Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq55 174 4e-38 seq104 91.5 3e-13 >seq55 Length=606834 Score = 174 bits (192), Expect = 4e-38 Identities = 534/821 (65%), Gaps = 15/821 (2%) Strand=Plus/Plus Query 131462 GATATGTATAAGAAATCTGTTGCGGCCTTCTGGACTGTTGAAGAGATCGATATGACCAAA 131521 || ||||| || ||| | | || | |||||||| | ||||| | ||| | | || Sbjct 249708 GAAATGTACAAAAAAGCCGAAGCCTCATTCTGGACCGCCGAAGAAGTTGATTTATCACAA 249767 Query 131522 GATATTGATGATTGGGAAAAATTAACCTTGAATGAAAAAGAT--TTTGTTTCCAAAGTTC 131579 ||| || | ||||| | || ||||| ||| | || || ||||| ||| | |||| Sbjct 249768 GATCTTCAACATTGGAACAATTTAAC--TGACGGCGAACGACACTTTGTATCCCACGTTC 249825 Query 131580 TTGCATTCTTCGCCGGAAGTGATGGCATTGTTATTGAAAATCTTGTTATTAATTTCATTC 131639 ||||||| ||||||| | || ||||| ||| | || ||||||| | | ||||| Sbjct 249826 TTGCATTTTTCGCCGCATCCGACGGCATCGTTTTAGAGAATCTTGCTGGAAGATTCATGA 249885 Query 131640 AAGAAATTGATATTCCTGAAGTAACATCGTTCTACACATTTCAAGCCGCTGTTGAATCTA 131699 ||||| || | || | || | | || ||| |||||| ||| |||| || Sbjct 249886 AAGAAGTTCAAGTTTCAGAGGCGCGTGCTTTTTACGGTTTTCAAATCGCGATTGAGAATA 249945 Query 131700 TTCATAGCGAGATGTAT----TCATTATTGATTGAGAGTCTTGTTAAAAATGAAGATGAT 131755 | ||| || |||||| || || |||| | || | | | || | ||| Sbjct 249946 TACATTCTGAAATGTATAGTCTCCTTCTTGA---AACGTATA-TAAGCGATTCGGTTGAG 250001 Query 131756 AAAAATAAATTATTTGATGCTGTAAATAAATTTCCTGCAATTAAAAAGAAAGCAGAATGG 131815 || ||| || ||| ||||| | | | ||||| ||| |||||||| || ||| Sbjct 250002 AAGAATCGTTTGTTTCATGCTATTGAGACGATTCCTTGTATTCGTAAGAAAGCGGATTGG 250061 Query 131816 GCTATTAAATGGATTCAAGATGATTCCGCTAATTTTTCTACAAGACTTGTAGCTTTTGCT 131875 ||| | |||||||| ||| || | | ||| || |||| | || ||||||||| Sbjct 250062 GCTTTGAAATGGATC---GATTCGTCGGATTCGTTTGCTGAAAGAATCGTTGCTTTTGCT 250118 Query 131876 TGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTTTGGCTTAAGAAGCGT 131935 || ||||||||||| || || || ||| ||||||||| || ||||||||||| || ||| Sbjct 250119 TGCGTTGAAGGTATTTTTTTCTCTGGTAGTTTCTGTGCAATTTTTTGGCTTAAAAAACGT 250178 Query 131936 GGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGATGAAGCATTGCAT 131995 || || |||||||| | | || || || | | || ||| | || |||| | | ||| Sbjct 250179 GGTTTAATGCCTGGTTTAACTTTTTCAAACGAGCTTATTTCGCGTGACGAAGGACTTCAT 250238 Query 131996 ACTGAATTTGCTATATTAATCTATAGAAAATTTGCTGATAAACTTGATGAAAATAATATT 132055 ||| |||||| || | ||| | ||| ||||||| ||| | | Sbjct 250239 TGTGATTTTGCTTGTTTGCTTTATTCACTATTGAGGAATAAACTGAGTGAGGAGCGAGTG 250298 Query 132056 AAACAACTTATAAGCGAAGCAGTTGATATCGAGAAGGAGTTTATTACAGAAGCTTTGCCT 132115 || | || | || || || ||||| || |||| ||||||| || || || | || Sbjct 250299 AAGAAGATTGTGAGTGATGCGGTTGAGATTGAGAGGGAGTTTGTTTGTGACGCGCTTCCG 250358 Query 132116 TGCAATTTGATTGGGATGAATGCTGACTCTATGAAGGAGTACATTGAATTCGTTGCTGAT 132175 ||| ||| | |||||||||| ||| | |||| |||| ||||| |||||||| ||| Sbjct 250359 TGCGCGTTGGTCGGGATGAATGGTGATTTGATGAGCCAGTATATTGAGTTCGTTGCCGAT 250418 Query 132176 CGTTTAATTAACCAACTTGGATATTCCAAGATTTATAACACCCAAAACCCCTATACATGG 132235 | || | | ||||| | | || ||||||| || || || | | ||| Sbjct 250419 AGGTTGTTGGGTGAGCTTGGTTGTGGGAAAGTTTATAATGTTCAGAATCCTTTTGATTGG 250478 Query 132236 ATGGAGTCAATTTCGCTTGAAGGTAAAACGAACTTCTTCGA 132276 ||||||| ||||| ||| |||| || || ||||| || || Sbjct 250479 ATGGAGTTGATTTCTCTTCAAGGGAAGACTAACTTTTTTGA 250519 Score = 174 bits (192), Expect = 4e-38 Identities = 534/821 (65%), Gaps = 15/821 (2%) Strand=Plus/Plus Query 131462 GATATGTATAAGAAATCTGTTGCGGCCTTCTGGACTGTTGAAGAGATCGATATGACCAAA 131521 || ||||| || ||| | | || | |||||||| | ||||| | ||| | | || Sbjct 258391 GAAATGTACAAAAAAGCCGAAGCCTCATTCTGGACCGCCGAAGAAGTTGATTTATCACAA 258450 Query 131522 GATATTGATGATTGGGAAAAATTAACCTTGAATGAAAAAGAT--TTTGTTTCCAAAGTTC 131579 ||| || | ||||| | || ||||| ||| | || || ||||| ||| | |||| Sbjct 258451 GATCTTCAACATTGGAACAATTTAAC--TGACGGCGAACGACACTTTGTATCCCACGTTC 258508 Query 131580 TTGCATTCTTCGCCGGAAGTGATGGCATTGTTATTGAAAATCTTGTTATTAATTTCATTC 131639 ||||||| ||||||| | || ||||| ||| | || ||||||| | | ||||| Sbjct 258509 TTGCATTTTTCGCCGCATCCGACGGCATCGTTTTAGAGAATCTTGCTGGAAGATTCATGA 258568 Query 131640 AAGAAATTGATATTCCTGAAGTAACATCGTTCTACACATTTCAAGCCGCTGTTGAATCTA 131699 ||||| || | || | || | | || ||| |||||| ||| |||| || Sbjct 258569 AAGAAGTTCAAGTTTCAGAGGCGCGTGCTTTTTACGGTTTTCAAATCGCGATTGAGAATA 258628 Query 131700 TTCATAGCGAGATGTAT----TCATTATTGATTGAGAGTCTTGTTAAAAATGAAGATGAT 131755 | ||| || |||||| || || |||| | || | | | || | ||| Sbjct 258629 TACATTCTGAAATGTATAGTCTCCTTCTTGA---AACGTATA-TAAGCGATTCGGTTGAG 258684 Query 131756 AAAAATAAATTATTTGATGCTGTAAATAAATTTCCTGCAATTAAAAAGAAAGCAGAATGG 131815 || ||| || ||| ||||| | | | ||||| ||| |||||||| || ||| Sbjct 258685 AAGAATCGTTTGTTTCATGCTATTGAGACGATTCCTTGTATTCGTAAGAAAGCGGATTGG 258744 Query 131816 GCTATTAAATGGATTCAAGATGATTCCGCTAATTTTTCTACAAGACTTGTAGCTTTTGCT 131875 ||| | |||||||| ||| || | | ||| || |||| | || ||||||||| Sbjct 258745 GCTTTGAAATGGATC---GATTCGTCGGATTCGTTTGCTGAAAGAATCGTTGCTTTTGCT 258801 Query 131876 TGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTTTGGCTTAAGAAGCGT 131935 || ||||||||||| || || || ||| ||||||||| || ||||||||||| || ||| Sbjct 258802 TGCGTTGAAGGTATTTTTTTCTCTGGTAGTTTCTGTGCAATTTTTTGGCTTAAAAAACGT 258861 Query 131936 GGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGATGAAGCATTGCAT 131995 || || |||||||| | | || || || | | || ||| | || |||| | | ||| Sbjct 258862 GGTTTAATGCCTGGTTTAACTTTTTCAAACGAGCTTATTTCGCGTGACGAAGGACTTCAT 258921 Query 131996 ACTGAATTTGCTATATTAATCTATAGAAAATTTGCTGATAAACTTGATGAAAATAATATT 132055 ||| |||||| || | ||| | ||| ||||||| ||| | | Sbjct 258922 TGTGATTTTGCTTGTTTGCTTTATTCACTATTGAGGAATAAACTGAGTGAGGAGCGAGTG 258981 Query 132056 AAACAACTTATAAGCGAAGCAGTTGATATCGAGAAGGAGTTTATTACAGAAGCTTTGCCT 132115 || | || | || || || ||||| || |||| ||||||| || || || | || Sbjct 258982 AAGAAGATTGTGAGTGATGCGGTTGAGATTGAGAGGGAGTTTGTTTGTGACGCGCTTCCG 259041 Query 132116 TGCAATTTGATTGGGATGAATGCTGACTCTATGAAGGAGTACATTGAATTCGTTGCTGAT 132175 ||| ||| | |||||||||| ||| | |||| |||| ||||| |||||||| ||| Sbjct 259042 TGCGCGTTGGTCGGGATGAATGGTGATTTGATGAGCCAGTATATTGAGTTCGTTGCCGAT 259101 Query 132176 CGTTTAATTAACCAACTTGGATATTCCAAGATTTATAACACCCAAAACCCCTATACATGG 132235 | || | | ||||| | | || ||||||| || || || | | ||| Sbjct 259102 AGGTTGTTGGGTGAGCTTGGTTGTGGGAAAGTTTATAATGTTCAGAATCCTTTTGATTGG 259161 Query 132236 ATGGAGTCAATTTCGCTTGAAGGTAAAACGAACTTCTTCGA 132276 ||||||| ||||| ||| |||| || || ||||| || || Sbjct 259162 ATGGAGTTGATTTCTCTTCAAGGGAAGACTAACTTTTTTGA 259202 >seq104 Length=244920 Score = 91.5 bits (100), Expect = 3e-13 Identities = 111/151 (74%), Gaps = 8/151 (5%) Strand=Plus/Minus Query 131801 AAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCTAATT--TTTCTACAA 131858 |||||||| || |||||| | |||||||| ||||| | | || || | || Sbjct 172271 AAGAAAGCGGATTGGGCTTTGAAATGGATC------GATTCGTCGATTTGATTGTTGAAA 172218 Query 131859 GACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCT 131918 || | || ||||||||||| ||||||||||| || || || || ||| ||||| || | Sbjct 172217 GAATCGTTGCTTTTGCTTGCGTTGAAGGTATTTTTTTCTCTAGTAGTTTATGTGCGATAT 172158 Query 131919 TTTGGCTTAAGAAGCGTGGATTGATGCCTGG 131949 |||||||||| || ||||| || |||| ||| Sbjct 172157 TTTGGCTTAAAAAACGTGGTTTAATGCATGG 172127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186704426560047