Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq4 141 2e-28 seq6 140 6e-28 seq5 100 5e-16 seq2 96.9 6e-15 >seq4 Length=49191682 Score = 141 bits (156), Expect = 2e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 193148 AAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATC 193207 ||| || ||||| | |||| |||||| ||||||||| || | | ||||| || Sbjct 19846643 AAGAACAAGATGAAGCGTAGACTCTTTCTGAATATTATAATCTGCAAGTGTTCTCCCGTC 19846702 Query 193208 GTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 193267 ||||| ||||||||||| || || || | ||| ||||| || || ||||||||||| || Sbjct 19846703 TTCTAACTGTTTTCCGGCGAAGATCAACCGCTGCTGATCCGGTGGAATTCCTTCTTTGTC 19846762 Query 193268 TTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGT 193327 ||| ||||||| ||| | || || || ||||| || || |||||||| ||||| || Sbjct 19846763 TTGGATTTTGGCTTTCACGTTGTCGATTGTGTCGGAGGATTCTACTTCTAGCGTTATGGT 19846822 Query 193328 TTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||| || ||||| ||||| || || || ||||| Sbjct 19846823 TTTGCCGGTTAGGGTTTTGACGAAGATCTGCAT 19846855 Score = 84.2 bits (92), Expect = 4e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274 || |||||||| || || || ||||| ||||| || || || ||||| ||||| || || Sbjct 14092941 TGCTTTCCGGCGAAGATCAACCTCTGCTGATCTGGGGGAATACCTTCCTTATCCTGGATC 14093000 Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334 |||| || | || || || || ||| ||| || || || || ||||||||||| Sbjct 14093001 TTGGCCTTAACGTTGTCGATTGTGTCAGAACTCTCCACCTCAAGGGTAATAGTTTTACCA 14093060 Query 193335 GTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || || |||||||| Sbjct 14093061 GTGAGGGTCTTCACGAAGATTTGCAT 14093086 >seq6 Length=59463898 Score = 140 bits (154), Expect = 6e-28 Identities = 173/237 (73%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || ||||||||||||||||| |||| ||| | |||| |||||| || || Sbjct 20997527 AATTTGCATGCCACCTCTCAATCGAAGCACCAAATGAAGGGTAGACTCTTTCTGGATGTT 20997468 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 || || | || |||||| ||| || | |||||| || ||||| || | ||||| || Sbjct 20997467 GTAATCAGCTAGGGTTCTACCATCCTCAAGTTGTTTCCCTGCAAAGATAAGCCTCTGCTG 20997408 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||||||||| || || ||||| || || || |||| || | ||| ||| ||||| || Sbjct 20997407 ATCAGGAGGGATACCCTCTTTGTCCTGGATCTTGGCCTTGACATTATCAATCGTATCAGA 20997348 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || ||||| || || || || ||||| || || | || || || ||||| ||||| Sbjct 20997347 CGATTCAACCTCAAGGGTGATGGTTTTTCCGGTCAAGGTCTTAACGAATATCTGCAT 20997291 Score = 136 bits (150), Expect = 7e-27 Identities = 173/238 (73%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || |||||||||||||||||||||| ||| | || | || || || || Sbjct 20997983 AATTTGCATTCCACCTCTCAATCGAAGTACCAAATGAAGGGTGGATTCCTTCTGTATGTT 20997924 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 || |||| || ||||| ||| || | || || || |||||||| | ||||| || Sbjct 20997923 GTAATCGGCTAGGGTTCTTCCATCCTCAAGCTGCTTCCCTGCAAAAATAAGCCTCTGCTG 20997864 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||||||||| || || || ||||| || || |||| ||| | ||| ||| ||||| || Sbjct 20997863 ATCAGGAGGGATACCCTCCTTATCCTGAATCTTGGCTTTGACATTATCAATTGTATCCGA 20997804 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 || ||||| || || || || || || ||||| | || || ||||| ||||||||| Sbjct 20997803 TGATTCAACCTCCAGGGTGATGGTCTTTCCTGTCAAAGTCTTGACAAAAATTTGCATT 20997746 Score = 131 bits (144), Expect = 3e-25 Identities = 171/237 (72%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || || || |||||||||||||||| ||| | || | || || ||||| Sbjct 20997755 AATTTGCATTCCGCCCCTCAATCGAAGTACCAAATGAAGGGTGGATTCCTTTTGGATATT 20997696 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 || || | || || | | ||| || ||||| || ||||| || || | ||||| || Sbjct 20997695 GTAATCAGCTAGGGTGCGACCATCTTCCAATTGCTTACCGGCGAAGATAAGCCTCTGCTG 20997636 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||||||||| || || ||||| || || || |||| ||| | ||| ||| ||||| || Sbjct 20997635 ATCAGGAGGGATACCCTCTTTGTCCTGGATCTTGGCTTTGACATTATCAATCGTATCAGA 20997576 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||| ||||| || || || || || || ||||| | || || ||||| |||||||| Sbjct 20997575 AGATTCAACCTCGAGGGTAATGGTCTTCCCTGTCAAAGTCTTAACAAAAATTTGCAT 20997519 Score = 113 bits (124), Expect = 8e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||| || ||||||||||| || || || | || | |||||| ||||| || || Sbjct 17146572 ATACCTCCCCTCAATCGAAGAACAAGGTGGAGAGTGGACTCTTTCTGGATATTGTAATCA 17146513 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | || | | ||| || | || ||||| |||||||| ||||| || || || || Sbjct 17146512 GCCAGAGTCCGACCATCTTCAAGCTGCTTTCCAGCAAAAATCAATCTTTGCTGGTCTGGG 17146453 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || || || ||||| ||||| |||| |||| ||| || || || || |||| Sbjct 17146452 GGAATACCCTCCTTATCCTGTATCTTGGCCTTTACATTGTCGATTGTGTCTGAGCTCTCA 17146393 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || | ||| |||||||| ||||| || || || ||||| || ||||| Sbjct 17146392 ACCTCCAAAGTAATAGTTTTGCCTGTGAGGGTCTTAACAAAAATCTGCAT 17146343 Score = 104 bits (114), Expect = 4e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || ||||||||||| ||||| || | ||| | || | ||||| || || || || Sbjct 20997292 ATGCCACCTCTCAACCGAAGCACTAAATGAAGGGTGGATTCTTTTTGGATGTTGTAATCA 20997233 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | || | ||| ||||||||||| ||||| || || | ||| |||||||| || Sbjct 20997232 GCAAGGGTACGGCCATCTTCTAATTGTTTACCGGCGAAGATAAGTCTTTGTTGATCTGGT 20997173 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || ||||| || || | ||| | || || ||||||||| ||| Sbjct 20997172 GGGATCCCTTCCTTGTCTTGGATCTTAGCTTTCACGTTGTCTATGGTATCGGAACTCTCC 20997113 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || ||||| || || | ||||| || || |||||||| Sbjct 20997112 ACCTCAAGGGTGATGGTTTTGCCGGTCAATGTTTTCACGAAGATTTGCAT 20997063 Score = 98.7 bits (108), Expect = 2e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211 |||| ||||| |||| || || |||||||| || | | || | ||| || Sbjct 20998411 ACCAAGTGCAAAGTAGATTCCTTCTGGATATTATAATCAGCCAGAGTACGTCCATCCTCC 20998352 Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271 || || || ||||||||||||| ||||| ||||| ||||| || || ||||| || || Sbjct 20998351 AACTGCTTGCCGGCAAAAATTAGCCTCTGCTGATCTGGAGGAATACCCTCTTTGTCCTGA 20998292 Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331 ||||| | || | ||| || ||||| ||| ||||| || | |||||| || || Sbjct 20998291 ATTTTCGCCTTCACATTATCTATTGTATCAGAACTTTCAACCTCCAAAGTTATTGTCTTT 20998232 Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || ||||| |||||||| Sbjct 20998231 CCGGTAAGGGTCTTGACAAAAATTTGCAT 20998203 Score = 96.9 bits (106), Expect = 6e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || || || |||||||| || || | | |||||| || || || |||||||| || Sbjct 9515709 TCTTCCAACTGCTTTCCGGCGAAGATGAGACGCTGTTGGTCTGGTGGAATTCCTTCCTTG 9515768 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| || || | ||| | ||| || || ||||||||||| || || || || || Sbjct 9515769 TCTTGGATCTTTGCTTTGACATTGTCGATTGTGTCGGAAGACTCCACCTCGAGGGTGATC 9515828 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 || ||||| ||||| ||||| || || || ||||| || Sbjct 9515829 GTCTTACCCGTTAGGGTTTTCACGAAGATCTGCATCTT 9515866 Score = 96.9 bits (106), Expect = 6e-15 Identities = 163/236 (69%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| |||||||| | | ||||| |||| ||| | || | |||||| ||| || Sbjct 17146122 ATTTGCATACCACCACGGAGACGAAGCACCAAATGGAGGGTGGACTCTTTCTGAATGTTG 17146063 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 || || | || |||| ||| || | ||||| || ||||| || | |||||||| Sbjct 17146062 TAATCTGCCAAAGTTCGGCCATCTTCAAGCTGTTTGCCAGCAAAGATGAGCCTCTGTTGG 17146003 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || || || || || ||||| || || || || | |||| ||| || ||||| || Sbjct 17146002 TCTGGTGGAATGCCCTCTTTGTCCTGAATCTTAGCCTTTACATTGTCGATGGTATCAGAG 17145943 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||| || || ||||| || || || || || || || || |||||||||||||| Sbjct 17145942 CTCTCCACCTCAAGAGTGATGGTCTTTCCGGTGAGAGTCTTCACAAATATTTGCAT 17145887 Score = 95.1 bits (104), Expect = 2e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 ||||| || || |||| |||| ||||| |||||| || || | || || | | | Sbjct 20998645 CGAAGAACAAGGTGCAGGGTAGATTCTTTCTGAATATTGTAATCTGCCAAAGTACGACCA 20998586 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || || || || || |||||||| | || || ||||| || || || || || ||| Sbjct 20998585 TCCTCCAACTGCTTGCCAGCAAAAATAAGCCTTTGCTGATCTGGGGGAATACCCTCCTTA 20998526 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 || || || || | ||| | ||| ||| || || || || ||||||| || ||| Sbjct 20998525 TCCTGAATCTTTGCTTTCACATTATCAATTGTGTCAGAGCTTTCCACTTCTAAGGTAATA 20998466 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || || || |||||||||||||| Sbjct 20998465 GTCTTCCCAGTAAGTGTCTTCACAAATATTTGCAT 20998431 Score = 93.3 bits (102), Expect = 8e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274 || || || |||||||| | | ||| || || || || || ||||| || ||||| || Sbjct 17161362 TGCTTGCCTGCAAAAATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGAATC 17161303 Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334 |||| || | ||| || ||||| ||| ||||||||| ||||| || ||||| || Sbjct 17161302 TTGGCCTTAACATTGTCTATGGTATCTGAACTCTCAACTTCGAGAGTGATGGTTTTGCCA 17161243 Query 193335 GTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || |||||||||||||| Sbjct 17161242 GTGAGGGTCTTCACAAATATTTGCAT 17161217 >seq5 Length=48169137 Score = 100 bits (110), Expect = 5e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || ||||||||||||||||| || || |||| || || || ||||| || || || || Sbjct 36920664 TCTTCTAATTGTTTTCCGGCGAAGATCAATCGTTGCTGGTCTGGAGGAATACCCTCCTTG 36920605 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| ||||| | || | || || ||||||||| ||| || ||||| || || Sbjct 36920604 TCTTGAATTTTTGCCTTCACGTTGTCGATTGTATCGGAACTCTCTACCTCTAGGGTAATG 36920545 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| || ||||| ||||| || || || ||||| Sbjct 36920544 GTTTTGCCGGTTAGGGTTTTCACGAAGATCTGCAT 36920510 >seq2 Length=36634854 Score = 96.9 bits (106), Expect = 6e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | |||||||||||| || || | || ||||| || || || || ||||| || Sbjct 8273511 TCTTCGAGTTGTTTTCCGGCGAAGATGAGTCGTTGTTGGTCCGGTGGAATCCCTTCCTTG 8273452 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| ||||||| ||| | || || || || || || ||||| || || || || Sbjct 8273451 TCTTGGATTTTGGCTTTGACGTTGTCGATTGTGTCAGAGGATTCAACCTCGAGGGTGATT 8273392 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 |||||||| ||||| ||||| || || || ||||| || Sbjct 8273391 GTTTTACCCGTTAGGGTTTTCACGAAGATCTGCATCTT 8273354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899574252038640