Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1 118 1e-21 seq7120 84.2 3e-11 seq5 84.2 3e-11 seq6 82.4 9e-11 >seq1 Length=48359943 Score = 118 bits (130), Expect = 1e-21 Identities = 280/417 (67%), Gaps = 12/417 (3%) Strand=Plus/Minus Query 14095 GTCAAGGATATCAATGCGGTTCGTCGCCGCGATGACAACGATGCCCGTCTCGTTATCAAA 14154 ||| || || ||| | ||| || || || ||||||| ||| || || | ||||| Sbjct 19053856 GTCGAGAATGTCAGCCCTGTTGGTTGCTGCAATGACAATGATTCCGGTATTACCCTCAAA 19053797 Query 14155 GCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCAGGCAT 14214 |||||||| || ||||| ||||| |||| ||| ||||| | |||||||||| | Sbjct 19053796 TCCATCCATTTCTGTCAAAAGTTGGTTGAGGGTCTGTTCCCTTTCATCATTCCCTCC--- 19053740 Query 14215 ACCACCCGCACTGC---GTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACA 14271 |||| || ||| ||||| | || || || || |||||||| | ||||| ||||| Sbjct 19053739 ACCAATTCCAGTGCCTCGTTGCCTTCCTACAGCATCGATTTCATCAACAAAAACAATACA 19053680 Query 14272 TGGTTGATTTTCACGGGCAACTTCA--AAGATATCTCGCACTCTCTTGGCACCGACACCC 14329 || ||| || || |||| || | |||||| |||| ||||| ||||| Sbjct 19053679 AGGAGCATTCTCTTTTGC--CTTCTTGAATAAATCTCGAACTCGAGAAGCACCAACACCA 19053622 Query 14330 ACAAACATCTCCACAAAATTGGCGGCGGAACATTG-GATGAAGGGGACGTTAGATTCACC 14388 ||||||||||| ||||| | | | | | |||| || || || ||| | |||||| Sbjct 19053621 ACAAACATCTCAACAAACTCAGAACCTG-AGATTGAGAAAAATGGAACGCCTGCTTCACC 19053563 Query 14389 CGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACC 14448 || || || ||| | | |||||||| ||||| ||| ||| ||||||| | || Sbjct 19053562 AGCAATAGCCTTGGCTAATAACGTCTTCCCAGTCCCCGGTGGACCTACGAGAAGAACTCC 19053503 Query 14449 ACGTGGGATCCTGGCACCACTGCCAAAGTAGCGTTCAGGTTGTTTAAGGAAGTCCAC 14505 ||| || | |||||| | || | | | ||||| | |||||| || ||||| Sbjct 19053502 TTTTGGAATGCGAGCACCAATAGCAGTGAACCTCTCAGGCTTTTTAAGAAACTCCAC 19053446 >seq7120 Length=14710 Score = 84.2 bits (92), Expect = 3e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 180855 AAACTCCGAAGAATAGATGTTCGTCAACTTGGCACCGTAGCCATTGCGTCCACCAACAAT 180914 |||||| | ||| |||| ||||| | ||| ||||| || ||||| ||||||||| | | Sbjct 6376 AAACTCAGTCGAAAAGATATTCGTGAGCTTCGCACCATAACCATTACGTCCACCAGTAGT 6317 Query 180915 TCTCTTCTTGTTGTCATCGTAGTTTGTACTCGTGAGGAGGTGACCAAAG 180963 | ||||| || ||||||||||| |||| || || |||||||| ||| Sbjct 6316 TTTCTTCACATTATCATCGTAGTTACTACTAGTAAGAAGGTGACCGAAG 6268 >seq5 Length=48169137 Score = 84.2 bits (92), Expect = 3e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 180855 AAACTCCGAAGAATAGATGTTCGTCAACTTGGCACCGTAGCCATTGCGTCCACCAACAAT 180914 |||||| | ||| |||| ||||| | ||| ||||| || ||||| ||||||||| | | Sbjct 17100777 AAACTCAGTCGAAAAGATATTCGTGAGCTTCGCACCATAACCATTACGTCCACCAGTAGT 17100836 Query 180915 TCTCTTCTTGTTGTCATCGTAGTTTGTACTCGTGAGGAGGTGACCAAAG 180963 | ||||| || ||||||||||| |||| || || |||||||| ||| Sbjct 17100837 TTTCTTCACATTATCATCGTAGTTACTACTAGTAAGAAGGTGACCGAAG 17100885 >seq6 Length=59463898 Score = 82.4 bits (90), Expect = 9e-11 Identities = 172/255 (67%), Gaps = 6/255 (2%) Strand=Plus/Minus Query 14095 GTCAAGGATATCAATGCGGTTCGTCGCCGCGATGACAACGATGCCCGTCTCGTTATCAAA 14154 |||||| || || | ||| || || || | ||||| ||| || || | ||||| Sbjct 13715569 GTCAAGAATGTCGGCCCTGTTAGTTGCTGCAACGACAATGATACCAGTATTACCCTCAAA 13715510 Query 14155 GCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCAGGCAT 14214 |||||||| || ||||| |||||||||| ||||||||| | ||||||||| | Sbjct 13715509 TCCATCCATTTCTGTCAAAAGTTGATTGAGGGTTTGTTCTCTCTCATCATTCCCTCC--- 13715453 Query 14215 ACCA---CCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACA 14271 |||| || | | | ||| | || || || ||||||||||| | || || || || Sbjct 13715452 ACCAATTCCTGTCCCTCTTTGTCTTCCAACAGCATCAATTTCATCAACAAAGACAATGCA 13715393 Query 14272 TGGTTGATTTTCACGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCAC 14331 || ||| || ||| || || | ||| || || | ||||||| ||| || Sbjct 13715392 AGGAGCATTCTCTTTGGCCTTTTTGAATAAATCACGGACACGAGAAGCACCGATACCAAC 13715333 Query 14332 AAACATCTCCACAAA 14346 ||||||||| ||||| Sbjct 13715332 AAACATCTCAACAAA 13715318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618380105154120