Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq55 127 3e-23 >seq55 Length=606834 Score = 127 bits (140), Expect = 3e-23 Identities = 334/504 (66%), Gaps = 18/504 (4%) Strand=Plus/Plus Query 1455776 ATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCT 1455835 || |||||||||||| |||||| |||| ||||| || ||||||||||| || || || | Sbjct 249702 ATTTGGGAAATGTACAAAAAAG-CCGAAGCCTCATTCTGGACCGCCGAAGAAGTTGATTT 249760 Query 1455836 CGGCGCCGACACGGTC-----CACTGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATC 1455890 ||| | || || ||| | | |||| ||| || || || | Sbjct 249761 ATC-----ACAAGATCTTCAACATTGGAACAATTTAACTGACGGCGAACGACACTTTGTA 249815 Query 1455891 AAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGG 1455950 ||||| || || |||| ||||||| ||| |||||||| ||||| || || || Sbjct 249816 TCCCACGTTCTTGCATTTT-TCGCCGCATCCGACGGCATCGTTTTAGAGAATCTTGCTGG 249874 Query 1455951 CCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGC 1456010 | || |||||||| || ||| | ||||||| ||| |||||||| || || ||||| Sbjct 249875 AAGATTCATGAAAGAAGTTCAAGTTTCAGAGGCGCGTGCTTTTTACGGTTTTCAAATCGC 249934 Query 1456011 CATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCC 1456070 || || || || || ||||||| || ||||| | || || || | | || | Sbjct 249935 GATTGAGAATATACATTCTGAAATGTATAGTCTCCTTCTTGAAACGTATATAAGCGATTC 249994 Query 1456071 GGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGC 1456130 ||| |||||| | | | |||| || || || ||| | || | | | || || || Sbjct 249995 GGTTGAGAAGAATCGTTTGTTTCATGCTATTGAGACGATTCCTTGTATTCGTAAGAAAGC 250054 Query 1456131 CGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTC 1456190 || ||||| |||| |||||| | | || ||| ||||| || | |||| Sbjct 250055 GGATTGGGCTTTGAAATGGATCGA-TTCGTCGGATTCG----TTTGCTGAAAGAATCGTT 250109 Query 1456191 GGCTTTGC-CGCGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTC 1456249 | ||||| |||| || || || |||||||| || |||||||| || || |||||||| Sbjct 250110 GCTTTTGCTTGCGTTGAAGGTATTTTTTTCTCTGGTAGTTTCTGTGCAATTTTTTGGCTT 250169 Query 1456250 AAGAAGCGCGGCCTCATGCCCGGT 1456273 || || || || | ||||| ||| Sbjct 250170 AAAAAACGTGGTTTAATGCCTGGT 250193 Score = 127 bits (140), Expect = 3e-23 Identities = 334/504 (66%), Gaps = 18/504 (4%) Strand=Plus/Plus Query 1455776 ATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCT 1455835 || |||||||||||| |||||| |||| ||||| || ||||||||||| || || || | Sbjct 258385 ATTTGGGAAATGTACAAAAAAG-CCGAAGCCTCATTCTGGACCGCCGAAGAAGTTGATTT 258443 Query 1455836 CGGCGCCGACACGGTC-----CACTGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATC 1455890 ||| | || || ||| | | |||| ||| || || || | Sbjct 258444 ATC-----ACAAGATCTTCAACATTGGAACAATTTAACTGACGGCGAACGACACTTTGTA 258498 Query 1455891 AAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGG 1455950 ||||| || || |||| ||||||| ||| |||||||| ||||| || || || Sbjct 258499 TCCCACGTTCTTGCATTTT-TCGCCGCATCCGACGGCATCGTTTTAGAGAATCTTGCTGG 258557 Query 1455951 CCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGC 1456010 | || |||||||| || ||| | ||||||| ||| |||||||| || || ||||| Sbjct 258558 AAGATTCATGAAAGAAGTTCAAGTTTCAGAGGCGCGTGCTTTTTACGGTTTTCAAATCGC 258617 Query 1456011 CATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCC 1456070 || || || || || ||||||| || ||||| | || || || | | || | Sbjct 258618 GATTGAGAATATACATTCTGAAATGTATAGTCTCCTTCTTGAAACGTATATAAGCGATTC 258677 Query 1456071 GGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGC 1456130 ||| |||||| | | | |||| || || || ||| | || | | | || || || Sbjct 258678 GGTTGAGAAGAATCGTTTGTTTCATGCTATTGAGACGATTCCTTGTATTCGTAAGAAAGC 258737 Query 1456131 CGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTC 1456190 || ||||| |||| |||||| | | || ||| ||||| || | |||| Sbjct 258738 GGATTGGGCTTTGAAATGGATCGA-TTCGTCGGATTCG----TTTGCTGAAAGAATCGTT 258792 Query 1456191 GGCTTTGC-CGCGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTC 1456249 | ||||| |||| || || || |||||||| || |||||||| || || |||||||| Sbjct 258793 GCTTTTGCTTGCGTTGAAGGTATTTTTTTCTCTGGTAGTTTCTGTGCAATTTTTTGGCTT 258852 Query 1456250 AAGAAGCGCGGCCTCATGCCCGGT 1456273 || || || || | ||||| ||| Sbjct 258853 AAAAAACGTGGTTTAATGCCTGGT 258876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177123787750574