Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq5 100 3e-16 seq1 96.9 4e-15 seq6 95.1 1e-14 seq4 91.5 2e-13 seq3 84.2 3e-11 >seq5 Length=48169137 Score = 100 bits (110), Expect = 3e-16 Identities = 144/200 (72%), Gaps = 10/200 (5%) Strand=Plus/Minus Query 175396 TTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGA--AATCG 175453 |||||||| ||||||||||||| ||||| |||||| | ||| | ||||| || || Sbjct 31480645 TTTGTGGAACTGTTTGTTGGTGTTGGTGCTTCTAGGGTTAGGGATTTGTTTGAGAAAGCG 31480586 Query 175454 CCCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAGCAAC 175513 ||||| || |||||||| ||||||||||| |||||||| || || | || Sbjct 31480585 AAGTCGAAAGCG--CCTTGTATTGTTTTCATTGATGAAATTGATGCTGTTGGGAGACAGA 31480528 Query 175514 GCAGCGCTGG---TGGTATGCCAGCAAATGACGAGAGAGAACAAACAATTAATCAACTAC 175570 | | ||||| |||| | ||||||||||| |||||||| |||||||| | Sbjct 31480527 GAGGAGCTGGACTTGGTGGT---GGGAATGACGAGAGGGAACAAACTATTAATCAGTTGT 31480471 Query 175571 TCACCGAGATGGATGGCTTT 175590 | || ||||||||||| ||| Sbjct 31480470 TGACGGAGATGGATGGATTT 31480451 >seq1 Length=48359943 Score = 96.9 bits (106), Expect = 4e-15 Identities = 289/442 (65%), Gaps = 8/442 (2%) Strand=Plus/Plus Query 175191 TGATGTTGAGGGGATTGACGCCGCCAAAGATGAACTTGAAGAGATTGTGGATTTTCTCAA 175250 |||||||| ||| | || | |||||| | || || ||| | ||||| ||||| || Sbjct 19053400 TGATGTTGCTGGGGTGGATGAAGCCAAACAAGATTTTATGGAGGTAGTGGAGTTTCTTAA 19053459 Query 175251 GCAACCCGAGAGATATTTTGGAAGTGGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGG 175310 | || ||||| | || | |||||| || || ||| | ||||||| || Sbjct 19053460 AAAGCCTGAGAGGTTCACTGCTATTGGTGCTCGCATTCCAAAAGGAGTTCTTCTCGTAGG 19053519 Query 175311 TAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCC 175370 | || || || || ||||| | | ||| || || || |||||| || || || Sbjct 19053520 TCCACCGGGGACTGGGAAGACGTTATTAGCCAAGGCTATTGCTGGTGAAGCAGGCGTTCC 19053579 Query 175371 ATTCATC-CAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAA 175429 ||| || || | ||| | | | ||||| ||||||||||||||||| ||||| Sbjct 19053580 ATTTTTCTCAAT-CTCAGGTTCTGAGTTTGTTGAGATGTTTGTTGGTGTTGGTGCTTCTC 19053638 Query 175430 GGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTATTGTCTTCATTGATG 175489 | ||||| ||| | || | | || || ||| || |||||||| || |||||| Sbjct 19053639 GAGTTCGAGATTTATTCAAGAAGGCAAAAGAGAATGCTCCTTGTATTGTTTTTGTTGATG 19053698 Query 175490 AGATTGATGCGGTGGGCAAGCAACGCAGCGCTGG---TGGTATGCCAGCAAATGACGAGA 175546 | || ||||| || || | |||||| || |||| |||| || ||||| || | Sbjct 19053699 AAATCGATGCTGTAGGAAGGCAACGAGGCACTGGAATTGGT---GGAGGGAATGATGAAA 19053755 Query 175547 GAGAACAAACAATTAATCAACTACTCACCGAGATGGATGGCTTTGACAATGAGACTGGCA 175606 | ||||| || | || ||||| | || || |||||||| ||||| | | || || | Sbjct 19053756 GGGAACAGACCCTCAACCAACTTTTGACAGAAATGGATGGATTTGAGGGTAATACCGGAA 19053815 Query 175607 TTGTGGTTATTGCGGCCACTAA 175628 | | || ||||| || || || Sbjct 19053816 TCATTGTCATTGCAGCAACCAA 19053837 >seq6 Length=59463898 Score = 95.1 bits (104), Expect = 1e-14 Identities = 174/254 (69%), Gaps = 6/254 (2%) Strand=Plus/Plus Query 175396 TTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCC 175455 ||||| ||||||||||||||| | ||||| | || || ||| | || ||| ||| Sbjct 13715318 TTTGTTGAGATGTTTGTTGGTATCGGTGCTTCTCGTGTCCGTGATTTATTCAAAAAGGCC 13715377 Query 175456 CGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAGCAACGC 175515 || ||| || || |||||||| ||||||| |||||||| || || | ||| | Sbjct 13715378 AAAGAGAATGCTCCTTGCATTGTCTTTGTTGATGAAATTGATGCTGTTGGAAGACAAAGA 13715437 Query 175516 AGCGCTGG---TGGTATGCCAGCAAATGACGAGAGAGAACAAACAATTAATCAACTACTC 175572 | | || |||| || ||||| |||||||||||||| | |||||||| | Sbjct 13715438 GGGACAGGAATTGGTGG---AGGGAATGATGAGAGAGAACAAACCCTCAATCAACTTTTG 13715494 Query 175573 ACCGAGATGGATGGCTTTGACAATGAGACTGGCATTGTGGTTATTGCGGCCACTAATCGC 175632 || || |||||||| ||||| | | ||||| || | || |||| || ||||| | Sbjct 13715495 ACAGAAATGGATGGATTTGAGGGTAATACTGGTATCATTGTCGTTGCAGCAACTAACAGG 13715554 Query 175633 GTGGATATCCTTGA 175646 | || || ||||| Sbjct 13715555 GCCGACATTCTTGA 13715568 >seq4 Length=49191682 Score = 91.5 bits (100), Expect = 2e-13 Identities = 240/360 (67%), Gaps = 11/360 (3%) Strand=Plus/Minus Query 159115 ATAAACTTTGGAATGAGTTTCTCCGGGTATTGATTTGGACCATAAACATTATTACAGCGA 159174 |||||||| |||| ||||| || || |||||||| ||||||||||||||||| | | | Sbjct 41131252 ATAAACTTAGGAACAAGTTTTTCAGGATATTGATTAGGACCATAAACATTATTTCCTCTA 41131193 Query 159175 ATTATTTTGATATTCATATCAAATGATTCTAT-ATATGAACGGACTATCATTTCGGCCGC 159233 | || | || | | || | || ||||| ||| | || | |||||| || | Sbjct 41131192 GATGTTATTATTGGAAGACCATAAGA-TCTATGATAAGCCATAACCAACATTTCAGCACC 41131134 Query 159234 CGCTTTTGATGCTGAATATGGATTTGTTGGTCTAAGTACCCCTGTGTCTTCGGTGAAAGG 159293 ||||||| |||||||| |||||||||||| |||| ||| || | | | Sbjct 41131133 TGCTTTTGTAGCTGAATAAGGATTTGTTGGTAAAAGTTGAGATGTTTCAATGTTACCAAT 41131074 Query 159294 TTC---ATCTGTTTTTGATTCACCGTATACTTCATCTGTACTAAAATGTATAAA---TTC 159347 || |||| | | |||||| || |||||||| ||||||| ||| || || || Sbjct 41131073 ATCAGTATCTAAATCAGTTTCACCATAAACTTCATCAGTACTAACATGAATGAACCTTTT 41131014 Query 159348 AACATTTGGTATGTGACGCCTACAGACTTCAACGAGTGTATGTGTACCATATGTATTGTC 159407 |||| | ||| | ||| || |||| | || |||||| || ||| | |||| Sbjct 41131013 AACA--CAATTTGT-AGCCCTGCATGCTTCTAGAAGAACATGTGTTCCGTATATGTTGTT 41130957 Query 159408 TAAAGTAAACCCAAGAGGACTTGTAAATGAATTGTCTACATGACTTTGTGCGGCAAAGTG 159467 | || || | | | || |||||||||||| |||||| |||| || ||||| || Sbjct 41130956 ATATGTGAATTCCATTGAGTTTCCAAATGAATTGTCAACATGAGTTTGAGCAGCAAAATG 41130897 Score = 89.7 bits (98), Expect = 6e-13 Identities = 208/313 (66%), Gaps = 8/313 (3%) Strand=Plus/Plus Query 175191 TGATGTTGAGGGGATTGACGCCGCCAAAGATGAACTTGAAGAGATTGTGGATTTTCTCAA 175250 ||||||| | || | || | || || | |||||||||||| ||||| ||| | | | Sbjct 25250072 TGATGTTAAAGGTGTGGATGAGGCTAAGGCTGAACTTGAAGAAATTGTTCATTATTTAAG 25250131 Query 175251 GCAACCCGAGAGATATTTTGGAAGTGGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGG 175310 | | || || | | | | | ||||| ||| | || ||| | | || | || Sbjct 25250132 GAATCCTAAGCGGTTTACTCGGCTTGGTGGGAAGCTTCCTAAAGGTGTTTTGCTTGTTGG 25250191 Query 175311 TAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCC 175370 | ||| ||||| || ||||| | | ||| |||| || || ||||| | ||| || Sbjct 25250192 TCCGCCTGGTACTGGTAAGACGATGTTGGCCAGAGCTATTGCTGGTGAGGCTGGTGTTCC 25250251 Query 175371 ATTCATCCAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAG 175430 ||| | ||| || | |||| ||||||||||||||||| ||||||||||| Sbjct 25250252 TTTCTTTTCGTGTAGTGGAAGTGAATTTGAAGAGATGTTTGTTGGTGTTGGTGCCAAAAG 25250311 Query 175431 GGTTCGCGATCTCTTTGAAATCGCCCGCGAAAA----TCAACCATGTATTGTCTTCATTG 175486 |||| | ||||| ||| || | ||||||| | || ||||| | ||||||| Sbjct 25250312 GGTTAGGGATCTTTTT----TCAGCTGCGAAAAAGAGTTCGCCTTGTATAATTTTCATTG 25250367 Query 175487 ATGAGATTGATGC 175499 ||||||||||||| Sbjct 25250368 ATGAGATTGATGC 25250380 >seq3 Length=39989001 Score = 84.2 bits (92), Expect = 3e-11 Identities = 171/250 (68%), Gaps = 8/250 (3%) Strand=Plus/Minus Query 175402 GAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAA 175461 ||||| ||||||||||| ||||| ||| || | ||| | || | | || ||| Sbjct 3924801 GAGATTTTTGTTGGTGTTGGTGCTTCAAGAGTGAGGGATTTGTTCAATAAGGCTAAAGAA 3924742 Query 175462 AATCAACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAGCAACGCAGCGCT 175521 ||| || ||| | | |||||||||||||||||| || || | |||| | | || Sbjct 3924741 AATTCGCCTTGTTTGATATTCATTGATGAGATTGATAGTGTTGGGAGGCAAAGAGGTGCA 3924682 Query 175522 GGTGGTATG-CCAGCAAATGACGAGAGAGAACAAACAATTAATCAACTACTCACCGAGAT 175580 ||| || | || ||||| |||||||| |||||| ||||||| | | || || || Sbjct 3924681 GGT-ATAGGTGGAGGGAATGATGAGAGAGAGCAAACACTTAATCAGTTGTTAACTGAAAT 3924623 Query 175581 GGATGGCTTTGACAATGA---GACTGGCATTGTGGTTATTGCGGCCACTAATCGCGTGGA 175637 |||||| || |||||| | ||| || | |||||||| || |||||| | || Sbjct 3924622 GGATGGTTT---CAATGATAGTAATGGTGTTATAGTTATTGCTGCTACTAATAGACCTGA 3924566 Query 175638 TATCCTTGAT 175647 || |||||| Sbjct 3924565 AATTCTTGAT 3924556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596516453105760