Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq55 116 5e-20 seq8 87.8 2e-11 >seq55 Length=606834 Score = 116 bits (128), Expect = 5e-20 Identities = 178/250 (71%), Gaps = 4/250 (2%) Strand=Plus/Minus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 || || || ||||| || ||||| || || |||||||| || | | |||||| ||||| Sbjct 249952 GAATGTATATTCTCAATCGCGATTTGAAAACCGTAAAAAGCACGCGCCTCTGAAACTTGA 249893 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 || || |||||||| | || || || ||||| |||||||||||| ||||||||| Sbjct 249892 ACTTCTTTCATGAATCTTCCAGCAAGATTCTCTAAAACGATGCCGTCGGATGCGGCGAAA 249833 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCA--GTGGA 869810 || || || ||||| | |||||| || ||| |||| | | ||| || || Sbjct 249832 AATGCAAGAACGTGGGATACAAAGTGTCGTTCGCCGTCAGTTAAATTGTTCCAATGTTGA 249773 Query 869811 CGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGT 869870 | | | | | | | || || || ||||||||||||| ||||| ||||| ||||||| Sbjct 249772 AGATCT-TGTGAT-AAATCAACTTCTTCGGCGGTCCAGAATGAGGCTTCGGCTTTTTTGT 249715 Query 869871 ACATCTCCCA 869880 |||| ||||| Sbjct 249714 ACATTTCCCA 249705 Score = 116 bits (128), Expect = 5e-20 Identities = 178/250 (71%), Gaps = 4/250 (2%) Strand=Plus/Minus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 || || || ||||| || ||||| || || |||||||| || | | |||||| ||||| Sbjct 258635 GAATGTATATTCTCAATCGCGATTTGAAAACCGTAAAAAGCACGCGCCTCTGAAACTTGA 258576 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 || || |||||||| | || || || ||||| |||||||||||| ||||||||| Sbjct 258575 ACTTCTTTCATGAATCTTCCAGCAAGATTCTCTAAAACGATGCCGTCGGATGCGGCGAAA 258516 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCA--GTGGA 869810 || || || ||||| | |||||| || ||| |||| | | ||| || || Sbjct 258515 AATGCAAGAACGTGGGATACAAAGTGTCGTTCGCCGTCAGTTAAATTGTTCCAATGTTGA 258456 Query 869811 CGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGT 869870 | | | | | | | || || || ||||||||||||| ||||| ||||| ||||||| Sbjct 258455 AGATCT-TGTGAT-AAATCAACTTCTTCGGCGGTCCAGAATGAGGCTTCGGCTTTTTTGT 258398 Query 869871 ACATCTCCCA 869880 |||| ||||| Sbjct 258397 ACATTTCCCA 258388 >seq8 Length=16477302 Score = 87.8 bits (96), Expect = 2e-11 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || || |||||| | |||||||| ||||| || ||| |||| | ||||||| || Sbjct 6039555 GCTGCAAACTACTTAAACATCAAGAACCTGCTGGACCTTACATGCATGACTGTGGCAGAC 6039614 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296 ||||||||||| ||| | || ||||| || ||||||||||| ||||| ||| Sbjct 6039615 ATGATCAAGGGGAAGACACCTGAGGAAATTCGCAAGACCTTCAACATTAAG 6039665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106554325004259