Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq6 113 4e-20 seq5 86.0 5e-12 >seq6 Length=59463898 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| || || ||||| || |||||||||||||| ||| | || |||| | | Sbjct 20997063 ATGCAAATCTTCGTGAAAACATTGACCGGCAAAACCATCACCCTTGAGGTGGAGAGTTCC 20997122 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| | | | | || ||| ||||| ||||| ||||| | || |||||| Sbjct 20997123 GATACCATAGACAACGTGAAAGCTAAGATCCAAGACAAGGAAGGGATCCCACCAGATCAA 20997182 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||||||||||| | || |||||||| | || |||| | | || | || ||||||||| Sbjct 20997183 CAAAGACTTATCTTCGCCGGTAAACAATTAGAAGATGGCCGTACCCTTGCTGATTACAAC 20997242 Query 110453 ATTCAAAAAGAATCTAC 110469 || ||||||||||| || Sbjct 20997243 ATCCAAAAAGAATCCAC 20997259 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||||||||| || ||| | ||||| || ||||| || | || |||| Sbjct 17145887 ATGCAAATATTTGTGAAGACTCTCACCGGAAAGACCATCACTCTTGAGGTGGAGAGCTCT 17145946 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| ||| | | ||||| |||||| |||||||| ||| | || || ||| Sbjct 17145947 GATACCATCGACAATGTAAAGGCTAAGATTCAGGACAAAGAGGGCATTCCACCAGACCAA 17146006 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || || || || | ||| || |||||||| || |||| | |||| |||| ||||||||| Sbjct 17146007 CAGAGGCTCATCTTTGCTGGCAAACAGCTTGAAGATGGCCGAACTTTGGCAGATTACAAC 17146066 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTG 110482 ||||| ||||| || || | || ||||| Sbjct 17146067 ATTCAGAAAGAGTCCACCCTCCATTTGGTG 17146096 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/207 (71%), Gaps = 6/207 (3%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGA--GC-CT 110329 |||||||||||||| || || | || || || || |||||| | ||| ||| || || Sbjct 20998431 ATGCAAATATTTGTGAAGACACTTACTGGGAAGACTATTACCTTAGAAGTGGAAAGCTCT 20998490 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 ||| || | | | || ||| |||||| || || || || | ||| ||| Sbjct 20998491 GAC---ACAATTGATAATGTGAAAGCAAAGATTCAGGATAAGGAGGGTATTCCCCCAGAT 20998547 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 || ||||| ||||||| ||| || || ||| ||||||||| | || |||| |||||| Sbjct 20998548 CAGCAAAGGCTTATTTTTGCTGGCAAGCAGTTGGAGGATGGTCGTACTTTGGCAGATTAC 20998607 Query 110450 AACATTCAAAAAGAATCTACGTTGCAC 110476 || ||||| ||||||||||| ||||| Sbjct 20998608 AATATTCAGAAAGAATCTACCCTGCAC 20998634 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||||||||| || || | || ||||||||||| || ||||| ||| | Sbjct 17161217 ATGCAAATATTTGTGAAGACCCTCACTGGCAAAACCATCACTCTCGAAGTTGAGAGTTCA 17161276 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| | | | | || || |||||| ||||| |||||| | || || || Sbjct 17161277 GATACCATAGACAATGTTAAGGCCAAGATTCAAGACAAGGAAGGCATCCCACCAGACCAG 17161336 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || | || |||| ||| || || ||||||||||||| | || | || ||||||||| Sbjct 17161337 CAGCGTCTCATTTTTGCAGGCAAGCAGCTGGAGGATGGGCGTACCCTTGCTGATTACAAC 17161396 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501 || |||||||| || || | || ||||| | | || || || |||| Sbjct 17161397 ATCCAAAAAGAGTCAACCCTTCATTTGGTGCTCCGTCTCCGTGGTGGAA 17161445 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 ||||||||| ||||| || ||||| || || || || ||||| | || ||| | Sbjct 20997974 AATGCAAATTTTTGTTAAGACTTTGACAGGAAAGACTATTACTTTGGAGGTAGAGAGTTC 20998033 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 |||||| | | | || ||| |||||| || || || || | || ||||| Sbjct 20998034 AGATACTATTGATAATGTGAAAGCCAAGATTCAAGATAAGGAGGGTATCCCACCAGATCA 20998093 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 || || ||||| | ||| ||||||||||| || |||| || || | || ||||| || Sbjct 20998094 GCAGAGGCTTATCTTTGCTGGTAAACAGCTTGAAGATGGAAGGACTCTTGCCGATTATAA 20998153 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||| ||||| || || || | ||| |||| ||| | || || ||||| Sbjct 20998154 CATCCAAAAGGAGTCCACACTTCACTTGGTTTTACGGCTTCGTGGGGG 20998201 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| || || || || | || ||||| ||||| || |||| ||| | Sbjct 17145659 ATGCAAATTTTCGTTAAGACCCTCACTGGCAAGACCATAACTCTCGAGGTTGAGAGTTCA 17145718 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| | | | | || || |||||| ||||| |||||| | || || ||| Sbjct 17145719 GATACCATAGACAATGTTAAGGCCAAGATTCAAGACAAGGAAGGCATCCCACCAGACCAA 17145778 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || || || || | |||||| |||||||| || |||| | |||| |||| ||||||||| Sbjct 17145779 CAGAGGCTCATCTTTGCGGGCAAACAGCTTGAAGATGGCCGAACTTTGGCAGATTACAAC 17145838 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTG 110482 || ||||| || || || | || ||||| Sbjct 17145839 ATCCAAAAGGAGTCCACACTTCATTTGGTG 17145868 >seq5 Length=48169137 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || || || ||||| |||||||||||||||||||| | || ||| | | Sbjct 36920510 ATGCAGATCTTCGTGAAAACCCTAACCGGCAAAACCATTACCCTAGAGGTAGAGAGTTCC 36920569 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| ||| | | || || || ||| ||||| || || | || || || Sbjct 36920570 GATACAATCGACAACGTGAAGGCAAAAATTCAAGACAAGGAGGGTATTCCTCCAGACCAG 36920629 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| || | || | || || ||||| | || || | || ||| ||||||||||||| Sbjct 36920630 CAACGATTGATCTTCGCCGGAAAACAATTAGAAGACGGAAGGACACTGGCGGATTACAAT 36920689 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 || ||||| ||||| ||| | || ||||| | |||| || || || Sbjct 36920690 ATCCAAAAGGAATCAACGCTTCATTTGGTGCTTCGACTTCGCGGCGG 36920736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412805740449611