Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq55 228 7e-55 seq104 129 5e-25 >seq55 Length=606834 Score = 228 bits (252), Expect = 7e-55 Identities = 428/623 (69%), Gaps = 11/623 (2%) Strand=Plus/Minus Query 4545 AAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTT 4604 ||||| |||||||||||||| | |||||||| | ||| || ||||| ||||| ||| Sbjct 250255 AAACAAGCAAAATCACAATGAAGTCCTTCGTCACGCGAAATAAGCTCGTTTGAAAAAGTT 250196 Query 4605 AATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAG 4664 || || ||||||||||| | |||||||||||||| || || || ||||| || Sbjct 250195 AAACCAGGCATTAAACCACGTTTTTTAAGCCAAAAAATTGCACAGAAACTACCAGAGAAA 250136 Query 4665 AATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCT 4724 || || ||||| ||| ||||| || || | || | ||||| | || Sbjct 250135 AAAATACCTTCAACGCAAGCAAAAGCAACGATTCTTTCAGCAAACGAATCCGACGAATCG 250076 Query 4725 TTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCG 4784 |||||||| || ||||| | ||||| || || || ||||| || | ||||| Sbjct 250075 ---ATCCATTTCAAAGCCCAATCCGCTTTCTTACGAATACAAGGAATCGTCTCAATAGCA 250019 Query 4785 TTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATAC 4844 | ||| || | | || |||| | || ||||| || || | || || |||||| Sbjct 250018 TGAAACAAACGATTCTTCTCAACCGAATCGCTTATATACGTTTCAAGAAGGAGACTATAC 249959 Query 4845 ATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAA-GCATCTAGCTTCTGT 4903 ||||||||||||||||| || || || || ||||| |||||||| ||| | || |||| Sbjct 249958 ATTTCAGAATGTATATTCTCAATCGCGATTTGAAAACCGTAAAAAGCA-CGCGCCTCTGA 249900 Query 4904 TACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGC 4963 ||||||||||| || |||||| | | | || || || || ||||| || Sbjct 249899 AACTTGAACTTCTTTCATGAATCTTCCAGCAAGATTCTCTAAAACGATGCCGTCGGATGC 249840 Query 4964 TGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCG---TCAGGCTTAAGTTTTTT 5020 || ||||| || | ||| || |||| ||||| ||||| |||| |||| || || Sbjct 249839 GGCGAAAAATGCAAGAACGTGGGATACAAAGTGTCGTTCGCCGTCAG--TTAAATTGTT- 249783 Query 5021 CCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGC 5080 ||| || | | ||||| | ||||||||||||||| | ||||| || || ||||| || Sbjct 249782 CCAATGTTGAAGATCTTGTGATAAATCAACTTCTTCGGCGGTCCAGAATGAGGCTTCGGC 249723 Query 5081 TTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAATCTGTTGTC 5140 |||||||||||| |||||| | ||| || | ||| || | || ||| | || Sbjct 249722 TTTTTTGTACATTTCCCAAATTTTAGGGTATTCAATTGGGAACATACAAAAACGGTCTGG 249663 Query 5141 GTTAGGTGTAAGAAGCGGTTCTT 5163 ||| || | |||||| || |||| Sbjct 249662 GTTTGGAGCAAGAAGTGGCTCTT 249640 Score = 228 bits (252), Expect = 7e-55 Identities = 428/623 (69%), Gaps = 11/623 (2%) Strand=Plus/Minus Query 4545 AAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTT 4604 ||||| |||||||||||||| | |||||||| | ||| || ||||| ||||| ||| Sbjct 258938 AAACAAGCAAAATCACAATGAAGTCCTTCGTCACGCGAAATAAGCTCGTTTGAAAAAGTT 258879 Query 4605 AATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAG 4664 || || ||||||||||| | |||||||||||||| || || || ||||| || Sbjct 258878 AAACCAGGCATTAAACCACGTTTTTTAAGCCAAAAAATTGCACAGAAACTACCAGAGAAA 258819 Query 4665 AATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCT 4724 || || ||||| ||| ||||| || || | || | ||||| | || Sbjct 258818 AAAATACCTTCAACGCAAGCAAAAGCAACGATTCTTTCAGCAAACGAATCCGACGAATCG 258759 Query 4725 TTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCG 4784 |||||||| || ||||| | ||||| || || || ||||| || | ||||| Sbjct 258758 ---ATCCATTTCAAAGCCCAATCCGCTTTCTTACGAATACAAGGAATCGTCTCAATAGCA 258702 Query 4785 TTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATAC 4844 | ||| || | | || |||| | || ||||| || || | || || |||||| Sbjct 258701 TGAAACAAACGATTCTTCTCAACCGAATCGCTTATATACGTTTCAAGAAGGAGACTATAC 258642 Query 4845 ATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAA-GCATCTAGCTTCTGT 4903 ||||||||||||||||| || || || || ||||| |||||||| ||| | || |||| Sbjct 258641 ATTTCAGAATGTATATTCTCAATCGCGATTTGAAAACCGTAAAAAGCA-CGCGCCTCTGA 258583 Query 4904 TACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGC 4963 ||||||||||| || |||||| | | | || || || || ||||| || Sbjct 258582 AACTTGAACTTCTTTCATGAATCTTCCAGCAAGATTCTCTAAAACGATGCCGTCGGATGC 258523 Query 4964 TGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCG---TCAGGCTTAAGTTTTTT 5020 || ||||| || | ||| || |||| ||||| ||||| |||| |||| || || Sbjct 258522 GGCGAAAAATGCAAGAACGTGGGATACAAAGTGTCGTTCGCCGTCAG--TTAAATTGTT- 258466 Query 5021 CCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGC 5080 ||| || | | ||||| | ||||||||||||||| | ||||| || || ||||| || Sbjct 258465 CCAATGTTGAAGATCTTGTGATAAATCAACTTCTTCGGCGGTCCAGAATGAGGCTTCGGC 258406 Query 5081 TTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAATCTGTTGTC 5140 |||||||||||| |||||| | ||| || | ||| || | || ||| | || Sbjct 258405 TTTTTTGTACATTTCCCAAATTTTAGGGTATTCAATTGGGAACATACAAAAACGGTCTGG 258346 Query 5141 GTTAGGTGTAAGAAGCGGTTCTT 5163 ||| || | |||||| || |||| Sbjct 258345 GTTTGGAGCAAGAAGTGGCTCTT 258323 >seq104 Length=244920 Score = 129 bits (142), Expect = 5e-25 Identities = 259/379 (68%), Gaps = 14/379 (4%) Strand=Plus/Plus Query 4545 AAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTT 4604 ||||| || ||||||||||| | |||||||| | ||| || ||||| ||||| ||| Sbjct 172064 AAACAAGCGAAATCACAATGAAGTCCTTCGTCACACAAAATAAGCTCGTTTGAAAAAGTT 172123 Query 4605 AATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAG 4664 || || |||||||||| | ||||||||||||||||| || || | ||| || Sbjct 172124 AAACCATGCATTAAACCACGTTTTTTAAGCCAAAATATCGCACATAAACTACTAGAGAAA 172183 Query 4665 AATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCT 4724 || || ||||| ||| ||||| || || | || | | | | | | Sbjct 172184 AAAATACCTTCAACGCAAGCAAAAGCAACGATTCTTTCAACAATCAAATCGAC----GAA 172239 Query 4725 TTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCG 4784 | |||||||| || ||||| | ||||| || || || ||||| || | ||||| Sbjct 172240 TCGATCCATTTCAAAGCCCAATCCGCTTTCTTACGAATACAAGGAATCGTCTCAATAGCA 172299 Query 4785 TTAAATAATTTACTTTTTT----CAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCT 4840 | ||| || | | || | ||||| | ||| ||||| || || | || || || Sbjct 172300 TGAAACAAACAATTCTTCTCAACCAAATCG--CTT--ATATATGTTTCAAGAAGGAGACT 172355 Query 4841 ATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTA-AAAGCATCTAGCTT 4899 ||||||||||||||||||||| || || || || || || | ||| |||||| | |||| Sbjct 172356 ATACATTTCAGAATGTATATTCTCAATCGCGATTTGGAACCTGTAGAAAGCA-CGCGCTT 172414 Query 4900 CTGTTACTTGAACTTCGTT 4918 ||| ||||||||||| || Sbjct 172415 CTGAAACTTGAACTTCTTT 172433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427012506338291