Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq55 197 1e-45 seq104 127 2e-24 seq7 84.2 2e-11 >seq55 Length=606834 Score = 197 bits (218), Expect = 1e-45 Identities = 555/843 (66%), Gaps = 27/843 (3%) Strand=Plus/Minus Query 23199 ACTATTCATAACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTT 23258 ||||||||||||| ||| |||||||||||||| || | || ||||| || ||||| Sbjct 250562 ACTATTCATAACAGAAGCTTTCTGATATTCCCCAACGCGCTTCTCAAAAAAGTTAGTCTT 250503 Query 23259 ACCCTCTAATGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTT 23318 || | | || || ||||| ||||||| ||||| | |||||| || ||| Sbjct 250502 CCCTTGAAGAGAAATCAACTCCATCCAATCAAAAGGATTCTGAACATTATAAAC---TTT 250446 Query 23319 ---ACATGATAATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAA 23375 ||| | || || | |||||| || || || |||||||| || | |||||| Sbjct 250445 CCCACAACCAAGCTCACCCAACAACCTATCGGCAACGAACTCAATATACTGGCTCATCAA 250386 Query 23376 ATCATAGTTTATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAAT 23435 |||| || || || | | |||| ||| ||| | | || | ||||| Sbjct 250385 ATCACCATTCATCCCGACCAACGCGCACGGAAGCGCGTCACAAACAAACTCCCTCTCAAT 250326 Query 23436 GGAAACAGCATCTTTAATTAT-TTGAACAATAACTTCTTCACTAGGTGGATATTTTAAAT 23494 ||| ||||| | | || || || | || || |||| || || | | ||| Sbjct 250325 CTCAACCGCATCACTCACAATCTTCTTCACTCGCTCCT-CACTCAGTTTAT-TCCTCAAT 250268 Query 23495 ACTTAAACAAT-AAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCA 23553 | | || || ||||| |||||||||||||| || ||||| || | ||| | || Sbjct 250267 AGTGAATAAAGCAAACAAGCAAAATCACAATGAAGTCCTTCGTCACGCGAAATAAGCTCG 250208 Query 23554 TTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAAT 23613 || ||||| ||||| || |||||||| || |||||||||| |||||| |||||| || Sbjct 250207 TTTGAAAAAGTTAAACCAGGCATTAAACCACGTTTTTTAAGCCAAAAAATTGCACAGAAA 250148 Query 23614 GATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTT 23673 || || || |||||||| ||||| ||||| || || | | | | |||| | Sbjct 250147 CTACCAGAGAAAAAAATACCTTCAACGCAAGCAAAAGCAACGATTCTTTCAGCAAACGAA 250088 Query 23674 GCATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTAC----ACACTC 23729 | |||| |||||||| | ||||| || ||| |||| ||| Sbjct 250087 TCCGACGAATCG---ATCCATTTCAAAGCCCAATCCGCTTTC----TTACGAATACAAGG 250035 Query 23730 AATTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATC 23789 ||| || ||||| || | || | | | | || || | ||| ||||||| || || Sbjct 250034 AATCGTCTCAATAGCATGAAACAAACGATTCTTCTCAACCGAATCGCTTATATACGTTTC 249975 Query 23790 AATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAA 23849 || || | |||||||||||||||||| ||||| ||||| || || ||||| || ||||| Sbjct 249974 AAGAAGGAGACTATACATTTCAGAATGTATATTCTCAATCGCGATTTGAAAACCGTAAAA 249915 Query 23850 ACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAAC 23909 | | || || || | |||||| || || | |||||| ||| | ||| || ||| Sbjct 249914 AGCACGCGCCTCTGAAACTTGAACTTCTTTCATGAATCTTCCAGCAAGATTCTCTAAAAC 249855 Query 23910 AATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCA---TC 23966 || || || || || || || |||||||| | || ||| |||| ||| || Sbjct 249854 GATGCCGTCGGATGCGGCGAAAAATGCAAGAACGTGGGATACAAAGTGTCGTTCGCCGTC 249795 Query 23967 AGTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCA 24026 |||| || || ||||||| | || ||||| ||||||||||||||| || | ||||| Sbjct 249794 AGTT---AAATTGTTCCAATGTTGAAGATCTTGTGATAAATCAACTTCTTCGGCGGTCCA 249738 Query 24027 AAA 24029 || Sbjct 249737 GAA 249735 Score = 197 bits (218), Expect = 1e-45 Identities = 555/843 (66%), Gaps = 27/843 (3%) Strand=Plus/Minus Query 23199 ACTATTCATAACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTT 23258 ||||||||||||| ||| |||||||||||||| || | || ||||| || ||||| Sbjct 259245 ACTATTCATAACAGAAGCTTTCTGATATTCCCCAACGCGCTTCTCAAAAAAGTTAGTCTT 259186 Query 23259 ACCCTCTAATGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTT 23318 || | | || || ||||| ||||||| ||||| | |||||| || ||| Sbjct 259185 CCCTTGAAGAGAAATCAACTCCATCCAATCAAAAGGATTCTGAACATTATAAAC---TTT 259129 Query 23319 ---ACATGATAATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAA 23375 ||| | || || | |||||| || || || |||||||| || | |||||| Sbjct 259128 CCCACAACCAAGCTCACCCAACAACCTATCGGCAACGAACTCAATATACTGGCTCATCAA 259069 Query 23376 ATCATAGTTTATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAAT 23435 |||| || || || | | |||| ||| ||| | | || | ||||| Sbjct 259068 ATCACCATTCATCCCGACCAACGCGCACGGAAGCGCGTCACAAACAAACTCCCTCTCAAT 259009 Query 23436 GGAAACAGCATCTTTAATTAT-TTGAACAATAACTTCTTCACTAGGTGGATATTTTAAAT 23494 ||| ||||| | | || || || | || || |||| || || | | ||| Sbjct 259008 CTCAACCGCATCACTCACAATCTTCTTCACTCGCTCCT-CACTCAGTTTAT-TCCTCAAT 258951 Query 23495 ACTTAAACAAT-AAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCA 23553 | | || || ||||| |||||||||||||| || ||||| || | ||| | || Sbjct 258950 AGTGAATAAAGCAAACAAGCAAAATCACAATGAAGTCCTTCGTCACGCGAAATAAGCTCG 258891 Query 23554 TTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAAT 23613 || ||||| ||||| || |||||||| || |||||||||| |||||| |||||| || Sbjct 258890 TTTGAAAAAGTTAAACCAGGCATTAAACCACGTTTTTTAAGCCAAAAAATTGCACAGAAA 258831 Query 23614 GATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTT 23673 || || || |||||||| ||||| ||||| || || | | | | |||| | Sbjct 258830 CTACCAGAGAAAAAAATACCTTCAACGCAAGCAAAAGCAACGATTCTTTCAGCAAACGAA 258771 Query 23674 GCATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTAC----ACACTC 23729 | |||| |||||||| | ||||| || ||| |||| ||| Sbjct 258770 TCCGACGAATCG---ATCCATTTCAAAGCCCAATCCGCTTTC----TTACGAATACAAGG 258718 Query 23730 AATTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATC 23789 ||| || ||||| || | || | | | | || || | ||| ||||||| || || Sbjct 258717 AATCGTCTCAATAGCATGAAACAAACGATTCTTCTCAACCGAATCGCTTATATACGTTTC 258658 Query 23790 AATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAA 23849 || || | |||||||||||||||||| ||||| ||||| || || ||||| || ||||| Sbjct 258657 AAGAAGGAGACTATACATTTCAGAATGTATATTCTCAATCGCGATTTGAAAACCGTAAAA 258598 Query 23850 ACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAAC 23909 | | || || || | |||||| || || | |||||| ||| | ||| || ||| Sbjct 258597 AGCACGCGCCTCTGAAACTTGAACTTCTTTCATGAATCTTCCAGCAAGATTCTCTAAAAC 258538 Query 23910 AATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCA---TC 23966 || || || || || || || |||||||| | || ||| |||| ||| || Sbjct 258537 GATGCCGTCGGATGCGGCGAAAAATGCAAGAACGTGGGATACAAAGTGTCGTTCGCCGTC 258478 Query 23967 AGTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCA 24026 |||| || || ||||||| | || ||||| ||||||||||||||| || | ||||| Sbjct 258477 AGTT---AAATTGTTCCAATGTTGAAGATCTTGTGATAAATCAACTTCTTCGGCGGTCCA 258421 Query 24027 AAA 24029 || Sbjct 258420 GAA 258418 >seq104 Length=244920 Score = 127 bits (140), Expect = 2e-24 Identities = 310/467 (66%), Gaps = 22/467 (5%) Strand=Plus/Plus Query 23506 AAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTT 23565 ||||| || ||||||||||| || ||||| || | ||| | || || ||||| ||| Sbjct 172064 AAACAAGCGAAATCACAATGAAGTCCTTCGTCACACAAAATAAGCTCGTTTGAAAAAGTT 172123 Query 23566 AATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAG 23625 || || ||||||| || |||||||||| ||||||||| ||| || | || || Sbjct 172124 AAACCATGCATTAAACCACGTTTTTTAAGCCAAAATATCGCACATAAACTACTAGAGAAA 172183 Query 23626 AAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCA 23685 |||||||| ||||| ||||| || || | | | | ||| || |||| Sbjct 172184 AAAATACCTTCAACGCAAGCAAAAGCAACGATTCTTTCAACAAT-----CA----AATCG 172234 Query 23686 --GAA---ATCCAtttttttGTCCAATTAGCCTTCAATTTTAC----ACACTCAATTGTT 23736 ||| |||||||| | ||||| || ||| |||| ||| ||| || Sbjct 172235 ACGAATCGATCCATTTCAAAGCCCAATCCGCTTTC----TTACGAATACAAGGAATCGTC 172290 Query 23737 TCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGT 23796 ||||| || | || | | || | || || | ||| |||||||||| |||| || Sbjct 172291 TCAATAGCATGAAACAAACAATTCTTCTCAACCAAATCGCTTATATATGTTTCAAGAAGG 172350 Query 23797 AAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTA 23856 | |||||||||||||||||| ||||| ||||| || || || |||| || ||| | Sbjct 172351 AGACTATACATTTCAGAATGTATATTCTCAATCGCGATTTGGAACCTGTAGAAAGCACGC 172410 Query 23857 GCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCA 23916 ||||| || | |||||| || || | |||||| ||| ||| || ||| || | Sbjct 172411 GCTTCTGAAACTTGAACTTCTTTCATGAATCTTCCAGCATGATTCTCTAAAACGATGTCG 172470 Query 23917 TCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTC 23963 | ||| || ||||| |||||||| | || ||| |||| ||| Sbjct 172471 TTGGAAGCGGCGAAGAATGCAAGAACGTGCGATACAAAGTGTCGTTC 172517 >seq7 Length=48961560 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 23509 CATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAAT 23568 || ||||||||||| || || |||||||| ||| || | ||||| || ||||| || Sbjct 5781756 CAAGCAAAATCACAGTGAAGACCTTCATCTCTAGAGATGAGCTCATTTGAGAATGTCAAA 5781697 Query 23569 CCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCA 23607 |||||||| ||||||| ||||||| ||| ||||| ||| Sbjct 5781696 CCTGGCATCAATCCTCTCTTTTTAAGCCAGAATATGGCA 5781658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521441541937800