Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq6 129 9e-25 seq4 87.8 3e-12 >seq6 Length=59463898 Score = 129 bits (142), Expect = 9e-25 Identities = 164/226 (73%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | |||||||| || || ||||| || || |||| || || | || Sbjct 20997064 TGCAAATCTTCGTGAAAACATTGACCGGCAAAACCATCACCCTTGAGGTGGAGAGTTCCG 20997123 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || | || || ||| ||| || ||| || ||||| || ||||| ||||||| Sbjct 20997124 ATACCATAGACAACGTGAAAGCTAAGATCCAAGACAAGGAAGGGATCCCACCAGATCAAC 20997183 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||||| || || || |||||||||||||| ||| | || | | ||||| || | Sbjct 20997184 AAAGACTTATCTTCGCCGGTAAACAATTAGAAGATGGCCGTACCCTTGCTGATTACAACA 20997243 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | ||||||||||| || | |||||||| | || || ||||| || Sbjct 20997244 TCCAAAAAGAATCCACCCTTCATTTAGTGCTTCGGTTGAGAGGTGG 20997289 Score = 100 bits (110), Expect = 4e-16 Identities = 147/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | || || | || ||||| || || || |||| || ||| | Sbjct 17161446 TGCAAATCTTCGTGAAGACTCTCACTGGAAAGACGATCACCCTTGAGGTGGAAAGCTCTG 17161505 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| | ||||| || || || || || || |||||||||| || |||| Sbjct 17161506 ATACTATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGAGCATTCCACCAGACCAAC 17161565 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || ||||||||||| || ||||| | || ||| |||| ||| ||||||| |||| Sbjct 17161566 AGAGGCTCATTTTTGCTGGCAAACAGCTTGAGGATGGCCGAACTTTAGCAGATTACAATA 17161625 Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239 | || |||||||| || | ||||| || Sbjct 17161626 TTCAGAAAGAATCCACCCTTCATTTGGT 17161653 Score = 100 bits (110), Expect = 4e-16 Identities = 160/227 (70%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 ||||||| || | || || || |||||||| || || || | || || ||| ||| Sbjct 20997748 TGCAAATTTTTGTCAAGACTTTGACAGGAAAGACCATCACCCTGGAGGTTGAATCATCG- 20997806 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 ||||| ||| | ||||| ||| || || || ||| || || || || || ||||| Sbjct 20997807 GATACAATTGATAATGTCAAAGCCAAGATTCAGGATAAGGAGGGTATCCCTCCTGATCAG 20997866 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 || || || ||||||||||| || || | || ||| ||||| || | ||||| || Sbjct 20997867 CAGAGGCTTATTTTTGCAGGGAAGCAGCTTGAGGATGGAAGAACCCTAGCCGATTACAAC 20997926 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 ||||| || ||||| || | ||||| ||| | ||||| ||||| || Sbjct 20997927 ATACAGAAGGAATCCACCCTTCATTTGGTACTTCGATTGAGAGGTGG 20997973 Score = 96.9 bits (106), Expect = 5e-15 Identities = 146/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| | || || | || ||||| || || ||| |||| || || | Sbjct 17145888 TGCAAATATTTGTGAAGACTCTCACCGGAAAGACCATCACTCTTGAGGTGGAGAGCTCTG 17145947 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || | |||||||| ||| || || ||||| ||||||||||| || |||| Sbjct 17145948 ATACCATCGACAATGTAAAGGCTAAGATTCAGGACAAAGAGGGCATTCCACCAGACCAAC 17146007 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || ||||| ||||| || ||||| | || ||| |||| || ||||||| || | Sbjct 17146008 AGAGGCTCATCTTTGCTGGCAAACAGCTTGAAGATGGCCGAACTTTGGCAGATTACAACA 17146067 Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239 | || ||||| || || ||||||| || Sbjct 17146068 TTCAGAAAGAGTCCACCCTCCATTTGGT 17146095 Score = 84.2 bits (92), Expect = 3e-11 Identities = 147/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || | |||||||| || || || |||| ||||| | | Sbjct 17146116 TGCAAATCTTTGTCAAGACCCTCACAGGAAAGACCATCACACTTGAGGTAGAGAGTTCTG 17146175 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || | ||||| || || |||||| ||||| ||||||||||| || || | Sbjct 17146176 ACACCATAGACAATGTCAAGGCAAAGATACAAGACAAAGAGGGCATTCCACCAGACCAGC 17146235 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 |||| | |||||||| || || || | || ||| |||| || | ||||| || | Sbjct 17146236 AAAGGTTGATTTTTGCTGGAAAGCAGCTTGAAGATGGACGAACCTTGGCCGATTACAACA 17146295 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | ||||| || || ||| ||||| | || || || Sbjct 17146296 TTCAAAAGGAGTCAACTCTCCATCTTGTTTTGCG 17146329 >seq4 Length=49191682 Score = 87.8 bits (96), Expect = 3e-12 Identities = 137/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | || || |||| || || || |||||| | || || || | | Sbjct 19846626 TGCAGATTTTTGTGAAGACGCTAACGGGGAAGACGATTACTTTGGAGGTGGAGAGTTCTG 19846567 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| | ||||| ||| || || ||| ||| || || |||||||| ||||||| Sbjct 19846566 ATACGATTGATAATGTGAAAGCGAAGATTCAAGATAAGGAGGGAATTCCACCGGATCAAC 19846507 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | || |||||||| ||||||||| | || ||| | || | | |||||||||| Sbjct 19846506 AGCGTCTTATTTTTGCTGGTAAACAACTTGAAGATGGACGCACTCTTGCTGATTATAATA 19846447 Query 146212 TACAAAAAGAATCGAC 146227 | || || ||||| || Sbjct 19846446 TTCAGAAGGAATCTAC 19846431 Score = 87.8 bits (96), Expect = 3e-12 Identities = 137/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | ||||| |||| || ||||| || || | || |||||| || Sbjct 19846854 TGCAGATCTTCGTCAAAACCCTAACCGGCAAAACCATAACGCTAGAAGTAGAATCCTCCG 19846795 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || | || || ||| ||||| ||| |||||||| |||||||| ||||| | Sbjct 19846794 ACACAATCGACAACGTGAAAGCCAAAATCCAAGACAAAGAAGGAATTCCACCGGATCAGC 19846735 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | | || || || || ||||| ||||| || ||||| | |||||||||||| Sbjct 19846734 AGCGGTTGATCTTCGCCGGAAAACAGTTAGAAGACGGGAGAACACTTGCAGATTATAATA 19846675 Query 146212 TACAAAAAGAATCGAC 146227 | || ||||| || || Sbjct 19846674 TTCAGAAAGAGTCTAC 19846659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786096362400840