Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq6 93.3 4e-14 seq4 93.3 4e-14 >seq6 Length=59463898 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 |||||||| | || || |||||||| || ||||| || | | | ||| | || || Sbjct 17161425 ACCAAATGAAGGGTTGACTCTTTTTGGATGTTGTAATCAGCAAGGGTACGCCCATCCTCC 17161366 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| || || || ||||||||||||| || || || || | || || || || Sbjct 17161365 AGCTGCTTGCCTGCAAAAATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGA 17161306 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| || | | |||| || |||| |||||||| ||||| || | |||| Sbjct 17161305 ATCTTGGCCTTAACATTGTCTATGGTATCTGAACTCTCAACTTCGAGAGTGATGGTTTTG 17161246 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || |||||||| |||||||| Sbjct 17161245 CCAGTGAGGGTCTTCACAAATATTTGCAT 17161217 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| || | |||||| | || ||||| | || || |||||||| || ||||| || Sbjct 20997291 TGCCACCTCTCAACCGAAGCACTAAATGAAGGGTGGATTCTTTTTGGATGTTGTAATCAG 20997232 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 | | | || | ||||| | |||||||||||| | || || | |||||||| || | Sbjct 20997231 CAAGGGTACGGCCATCTTCTAATTGTTTACCGGCGAAGATAAGTCTTTGTTGATCTGGTG 20997172 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | || || || || |||||| ||||| | | |||| || || | || | Sbjct 20997171 GGATCCCTTCCTTGTCTTGGATCTTAGCTTTCACGTTGTCTATGGTATCGGAACTCTCCA 20997112 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || || || || | |||||| |||| |||||||| ||||||||||| Sbjct 20997111 CCTCAAGGGTGATGGTTTTGCCGGTCAATGTTTTCACGAAGATTTGCAT 20997063 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTC 27097 |||||||| | || || ||||| ||||||||||| || ||| | ||| || | || || Sbjct 17161653 ACCAAATGAAGGGTGGATTCTTTCTGAATATTGTAATCTGCTAAAGTTCGGC-CATCCTC 17161595 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 |||||||| || || ||||||| | |||||| || || || | | ||| || || Sbjct 17161594 AAGCTGTTTGCCAGCAAAAATGAGCCTCTGTTGGTCTGGTGGAATGCTCTCCTTGTCCTG 17161535 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 |||||| || | | || | ||| || | | ||| || || || || || | || Sbjct 17161534 AATCTTGGCCTTGACATTGTCAATAGTATCAGAGCTTTCCACCTCAAGGGTGATCGTCTT 17161475 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || ||||| ||||| ||||||||||| Sbjct 17161474 TCCAGTGAGAGTCTTCACGAAGATTTGCAT 17161445 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 ||||| |||| || | || || ||||| || || ||||| || || | | || | Sbjct 17161887 CGCAAAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGCCAAGGTTCGACCA 17161828 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| |||||||| || || | ||||| | ||| ||||| || || | ||||||||| Sbjct 17161827 TCTTCAAGCTGTTTTCCAGCAAAGATGAGCCTCTGCTGATCAGGTGGGATACCCTCTTTG 17161768 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||||| || | | || | ||||| | |||||||| || || || Sbjct 17161767 TCTTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAACTCTCAACTTCAAGGGTGATG 17161708 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || || || || || || || ||||||||||| Sbjct 17161707 GTCTTTCCTGTGAGGGTCTTGACGAAGATTTGCAT 17161673 >seq4 Length=49191682 Score = 93.3 bits (102), Expect = 4e-14 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTC 27091 ||||| || | || | || || || || || || |||||||| ||| | || ||| | Sbjct 14093100 CGCAACACAAGGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCTAAGGT-GCGGCC 14093158 Query 27092 GTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTT 27151 ||||| ||||| || |||||| | ||||| | ||| || || || || | || || || Sbjct 14093159 ATCTTCAAGCTGCTTTCCGGCGAAGATGAGTCTCTGCTGGTCTGGTGGGATTCCTTCCTT 14093218 Query 27152 ATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTAT 27211 || |||||| |||| | | || | ||||| | | ||||||||| ||||| || Sbjct 14093219 GTCTTGGATCTTAGCCTTCACGTTGTCGATGGTGTCAGAGCTTTCAACTTCGAGAGTGAT 14093278 Query 27212 AGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251 | || || || || || ||||||||||| |||||| || Sbjct 14093279 GGTCTTACCGGTGAGGGTCTTCACAAAGATCTGCATACCT 14093318 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 ||||||| || | || | || | ||| | || || || || || || ||||||||| Sbjct 14093542 TGCCTCCACGAAGACGGAGGACGAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGG 14093601 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 | | | || |||| || ||||| || |||||| | |||||||| || || ||||| | Sbjct 14093602 CAAGGGTACGGCCGTCCTCAAGCTGCTTTCCGGCGAAGATGAGACGTTGCTGGTCCGGAG 14093661 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | || || || || ||||||| || | | | || | ||| || | || | Sbjct 14093662 GAATTCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTATCGATAGTATCAGAACTCTCTA 14093721 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || ||||| || | ||||| || || |||||||| ||||||||||| Sbjct 14093722 CCTCGAGAGTGATTGTCTTGCCGGTGAGGGTTTTCACGAAGATTTGCAT 14093770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424897490065224