Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq6 105 6e-18 >seq6 Length=59463898 Score = 105 bits (116), Expect = 6e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 |||||||| || || ||||| ||||||||||||||||| ||| | || ||| | Sbjct 20997063 ATGCAAATCTTCGTGAAAACATTGACCGGCAAAACCATCACCCTTGAGGTGGAGAGTTCC 20997122 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTC-GATCA 111218 ||| | | | | | || ||| || || ||||| ||||| | |||| | ||||| Sbjct 20997123 GATACCATAGACAACGTGAAAGCTAAGATCCAAGACAAGGAAGG-GATCCCACCAGATCA 20997181 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 |||||| ||||| | || || |||||||| |||||| || | || ||||| || Sbjct 20997182 ACAAAGACTTATCTTCGCCGGTAAACAATTAGAAGATGGCCGTACCCTTGCTGATTACAA 20997241 Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111328 || ||||||||||| || || ||||||||| | || || | ||||||| Sbjct 20997242 CATCCAAAAAGAATCCACCCTTCATTTAGTGCTTCGGTTGAGAGGTGGCA 20997291 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 |||||||| ||||| || || | || || || || |||||| | ||| |||| | Sbjct 20998431 ATGCAAATATTTGTGAAGACACTTACTGGGAAGACTATTACCTTAGAAGTGGAAAGCTCT 20998490 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 || | ||| | || ||| ||| ||| || || || || ||||| ||||| Sbjct 20998491 GACACAATTGATAATGTGAAAGCAAAGATTCAGGATAAGGAGGGTATTCCCCCAGATCAG 20998550 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||||||||||||| ||| ||||| || ||||| ||| | ||| |||| ||||| ||| Sbjct 20998551 CAAAGGCTTATTTTTGCTGGCAAGCAGTTGGAGGATGGTCGTACTTTGGCAGATTACAAT 20998610 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGC 111327 || || ||||||||||| || || | || | || || || |||||| Sbjct 20998611 ATTCAGAAAGAATCTACCCTGCACCTTGTTCTTCGCCTCCGTGGTGGC 20998658 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 111193 GACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAA 111252 ||||| |||||| | || || ||||| ||||| || | |||||||||||| | ||| Sbjct 17145752 GACAAGGAAGGCATCCCACCAGACCAACAGAGGCTCATCTTTGCGGGCAAACAGCTTGAA 17145811 Query 111253 GATTCTAAAACTATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTAGTGTTG 111312 ||| |||| |||| ||||| || || ||||| || || ||||| ||||| ||| | Sbjct 17145812 GATGGCCGAACTTTGGCAGATTACAACATCCAAAAGGAGTCCACACTTCATTTGGTGCTC 17145871 Query 111313 CGTCTGCGCGGTGG 111326 ||||| || ||||| Sbjct 17145872 CGTCTCCGTGGTGG 17145885 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||||||||||||||| || | ||||| || || || || |||| ||| Sbjct 20998203 ATGCAAATTTTTGTCAAGACCCTTACCGGAAAGACAATAACTTTGGAGGTTGAAAGTTCT 20998262 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | | | | || || |||||| |||||||| || |||| ||||| Sbjct 20998263 GATACAATAGATAATGTGAAGGCGAAAATTCAGGACAAAGAGGGTATTCCTCCAGATCAG 20998322 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || ||||| |||| ||| ||||| || ||||| ||| ||| |||| ||||||||| Sbjct 20998323 CAGAGGCTAATTTTTGCCGGCAAGCAGTTGGAGGATGGACGTACTCTGGCTGATTATAAT 20998382 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111328 || || || |||||||| | || || || ||| | || || ||||||| Sbjct 20998383 ATCCAGAAGGAATCTACTTTGCACTTGGTTTTGAGGCTTCGTGGTGGCA 20998431 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 |||||||||||||| || || ||||| || || ||||||||| | || ||| | Sbjct 20997519 ATGCAAATTTTTGTTAAGACTTTGACAGGGAAGACCATTACCCTCGAGGTTGAATCTTCT 20997578 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | ||| | || ||| || || |||||||| || | || ||||| Sbjct 20997579 GATACGATTGATAATGTCAAAGCCAAGATCCAGGACAAAGAGGGTATCCCTCCTGATCAG 20997638 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || |||||||| | || || || |||||||||||| | || | || ||||| ||| Sbjct 20997639 CAGAGGCTTATCTTCGCCGGTAAGCAATTGGAAGATGGTCGCACCCTAGCTGATTACAAT 20997698 Query 111280 ATACAAAAAGAATCTACACTACATTTAGT 111308 || ||||| ||||| || || ||||| || Sbjct 20997699 ATCCAAAAGGAATCCACCCTTCATTTGGT 20997727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421774561347352