || || || || |||||||| || ||| |||| Sbjct 17146799 ATGCAGATCTTTGTGAAGACTTTGACAGGAAAGACCATTACTTTGGAGGTAGAAAGTTCA 17146858 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || |||| |||||| ||||| || ||| | || |||||| Sbjct 17146859 GACACAATCGATAATGTCAAAGCAAAAATACAGGACAAGGAAGGAATCCCACCAGATCAG 17146918 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||||| | |||||||| || || |||||||| ||| | || | || || |||||| Sbjct 17146919 CAGAGGTTGATCTTTGCTGGGAAGCAATTGGAGGATGGAAGGACCCTTGCTGACTATAAC 17146978 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATT 28765 ||||| || || |||||||| ||| | ||||| Sbjct 17146979 ATTCAGAAGGAGTCTACTCTCCACCTTGTATT 17147010 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| || || || || | || || || ||||| ||| ||| || ||| Sbjct 17161673 ATGCAAATCTTCGTCAAGACCCTCACAGGAAAGACCATCACCCTTGAAGTTGAGAGTTCT 17161732 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | || ||||| || ||| ||||||||||| | || ||||| Sbjct 17161733 GACACCATTGACAATGTCAAGGCCAAGATCCAAGACAAAGAGGGTATCCCACCTGATCAG 17161792 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||||| || |||||||| || ||||| | |||||| | ||| |||| ||||| ||| Sbjct 17161793 CAGAGGCTCATCTTTGCTGGAAAACAGCTTGAAGATGGTCGAACCTTGGCTGATTACAAC 17161852 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATT 28765 || || ||||| || ||||| ||| |||| || Sbjct 17161853 ATCCAGAAAGAGTCAACTCTCCACCTGGTTTT 17161884 Score = 89.7 bits (98), Expect = 4e-13 Identities = 150/216 (69%), Gaps = 1/216 (0%) Strand=Plus/Plus Query 28541 TGATTGTGTAAAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGA 28600 ||||| || | | |||||||| || || |||||||| || || |||||||| ||| || Sbjct 20997051 TGATT-TGGACAGATGCAAATCTTCGTGAAAACATTGACCGGCAAAACCATCACCCTTGA 20997109 Query 28601 AACGGAACCTTCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGT 28660 ||| ||| || || | | | | | || || ||| ||||| || || | Sbjct 20997110 GGTGGAGAGTTCCGATACCATAGACAACGTGAAAGCTAAGATCCAAGACAAGGAAGGGAT 20997169 Query 28661 GCCCGTAGATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTAT 28720 || ||||||||| ||||||||||| || || |||||||| |||||| || | Sbjct 20997170 CCCACCAGATCAACAAAGACTTATCTTCGCCGGTAAACAATTAGAAGATGGCCGTACCCT 20997229 Query 28721 GGCCGATTATAACATTCAAAAAGAATCTACTCTGCA 28756 || ||||| ||||| ||||||||||| || || || Sbjct 20997230 TGCTGATTACAACATCCAAAAAGAATCCACCCTTCA 20997265 Score = 86.0 bits (94), Expect = 5e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 28647 GACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAA 28706 ||||||||||| | || |||||| ||||| || || ||||| ||||| || ||||| Sbjct 20998296 GACAAAGAGGGTATTCCTCCAGATCAGCAGAGGCTAATTTTTGCCGGCAAGCAGTTGGAG 20998355 Query 28707 GATTCTAAAACTATGGCCGATTATAACATTCAAAAAGAATCTACTCTGCACATGGTATTA 28766 ||| ||| |||| |||||||| || || || ||||||||| ||||| |||| || Sbjct 20998356 GATGGACGTACTCTGGCTGATTATAATATCCAGAAGGAATCTACTTTGCACTTGGTTTTG 20998415 Query 28767 AG 28768 || Sbjct 20998416 AG 20998417 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||||||||| || || | || || || ||||| || || ||| || Sbjct 17145887 ATGCAAATATTTGTGAAGACTCTCACCGGAAAGACCATCACTCTTGAGGTGGAGAGCTCT 17145946 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | || | ||| || || ||||||||||| | || ||| ||| Sbjct 17145947 GATACCATCGACAATGTAAAGGCTAAGATTCAGGACAAAGAGGGCATTCCACCAGACCAA 17146006 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||||| || |||||||| |||||||| | |||||| |||| |||| ||||| ||| Sbjct 17146007 CAGAGGCTCATCTTTGCTGGCAAACAGCTTGAAGATGGCCGAACTTTGGCAGATTACAAC 17146066 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGT 28762 ||||| ||||| || || || || |||| Sbjct 17146067 ATTCAGAAAGAGTCCACCCTCCATTTGGT 17146095 Score = 84.2 bits (92), Expect = 2e-11 Identities = 149/215 (69%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 ||||||||| ||||| || || || || || || || ||||| || || ||| Sbjct 20997974 AATGCAAATTTTTGTTAAGACTTTGACAGGAAAGACTATTACTTTGGAGGTAGAGAGTTC 20998033 Query 28613 AGAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATC 28671 ||| || | | || | || || || | || || || ||||| | || ||||| Sbjct 20998034 AGATACTATTGATAATGTGAAAGCCAAGATTCAA-GATAAGGAGGGTATCCCACCAGATC 20998092 Query 28672 AACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATA 28731 | ||||| ||||||||||| || ||||| | |||||| | ||| | |||||||||| Sbjct 20998093 AGCAGAGGCTTATCTTTGCTGGTAAACAGCTTGAAGATGGAAGGACTCTTGCCGATTATA 20998152 Query 28732 ACATTCAAAAAGAATCTACTCTGCACATGGTATTA 28766 |||| ||||| || || || || ||| |||| ||| Sbjct 20998153 ACATCCAAAAGGAGTCCACACTTCACTTGGTTTTA 20998187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425367849206133