Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq7120 100 1e-16 seq5 100 1e-16 >seq7120 Length=14710 Score = 100 bits (110), Expect = 1e-16 Identities = 143/198 (72%), Gaps = 4/198 (2%) Strand=Plus/Minus Query 65087 CGTGTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATTC 65146 || || ||||| ||||| ||||| | | | ||| || ||||| |||| ||||| | Sbjct 9818 CGAGTACCAAATTGACCGTTTGGTTTGAGAAGATTGATGTTGTTGCTGCCAACAAAATCC 9759 Query 65147 TGAGCCATTCCGATAATTGCTGCATTTAA-ACTCGCTTCACCGTGATGATATCCTGAATG 65205 || |||||||| ||||||| ||| || ||| |||||| ||||| || | || || Sbjct 9758 TGTGCCATTCCAATAATTG-TGCTAGCAAGACTTTGTTCACCATGATGGTAACAAGAGTG 9700 Query 65206 TTCAGAGACATATCCACTAAATTGAGCAACTTTTATTTCCGTTGTTAAATTCTTTTTAAA 65265 ||||| ||||| ||| ||||||| ||||||||||||| | || || || ||||| Sbjct 9699 CTCAGACACATAACCAATAAATTGGCCAACTTTTATTTCTTTGAACAACTTTTTCTTAAA 9640 Query 65266 TG--CAGAATACAATATT 65281 || ||||| | ||| || Sbjct 9639 TGAACAGAAAAGAATCTT 9622 >seq5 Length=48169137 Score = 100 bits (110), Expect = 1e-16 Identities = 143/198 (72%), Gaps = 4/198 (2%) Strand=Plus/Plus Query 65087 CGTGTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATTC 65146 || || ||||| ||||| ||||| | | | ||| || ||||| |||| ||||| | Sbjct 17097335 CGAGTACCAAATTGACCGTTTGGTTTGAGAAGATTGATGTTGTTGCTGCCAACAAAATCC 17097394 Query 65147 TGAGCCATTCCGATAATTGCTGCATTTAA-ACTCGCTTCACCGTGATGATATCCTGAATG 65205 || |||||||| ||||||| ||| || ||| |||||| ||||| || | || || Sbjct 17097395 TGTGCCATTCCAATAATTG-TGCTAGCAAGACTTTGTTCACCATGATGGTAACAAGAGTG 17097453 Query 65206 TTCAGAGACATATCCACTAAATTGAGCAACTTTTATTTCCGTTGTTAAATTCTTTTTAAA 65265 ||||| ||||| ||| ||||||| ||||||||||||| | || || || ||||| Sbjct 17097454 CTCAGACACATAACCAATAAATTGGCCAACTTTTATTTCTTTGAACAACTTTTTCTTAAA 17097513 Query 65266 TG--CAGAATACAATATT 65281 || ||||| | ||| || Sbjct 17097514 TGAACAGAAAAGAATCTT 17097531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235659528761550