Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq4 100 3e-16 seq6 95.1 1e-14 >seq4 Length=49191682 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 137202 AACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTC 137261 ||| | ||||| ||||| ||||| || || || ||||| | ||| ||| |||||| Sbjct 19846646 AACAAGATGAAGCGTAGACTCTTTCTGAATATTATAATCTGCAAGTGTTCTCCCGTCTTC 19846705 Query 137262 GAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 137321 | ||||| || || |||||| || |||||||| || || || ||||||||||| Sbjct 19846706 TAACTGTTTTCCGGCGAAGATCAACCGCTGCTGATCCGGTGGAATTCCTTCTTTGTCTTG 19846765 Query 137322 AATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTT 137381 ||||| ||| | | || | ||||| | || ||||||||| | || | || || Sbjct 19846766 GATTTTGGCTTTCACGTTGTCGATTGTGTCGGAGGATTCTACTTCTAGCGTTATGGTTTT 19846825 Query 137382 GCCGGTCAATGTTTTTACGAATATTTGCAT 137411 |||||| | ||||| ||||| || ||||| Sbjct 19846826 GCCGGTTAGGGTTTTGACGAAGATCTGCAT 19846855 >seq6 Length=59463898 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 137184 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATC-GC 137242 ||| |||| || || | || ||||||| ||||| ||||| || ||||||||||| || Sbjct 20997518 GCCACCTCTCAATCGAAGCACCAAATGAAGGGTAGACTCTTTCTGGATGTTGTAATCAGC 20997459 Query 137243 TCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 137302 | | || || || || |||||||| || ||| |||| || | |||||||| |||| Sbjct 20997458 T-AGGGTTCTACCATCCTCAAGTTGTTTCCCTGCAAAGATAAGCCTCTGCTGATCAGGAG 20997400 Query 137303 GTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTA 137362 | || || |||||||| || || || | | || | ||| || | | ||| | Sbjct 20997399 GGATACCCTCTTTGTCCTGGATCTTGGCCTTGACATTATCAATCGTATCAGACGATTCAA 20997340 Query 137363 CTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 | |||| || | || || |||||||| || || |||||||| ||||| Sbjct 20997339 CCTCAAGGGTGATGGTTTTTCCGGTCAAGGTCTTAACGAATATCTGCAT 20997291 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 137197 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 137256 || ||||| || |||| ||| || || ||||| ||||| |||||| | || || Sbjct 20998189 CGTAAAACCAAGTGAAGTGTGGACTCCTTTTGGATGTTATAATCGGCAAGAGTCCTTCCA 20998130 Query 137257 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 137316 ||||| || |||||||||||| |||| || | |||||||| || || || || || || Sbjct 20998129 TCTTCAAGCTGTTTACCAGCAAAGATAAGCCTCTGCTGATCTGGTGGGATACCCTCCTTA 20998070 Query 137317 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACC 137376 || ||| || ||| | | || | || |||| ||||| || | ||| | Sbjct 20998069 TCTTGAATCTTGGCTTTCACATTATCAATAGTATCTGAACTCTCTACCTCCAAAGTAATA 20998010 Query 137377 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 ||||| || ||||| || || || || |||||||| Sbjct 20998009 GTCTTTCCTGTCAAAGTCTTAACAAAAATTTGCAT 20997975 Score = 82.4 bits (90), Expect = 7e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || || | ||||||||| | ||| | || || || ||||| |||||||||||| | Sbjct 17146341 CCACCACGGAGACGCAAAACAAGATGGAGAGTTGACTCCTTTTGAATGTTGTAATCGGCC 17146282 Query 137245 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 137303 | || | || | ||||| || || || |||||| | |||| | |||||| || || || Sbjct 17146281 AAGGTTCGTCCA-TCTTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGTGG 17146223 Query 137304 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTAC 137363 ||||| |||||||| || ||| || | | || | ||||| | ||||| Sbjct 17146222 AATGCCCTCTTTGTCTTGTATCTTTGCCTTGACATTGTCTATGGTGTCAGAACTCTCTAC 17146163 Query 137364 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 |||| || | ||||| || || | || || || || ||||||||| Sbjct 17146162 CTCAAGTGTGATGGTCTTTCCTGTGAGGGTCTTGACAAAGATTTGCATA 17146114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488500476836400