Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq6 107 2e-18 seq5 89.7 5e-13 seq2 84.2 2e-11 >seq6 Length=59463898 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || |||||||| ||||| ||| | ||||| | || || || | Sbjct 20997063 ATGCAAATCTTCGTGAAAACATTGACCGGCAAAACCATCACCCTTGAGGTGGAGAGTTCC 20997122 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 ||||| || || | || ||| || || || || || || || || || ||||| Sbjct 20997123 GATACCATAGACAACGTGAAAGCTAAGATCCAAGACAAGGAAGGGATCCCACCAGATCAA 20997182 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 |||||||| || | || ||| |||||| | ||||||| | | | |||||||| Sbjct 20997183 CAAAGACTTATCTTCGCCGGTAAACAATTAGAAGATGGCCGTACCCTTGCTGATTACAAC 20997242 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 || ||||||||||||||| ||||||||||| | | |||||||| || Sbjct 20997243 ATCCAAAAAGAATCCACCCTTCATTTAGTGCTTCGGTTGAGAGGTGG 20997289 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233 ||||||| | ||||| || || || || || || | || || |||| || ||| | Sbjct 20997518 CATGCAAATTTTTGTTAAGACTTTGACAGGGAAGACCATTACCCTCGAGGTTGAATCTTC 20997577 Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 ||||| || || | || ||| || || || ||||||||||| || || ||||| Sbjct 20997578 TGATACGATTGATAATGTCAAAGCCAAGATCCAGGACAAAGAGGGTATCCCTCCTGATCA 20997637 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGC-GATTACA 25352 ||| || || || | || ||| || ||| | ||||||| | | | | ||| ||||||| Sbjct 20997638 GCAGAGGCTTATCTTCGCCGGTAAGCAATTGGAAGATGGTCGCACCCT-AGCTGATTACA 20997696 Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAA 25403 |||| ||||| ||||||||| ||||||| || | ||||||| || |||| Sbjct 20997697 ATATCCAAAAGGAATCCACCCTTCATTTGGTACTTCGATTGAGGGGCGGAA 20997747 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233 |||||| | || || || || || ||||||||| | ||||| | || || ||| | Sbjct 20997290 CATGCAGATATTCGTTAAGACCTTGACCGGAAAAACCATCACCCTTGAGGTTGAATCGTC 20997349 Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 ||||| || || | || || || || || ||||||||||| || || ||||| Sbjct 20997350 TGATACGATTGATAATGTCAAGGCCAAGATCCAGGACAAAGAGGGTATCCCTCCTGATCA 20997409 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGC-GATTACA 25352 ||| || || || | | || |||||||| || |||| ||||| | ||| ||||||| Sbjct 20997410 GCAGAGGCTTATCTTTGCAGGGAAACAACTTGAGGATGGTAGAACCCT-AGCTGATTACA 20997468 Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 | || || ||||| || ||| ||||||| ||| | |||||||||| || Sbjct 20997469 ACATCCAGAAAGAGTCTACCCTTCATTTGGTGCTTCGATTGAGAGGTGG 20997517 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || || || | || ||||| ||||||| | || || ||| | Sbjct 17161445 ATGCAAATCTTCGTGAAGACTCTCACTGGAAAGACGATCACCCTTGAGGTGGAAAGCTCT 17161504 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 |||||||| || | || || || ||| || || ||| | || || || || || Sbjct 17161505 GATACTATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGAGCATTCCACCAGACCAA 17161564 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGC-GATTACAA 25353 || || ||||||| | |||||||| || || |||| ||| | | ||| |||||||| Sbjct 17161565 CAGAGGCTCATTTTTGCTGGCAAACAGCTTGAGGATGGCCGAACTTT-AGCAGATTACAA 17161623 Query 25354 TATTCAAAAAGAATCCACCATTCATTTAGTG 25384 |||||| |||||||||||| ||||||| ||| Sbjct 17161624 TATTCAGAAAGAATCCACCCTTCATTTGGTG 17161654 Score = 89.7 bits (98), Expect = 5e-13 Identities = 139/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233 ||||||| | ||||| || ||| | || || || | || || | ||||| ||| | Sbjct 20998430 CATGCAAATATTTGTGAAGACACTTACTGGGAAGACTATTACCTTAGAAGTGGAAAGCTC 20998489 Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 || || || || | || ||| ||| ||| ||||| |||||||| || || ||||| Sbjct 20998490 TGACACAATTGATAATGTGAAAGCAAAGATTCAGGATAAGGAGGGTATTCCCCCAGATCA 20998549 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353 |||||| || |||| | ||||| || | || |||| | | | | | |||||||| Sbjct 20998550 GCAAAGGCTTATTTTTGCTGGCAAGCAGTTGGAGGATGGTCGTACTTTGGCAGATTACAA 20998609 Query 25354 TATTCAAAAAGAATCCACC 25372 |||||| |||||||| ||| Sbjct 20998610 TATTCAGAAAGAATCTACC 20998628 >seq5 Length=48169137 Score = 89.7 bits (98), Expect = 5e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230 || |||||| | || || ||||| ||||||| ||| | || || | || || || Sbjct 36920506 CATCATGCAGATCTTCGTGAAAACCCTAACCGGCAAAACCATTACCCTAGAGGTAGAGAG 36920565 Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290 |||||| ||||| | || || ||||||| || || |||||||| || || || Sbjct 36920566 TTCCGATACAATCGACAACGTGAAGGCAAAAATTCAAGACAAGGAGGGTATTCCTCCAGA 36920625 Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350 |||||| || | || | || ||| |||||| | ||||| | || | | ||||| Sbjct 36920626 CCAGCAACGATTGATCTTCGCCGGAAAACAATTAGAAGACGGAAGGACACTGGCGGATTA 36920685 Query 25351 CAATATTCAAAAAGAATCCACCATTCATTTAGTG 25384 |||||| ||||| ||||| || ||||||| ||| Sbjct 36920686 CAATATCCAAAAGGAATCAACGCTTCATTTGGTG 36920719 >seq2 Length=36634854 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 25172 AACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCC 25231 || ||||| | || || ||||| |||| || ||| | ||||| |||| || ||| || Sbjct 8273354 AAGATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACAATCACCCTCGAGGTTGAATCC 8273413 Query 25232 AACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGAT 25291 || || ||||| | || ||| ||||| || || || || || || || || Sbjct 8273414 TCTGACACAATCGACAACGTCAAAGCCAAAATCCAAGACAAGGAAGGGATTCCACCGGAC 8273473 Query 25292 CAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTAC 25351 || ||| ||||||| | || ||| |||||||||||||| | | | | || ||| ||| Sbjct 8273474 CAACAACGACTCATCTTCGCCGGAAAACAACTCGAAGACGGCCGCACTCTCGCCGACTAC 8273533 Query 25352 AATATTCAAAAAGAATCCACCATTCA 25377 || || || || ||||| || |||| Sbjct 8273534 AACATCCAGAAGGAATCAACTCTTCA 8273559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445054747652640