Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq55 269 2e-67 seq104 158 1e-33 >seq55 Length=606834 Score = 269 bits (298), Expect = 2e-67 Identities = 592/873 (68%), Gaps = 17/873 (2%) Strand=Plus/Plus Query 43707 TGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTT 43766 |||| |||||| |||| | | | || ||| |||||||||||||||| | || ||||| | Sbjct 249679 TGTTCCCAATTGAATACCCTAAAATTTGGGAAATGTACAAAAAAGCCGAAGCCTCATTCT 249738 Query 43767 GGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGCATTAAAACCAC 43826 |||| || |||||||||||||| | |||| | |||||||| ||| || || Sbjct 249739 GGACCGCCGAAGAAGTTGATTTATCACAAGATCTTCAACATTGGAACA-ATTTAACTGAC 249797 Query 43827 AA-GAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTC 43885 ||| ||| ||| |||| ||| | || ||||| || || |||||| || || Sbjct 249798 GGCGAACGACACTTTGTATCCCACGTTCTTGCATTTTTCGCCGCATCCGACGGCATCGTT 249857 Query 43886 AATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTT 43945 || ||| | | | | | || | ||||||||||| | |||| || || |||| Sbjct 249858 TTAGAGAATCTTGCTGGAAGATTCATGAAAGAAGTTCAAGTTTCAGAGGCGCGTGCTTTT 249917 Query 43946 TATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGAT 44005 || || |||||||| || || || ||||| ||||| |||||||| ||||| || | || Sbjct 249918 TACGGTTTTCAAATCGCGATTGAGAATATACATTCTGAAATGTATAGTCTCCTTCTTGAA 249977 Query 44006 ACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACCT 44065 ||||| || | ||| | |||||| |||| |||||| |||| || || || | ||| Sbjct 249978 ACGTATATAAGCGATTCGGTTGAGAAGAATCGTTTGTTTCATGCTATTGAGACGATTCCT 250037 Query 44066 GCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGATTCTTTTGGA 44125 ||| | ||||| || ||||| | |||||||| |||| ||||| |||| Sbjct 250038 TGTATTCGTAAGAAAGCGGATTGGGCTTTGAAATGGATCGATTCGTCGGATTCGTTTGCT 250097 Query 44126 GAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCG-GC 44184 ||| || | || || ||||| || ||||| ||||| || || || | |||| | || Sbjct 250098 GAAAGAATCGTTGCTTTTGCTTGCGTTGAAGGTATTTTTTTCTCTGG-TAGTTTCTGTGC 250156 Query 44185 CATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAAT 44244 || |||||| | || ||||| ||||| |||||||| || || |||||||| ||| | || Sbjct 250157 AATTTTTTGGCTTAAAAAACGTGGTTTAATGCCTGGTTTAACTTTTTCAAACGAGCTTAT 250216 Query 44245 AAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTG-TTACTTGGATATCTAGGAG 44303 ||||| ||||| | ||||| ||||||||||| ||| || || ||| |||| Sbjct 250217 TTCGCGTGACGAAGGACTTCATTGTGATTTTGCTTGTTTGCTTTATTCACTATTGAGGA- 250275 Query 44304 ACGATAAGCCTTCATGTAAGA-CAATTACAG-ATATTGTTGTAGAGGCAGTAAAGAT--A 44359 |||| | | | | || | | | || | ||||| || || || |||| | Sbjct 250276 ---ATAAAC--TGAGTGAGGAGCGAGTGAAGAAGATTGTGAGTGATGCGGTTGAGATTGA 250330 Query 44360 GAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAATGAATGAACTTTTG 44419 || || | | || | || || | || || | || ||||||| |||| Sbjct 250331 GAGGGAGTTTGTTTGTGACGCGC-TTCCGTG-CGCGTTGGTCGGGATGAATGGTGATTTG 250388 Query 44420 ATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTGGGTTGCGATAAA 44479 |||| ||| |||||||| | | |||| ||| | || | || || ||||| | ||| Sbjct 250389 ATGAGCCAGTATATTGAGTTCGTTGCCGATAGGTTGTTGGGTGAGCTTGGTTGTGGGAAA 250448 Query 44480 CACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACA 44539 |||| ||| || || || ||||||| ||||| ||||| | |||| || || Sbjct 250449 GTTTATAATGTTCAGAATCCTTTTGATTGGATGGAGTTGATTTCTCTTCAAGGGAAGACT 250508 Query 44540 AACTTTTTTGAAAAACGCGTTGGAGAATATCAG 44572 ||||||||||| || |||||||| ||||||||| Sbjct 250509 AACTTTTTTGAGAAGCGCGTTGGGGAATATCAG 250541 Score = 269 bits (298), Expect = 2e-67 Identities = 592/873 (68%), Gaps = 17/873 (2%) Strand=Plus/Plus Query 43707 TGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTT 43766 |||| |||||| |||| | | | || ||| |||||||||||||||| | || ||||| | Sbjct 258362 TGTTCCCAATTGAATACCCTAAAATTTGGGAAATGTACAAAAAAGCCGAAGCCTCATTCT 258421 Query 43767 GGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGCATTAAAACCAC 43826 |||| || |||||||||||||| | |||| | |||||||| ||| || || Sbjct 258422 GGACCGCCGAAGAAGTTGATTTATCACAAGATCTTCAACATTGGAACA-ATTTAACTGAC 258480 Query 43827 AA-GAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTC 43885 ||| ||| ||| |||| ||| | || ||||| || || |||||| || || Sbjct 258481 GGCGAACGACACTTTGTATCCCACGTTCTTGCATTTTTCGCCGCATCCGACGGCATCGTT 258540 Query 43886 AATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTT 43945 || ||| | | | | | || | ||||||||||| | |||| || || |||| Sbjct 258541 TTAGAGAATCTTGCTGGAAGATTCATGAAAGAAGTTCAAGTTTCAGAGGCGCGTGCTTTT 258600 Query 43946 TATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGAT 44005 || || |||||||| || || || ||||| ||||| |||||||| ||||| || | || Sbjct 258601 TACGGTTTTCAAATCGCGATTGAGAATATACATTCTGAAATGTATAGTCTCCTTCTTGAA 258660 Query 44006 ACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACCT 44065 ||||| || | ||| | |||||| |||| |||||| |||| || || || | ||| Sbjct 258661 ACGTATATAAGCGATTCGGTTGAGAAGAATCGTTTGTTTCATGCTATTGAGACGATTCCT 258720 Query 44066 GCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGATTCTTTTGGA 44125 ||| | ||||| || ||||| | |||||||| |||| ||||| |||| Sbjct 258721 TGTATTCGTAAGAAAGCGGATTGGGCTTTGAAATGGATCGATTCGTCGGATTCGTTTGCT 258780 Query 44126 GAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCG-GC 44184 ||| || | || || ||||| || ||||| ||||| || || || | |||| | || Sbjct 258781 GAAAGAATCGTTGCTTTTGCTTGCGTTGAAGGTATTTTTTTCTCTGG-TAGTTTCTGTGC 258839 Query 44185 CATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAAT 44244 || |||||| | || ||||| ||||| |||||||| || || |||||||| ||| | || Sbjct 258840 AATTTTTTGGCTTAAAAAACGTGGTTTAATGCCTGGTTTAACTTTTTCAAACGAGCTTAT 258899 Query 44245 AAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTG-TTACTTGGATATCTAGGAG 44303 ||||| ||||| | ||||| ||||||||||| ||| || || ||| |||| Sbjct 258900 TTCGCGTGACGAAGGACTTCATTGTGATTTTGCTTGTTTGCTTTATTCACTATTGAGGA- 258958 Query 44304 ACGATAAGCCTTCATGTAAGA-CAATTACAG-ATATTGTTGTAGAGGCAGTAAAGAT--A 44359 |||| | | | | || | | | || | ||||| || || || |||| | Sbjct 258959 ---ATAAAC--TGAGTGAGGAGCGAGTGAAGAAGATTGTGAGTGATGCGGTTGAGATTGA 259013 Query 44360 GAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAATGAATGAACTTTTG 44419 || || | | || | || || | || || | || ||||||| |||| Sbjct 259014 GAGGGAGTTTGTTTGTGACGCGC-TTCCGTG-CGCGTTGGTCGGGATGAATGGTGATTTG 259071 Query 44420 ATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTGGGTTGCGATAAA 44479 |||| ||| |||||||| | | |||| ||| | || | || || ||||| | ||| Sbjct 259072 ATGAGCCAGTATATTGAGTTCGTTGCCGATAGGTTGTTGGGTGAGCTTGGTTGTGGGAAA 259131 Query 44480 CACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACA 44539 |||| ||| || || || ||||||| ||||| ||||| | |||| || || Sbjct 259132 GTTTATAATGTTCAGAATCCTTTTGATTGGATGGAGTTGATTTCTCTTCAAGGGAAGACT 259191 Query 44540 AACTTTTTTGAAAAACGCGTTGGAGAATATCAG 44572 ||||||||||| || |||||||| ||||||||| Sbjct 259192 AACTTTTTTGAGAAGCGCGTTGGGGAATATCAG 259224 >seq104 Length=244920 Score = 158 bits (174), Expect = 1e-33 Identities = 262/372 (70%), Gaps = 5/372 (1%) Strand=Plus/Minus Query 43914 AAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATA 43973 ||||||||||| | ||||||| || ||| || |||| ||||| || || || |||| Sbjct 172432 AAGAAGTTCAAGTTTCAGAAGCGCGTGCTTTCTACAGGTTCCAAATCGCGATTGAGAATA 172373 Query 43974 TTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGC 44033 | ||||| |||||||| ||||| || | || || || || | ||| | |||||| Sbjct 172372 TACATTCTGAAATGTATAGTCTCCTTCTTGAAACATATATAAGCGATTTGGTTGAGAAGA 172313 Query 44034 ATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCC 44093 || | |||||| |||| || || || | ||| ||| | ||||| || ||||| Sbjct 172312 ATTGTTTGTTTCATGCTATTGAGACGATTCCTTGTATTCGTAAGAAAGCGGATTGGGCTT 172253 Query 44094 TTAAATGGATAAATTCAAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGG 44153 | |||||||| |||| |||| ||| ||| || | || || ||||| || | Sbjct 172252 TGAAATGGATCGATTC-GTCGATTTGATTGTTGAAAGAATCGTTGCTTTTGCTTGCGTTG 172194 Query 44154 AAGGCATTTTCTTTTCAGGATCGTTTGCG-GCCATATTTTGGTTAAAGAAACGAGGTTTG 44212 |||| ||||| || || | | |||| | || ||||||||| | || ||||| ||||| Sbjct 172193 AAGGTATTTTTTTCTCTAG-TAGTTTATGTGCGATATTTTGGCTTAAAAAACGTGGTTTA 172135 Query 44213 ATGCCTGGGTTGACGTTTTCAAATGAG-TTAATAAGTCGTGATGAAGGCTTACATTGCGA 44271 |||| ||| || || |||||||| ||| ||| | || |||| ||||| | ||||| || Sbjct 172134 ATGCATGGTTTAACTTTTTCAAACGAGCTTATTTTGT-GTGACGAAGGACTTCATTGTGA 172076 Query 44272 TTTTGCTTGCTT 44283 ||| ||||| || Sbjct 172075 TTTCGCTTGTTT 172064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397421476847635