Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Citrullus_20lanatus_20[genbank_20GCA_5F000238415.1_202011-12-13]
40,248 sequences; 321,046,825 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq21318 172 1e-37
seq29839 165 2e-35
seq18711 149 1e-30
seq3045 143 6e-29
seq8166 136 9e-27
seq22339 122 2e-22
seq14089 86.0 1e-11
>seq21318
Length=12341
Score = 172 bits (190), Expect = 1e-37
Identities = 176/230 (77%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| ||||| | |||| ||| || | ||| | |||||||| ||||| ||||| ||||||
Sbjct 4971 ATACCCCCACGAAGCCGAAGAACCAAATGCAGGGTAGATTCCTTCTGGATATTGTAGTCA 5030
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| ||||||| |||||| || || || || ||||||||||| || |||||||||||||||
Sbjct 5031 GCAAGAGTTCGACCGTCCTCAAGCTGCTTACCAGCAAAAATCAGTCTCTGTTGATCAGGA 5090
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || || || || || || || || || || ||||| || | ||||| | |||
Sbjct 5091 GGGATACCCTCCTTGTCTTGGATTTTAGCCTTGACATTGTCAATTGTATCAGAACTTTCC 5150
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| || ||||| || || |||||||| || || |||||||| |||||
Sbjct 5151 ACCTCAAGAGTAATGGTTTTGCCAGTAAGGGTCTTCACAAATATTTGCAT 5200
Score = 156 bits (172), Expect = 1e-32
Identities = 168/221 (76%), Gaps = 6/221 (3%)
Strand=Plus/Plus
Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401
|| ||||| |||| ||| | ||||||||| ||||| ||||| || || | || ||||
Sbjct 5211 AGTCTAAGCACTAAATGGAGTGTAGATTCCTTCTGGATATTGTAATCGGCAAGCGTTCGG 5270
Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461
|| || || ||||| || |||||||| || ||||||||||| || || || || || |||
Sbjct 5271 CCATCCTCAAGTTGCTTACCAGCAAAGATAAGCCTCTGTTGGTCGGGTGGAATGCCCTCT 5330
Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGT 104518
||||| ||||||||||| |||||||| || | || || ||| ||| ||||| ||
Sbjct 5331 TTATCTTGAATCTTTGCCTTTACATTGTCAATTGTGTCTGAGCT---TTCCACCTCGAGG 5387
Query 104519 GTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || || || |||||||| ||||||| || || |||||
Sbjct 5388 GTGATTGTTTTGCCAGTAAGGGTTTTTATGAAGATTTGCAT 5428
Score = 145 bits (160), Expect = 2e-29
Identities = 160/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407
|| || || || ||||| ||||| ||||| || || ||||| | || ||| |||||||||
Sbjct 4533 AGCACAAGGTGCAATGTTGATTCCTTCTGGATGTTGTAGTCTGCTAAAGTCCTACCGTCT 4592
Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467
|| ||||| || |||||||| || | |||||||| ||||| || || || ||||| ||
Sbjct 4593 TCCAGTTGCTTACCAGCAAATATCAATCTCTGTTGGTCAGGTGGGATACCCTCTTTGTCT 4652
Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527
|| ||||| ||||| ||||| || | ||| || | ||| || || | ||| || |||
Sbjct 4653 TGGATCTTGGCTTTCACATTGTCAATGGTGTCTGAACTTTCGACTTCCAATGTGATTGTC 4712
Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
|| || || | ||| || || || |||||||||
Sbjct 4713 TTCCCCGTTAATGTCTTCACGAAAATCTGCATT 4745
Score = 141 bits (156), Expect = 2e-28
Identities = 170/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| ||||| | || | ||| || | ||| | || ||||| || || || || || |||
Sbjct 4287 ATCCCCCCACGCAGTCGAAGCACCAAATGGAGAGTTGATTCCTTTTGGATGTTGTAATCA 4346
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| || |||||| || ||||| |||||||| || ||||| || |||||||| || |||||
Sbjct 4347 GCTAAAGTTCTGCCATCTTCAAGTTGTTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGT 4406
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| ||||| || || || ||||||||||| || ||||| || | || ||| ||||
Sbjct 4407 GGGATTCCCTCCTTGTCTTGAATCTTTGCCTTCACATTGTCGATAGTGTCGGAGCTTTCT 4466
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
|| || || || || ||||| || || | ||| || || || |||||||||
Sbjct 4467 ACTTCCAGAGTGATGGTCTTGCCCGTCAATGTCTTCACGAAAATCTGCATT 4517
Score = 140 bits (154), Expect = 7e-28
Identities = 161/214 (75%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || | ||| || || ||||| || ||||| ||||| || | |||||| || |||||
Sbjct 4760 AAGCACCAAATGCAACGTCGATTCCTTTTGAATGTTATAATCTGCTAGAGTCCTGCCGTC 4819
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
||| || || || ||||||||||| | ||||||||| ||||| || || || || |||||
Sbjct 4820 TTCAAGCTGCTTACCAGCAAAAATCAACCTCTGTTGGTCAGGTGGAATGCCCTCCTTATC 4879
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525
|| ||||| ||||| ||||| || | ||||| || | || || || | || || |
Sbjct 4880 TTGGATCTTAGCTTTCACATTATCAATTGTATC-TGAGCTCTCCACTTCCAAGGTGATTG 4938
Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
| || ||||| | ||||| ||||| ||||||||
Sbjct 4939 TTTTGCCAGTCAAGGTTTTCACAAAAATCTGCAT 4972
Score = 127 bits (140), Expect = 5e-24
Identities = 149/200 (75%), Gaps = 6/200 (3%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || |||||||||||||| ||||||| | ||| | ||| || || | ||||||||||
Sbjct 4092 GTGGACTCTTTCTGAATATTGTAGTCAGCCAAAGTCCGACCATCCTCCAATTGTTTTCCA 4151
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || || ||||||||||| || || || || || || || |||||||| || ||
Sbjct 4152 GCAAAGATCAGTCTCTGTTGATCTGGTGGAATCCCCTCCTTGTCTTGAATCTTCGCCTTC 4211
Query 104483 ACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539
||||| || | || || ||| ||| || || | ||| || ||||| || || ||
Sbjct 4212 ACATTGTCGATTGTGTCTGAGCT---TTCAACTTCCAATGTGATTGTCTTTCCTGTCAGC 4268
Query 104540 GTTTTTACAAATATCTGCAT 104559
|| || || || ||||||||
Sbjct 4269 GTCTTCACGAAAATCTGCAT 4288
>seq29839
Length=13537
Score = 165 bits (182), Expect = 2e-35
Identities = 575/891 (65%), Gaps = 11/891 (1%)
Strand=Plus/Plus
Query 268691 AACCCAGATAGATTTGTGATATTTCCAATACAGCATGGTGATATATGGAGGATGTACAAA 268750
||||| ||| | || || || ||||| || || | | || ||| |||||||||
Sbjct 4261 AACCCCGATCGCTTCTGCATGTTCCCAATTCATTATCCTCAAATCTGGGAGATGTACAAG 4320
Query 268751 CAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTAATAGAT 268810
| |||| || || || ||||||| || ||||| ||||| || | ||| | |
Sbjct 4321 AAAGCCGAAGCCTCCTTCTGGACTGCCGAGGAAGTCGATCTCTCACAAGACCTTCGCCAC 4380
Query 268811 TGGAAAAATTTAAAACCAGAAGAAAGAAGATTT-ATATCTTATATTCTTGCGTTTTTTGC 268869
||| || |||| | || || | || |||| || || || | ||||| || || ||
Sbjct 4381 TGGGAATCCTTAACTTCTGACGAGA-AACATTTCATCACTCATGTCCTTGCCTTCTTCGC 4439
Query 268870 AGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGAT 268929
| | |||||| |||||| || ||||| | | |||| |||| || || |
Sbjct 4440 TGCTTCTGATGGCATCGTTTTGGAGAATCTCGCCGGACGGTTCATGAAAGAAGTCCAAGT 4499
Query 268930 TCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGAT 268989
| ||||||| ||| ||| || |||||||| || || || || || || ||||| |||||
Sbjct 4500 TGCTGAAGCTAGAGCTTTCTATGGATTCCAAATTGCCATCGAGAACATCCATTCCGAGAT 4559
Query 268990 GTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTATTTTC 269049
||||||||| | | || || ||||| | || ||||| ||||| | | ||
Sbjct 4560 GTACAGTCTTCTCCTTGAAACCTATATCAAAAATTCAAACGAGAAGAATCGGTTGTTCCG 4619
Query 269050 TTCTATGAGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATAAA 269109
| |||| |||| | |||||| | || || |||| ||||| | || |||||
Sbjct 4620 TGCTATTGAAACTGTCCCCTGTGTCAAGAAGAAGGCTGATTGGGCGTTAAAGTGGAT--- 4676
Query 269110 CGATAGCGCG---CCTTACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATT 269166
|||||| || | | || || | | | || |||||| ||| || || || ||
Sbjct 4677 TGATAGCACGGAATCGTTCGCCGAGCGTATTTTGGCGTTTGCCTGTGTTGAGGGAATTTT 4736
Query 269167 CTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATT 269226
||| || || ||| | | || || |||||||| ||| | || | ||||| |||||
Sbjct 4737 CTTCTCAGGTAGTTTCTGCTCCATTTTCTGGTTGAAAAAACGTGGGTTAATGCCTGGATT 4796
Query 269227 AACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGTTT 269286
||| ||||| ||||| ||||| | || ||||| | || || || || ||||||||
Sbjct 4797 AACGTTCTCAAACGAGTTGATTTCACGAGATGAAGGGCTTCATTGTGATTTTGCTTGTTT 4856
Query 269287 ATTATTTACTAATTATCTTTCACACAAACCTTCTCAAGATAGAGTATACGAAATTATAGA 269346
| | || | ||| | | | ||| | | ||| |||| || ||| ||
Sbjct 4857 GT--TGTATTCATTGT-TGAGGAAGAAATTGAGTGAGGATCGAGTGAGGGAGATTGTAAC 4913
Query 269347 TTCAGCTGTTTCTGTAGAAACAGAATTTCTAACGGAAGCTCTATCTATCGATCTTATCGG 269406
|| ||| | |||||| |||||| | || ||| | | | | |||| | ||
Sbjct 4914 AGAGGCCGTTGATATAGAAAGGGAATTTGTGTGTGATGCTTTGCCGGTGGCTCTTGTTGG 4973
Query 269407 TATGAATAGCAAATCGATGATAGAATATATTAAGTTCGTATCTGATAGATTGCTGGTGTC 269466
|||||| | | | ||||| |||| || | || || | ||||| ||| | | |
Sbjct 4974 AATGAATGGGGACTTGATGAGCCAATACATAGAATTTGTGGCAGATAGGTTGGTTGGAGC 5033
Query 269467 TTTAGGGTTTAGTAAAAAATATAACGTTGAAAATCCGTTTAGTTTTATGGAGAATATATC 269526
|| || | | | |||| ||||| ||| ||||||||||| || |||||| || ||
Sbjct 5034 CTTGGGATATGGCAAAATCTATAATGTTCAAAATCCGTTTGATTGGATGGAGTTGATTTC 5093
Query 269527 ATTAGAAGGTAAGGCTAATTTCTTCGAGAAGCGGGTAAGTAACTATCAGAA 269577
|| | || ||| |||||||||| ||||| | || || | ||||||||
Sbjct 5094 GTTGCAGGGGAAGACTAATTTCTTTGAGAAAAGAGTCGGTGAATATCAGAA 5144
>seq18711
Length=80062
Score = 149 bits (164), Expect = 1e-30
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| || | || | || || | ||||| || |||||||| || || ||||| ||
Sbjct 40151 ATTCCACCGCGTAAACGGAGCACCAAATGTAGGGTTGATTCTTTTTGTATGTTATAATCG 40092
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| || |||| ||| || || || || |||||||| ||||| |||||||| || || |||
Sbjct 40091 GCGAGGGTTCGACCATCCTCGAGCTGCTTTCCAGCGAAAATAAGCCTCTGCTGGTCTGGA 40032
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| |||||||||||||||||||| || || |||||||| || | ||||| | |||
Sbjct 40031 GGAATTCCTTCTTTATCCTGAATTTTGGCCTTTACATTGTCAATAGTATCAGAACTTTCA 39972
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| || || || || || || || || ||||| || || || |||||
Sbjct 39971 ACCTCAAGGGTTATTGTTTTGCCGGTGAGAGTTTTCACGAAGATTTGCAT 39922
Score = 134 bits (148), Expect = 3e-26
Identities = 171/234 (73%), Gaps = 6/234 (3%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| || | || | || || || || | || || || || |||||||| |||||
Sbjct 40607 ATTCCACCACGAAGACGCAGCACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCG 40548
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| ||| || | || ||||| || || || || || || || | ||| || || || ||
Sbjct 40547 GCTAGTGTCCGTCCATCTTCGAGCTGCTTGCCTGCGAAGATCAACCTTTGCTGGTCCGGG 40488
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGT 104506
|| || |||||||| || |||||||| ||||| ||||| || | || || ||| |
Sbjct 40487 GGAATACCTTCTTTGTCTTGAATCTTAGCTTTGACATTGTCGATTGTGTCTGAGCT---T 40431
Query 104507 TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
|| |||||||||||||||||||| || ||||| ||||| ||||| || ||||||
Sbjct 40430 TCAACCTCTAGTGTAATAGTCTTCCCCGTAAGCGTTTTGACAAAAATTTGCATT 40377
Score = 127 bits (140), Expect = 5e-24
Identities = 147/198 (74%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| ||||| || |||||||||||||| | |||||| || || || || | ||| || |||
Sbjct 40802 GTCGATTCCTTTTGAATATTATAGTCGGCTAGAGTCCTGCCATCCTCCAATTGCTTCCCA 40743
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| ||||||| ||||||||| || || || || ||||||||||| || ||||| |||||
Sbjct 40742 GCGAAAATTAACCTCTGTTGGTCTGGTGGGATCCCTTCTTTATCTTGTATCTTAGCTTTA 40683
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | ||||| | || || || | ||||| || || || || | ||
Sbjct 40682 ACGTTGTCGATAGTATCTGAACTCTCAACTTCCAAAGTAATTGTTTTTCCGGTTAAGGTC 40623
Query 104543 TTTACAAATATCTGCATT 104560
|| ||||| || ||||||
Sbjct 40622 TTCACAAAAATTTGCATT 40605
>seq3045
Length=115554
Score = 143 bits (158), Expect = 6e-29
Identities = 160/214 (75%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || || || | ||||| || |||||||| || || |||| || || || || ||
Sbjct 10826 AAGGACAAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCAGCAAGGGTCCTTCCATC 10885
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
||||||||| ||||||||||| || | |||||| || || ||||| ||||| || || ||
Sbjct 10886 TTCTAGTTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCCGGAGGAATTCCCTCCTTGTC 10945
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526
|||||| ||||| || ||||| || | ||||| | || ||||| | || || ||
Sbjct 10946 CTGAATTTTTGCCTTCACATTGTCGATTGTATCAGAACTCTCCACCTCCAAAGTGATGGT 11005
Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
||| || || || || || ||||| |||||||||
Sbjct 11006 CTTCCCCGTCAGGGTCTTAACAAAGATCTGCATT 11039
Score = 136 bits (150), Expect = 9e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| || || || | ||| || || || | || || || |||||||| || ||||||
Sbjct 11037 ATTCCTCCCCTCAGACGAAGGACAAGGTGAAGAGTTGACTCCTTCTGAATGTTGTAGTCA 11096
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| ||||| || || || || || || ||||| ||||| || | |||||| || || ||
Sbjct 11097 GCAAGAGTCCTTCCATCCTCAAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGG 11156
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| ||||||||||| || || || ||||| || | ||||||| | ||
Sbjct 11157 GGGATGCCTTCCTTATCCTGAATTTTCGCCTTAACATTGTCGATGGTATCGGAACTCTCG 11216
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| || || || || || ||||| | || || || || ||||||||
Sbjct 11217 ACCTCAAGGGTGATGGTTTTTCCAGTCAAAGTCTTAACGAAGATCTGCAT 11266
Score = 114 bits (126), Expect = 3e-20
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401
||||| || || || || | || ||||||||||| || || ||||| | |||||||
Sbjct 11961 AGCCTTAGGACGAGGTGAAGAGTTGATTCTTTCTGGATGTTGTAGTCGGCAAGAGTTCGG 12020
Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461
|| || || ||||| || || || || || | | || ||||| || || ||||||||
Sbjct 12021 CCATCCTCAAGTTGCTTGCCGGCGAAGATCAAACGTTGCTGATCCGGGGGGATTCCTTCC 12080
Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521
|||||||| ||||| || || || || || | ||| || | || ||||| || ||
Sbjct 12081 TTATCCTGGATCTTGGCCTTAACGTTGTCGATGGTGTCAGAGGACTCCACCTCGAGGGTG 12140
Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| ||||| || || || ||||| || || || |||||
Sbjct 12141 ATGGTCTTGCCTGTGAGGGTTTTAACGAAGATTTGCAT 12178
>seq8166
Length=147256
Score = 136 bits (150), Expect = 9e-27
Identities = 164/223 (74%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401
||||| | || ||||| | || || || ||||| || || ||||| | || |||| |
Sbjct 120230 AGCCTTAAGACAAGATGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGTGTTCGA 120289
Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461
|| || || || || || || || ||||| || | ||| || || || |||||||| ||
Sbjct 120290 CCATCCTCCAGCTGCTTACCGGCGAAAATGAGACGCTGCTGGTCCGGCGGTATTCCCTCC 120349
Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521
|| |||||||||||||| || ||||| || | |||||| | || ||||| || ||
Sbjct 120350 TTGTCCTGAATCTTTGCCTTAACATTATCGATGGTATCAGAACTCTCGACCTCGAGAGTT 120409
Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTGT 104564
|| ||||| || ||||| ||||| || || |||||||| ||||
Sbjct 120410 ATGGTCTTCCCGGTAAGCGTTTTCACGAAGATCTGCATATTGT 120452
>seq22339
Length=139203
Score = 122 bits (134), Expect = 2e-22
Identities = 145/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||| || || || |||| || || | ||||||||||| ||| || ||
Sbjct 90340 GTCGACTCCTTCTGGATGTTGTAATCAGCAAGGGTACGACCGTCTTCTAATTGCTTCCCG 90399
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || || || ||||| || || || |||||||| || ||||| |||||||| ||
Sbjct 90400 GCGAAGATGAGTCTTTGTTGGTCTGGGGGAATTCCTTCCTTGTCCTGGATCTTTGCCTTG 90459
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | |||||| | ||| ||||| || || || || ||||| || || ||
Sbjct 90460 ACGTTATCGATGGTATCAGAGGATTCAACCTCGAGGGTGATGGTTTTACCGGTCAGGGTC 90519
Query 104543 TTTACAAATATCTGCAT 104559
|| || || ||||||||
Sbjct 90520 TTAACGAAAATCTGCAT 90536
Score = 111 bits (122), Expect = 4e-19
Identities = 145/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || |||||||| || || |||| ||||| || || || || || || || ||
Sbjct 89884 GTGGACTCCTTCTGAATGTTGTAATCAGCGAGAGTCCTTCCATCCTCCAGCTGCTTCCCT 89943
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || |||||||| || || ||||| || ||||| || |||||||| || ||||||
Sbjct 89944 GCGAAGATCAGCCTCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGAATTTTAGCTTTT 90003
Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
||||| || | || || || | || ||||| | || || ||||| || || | ||
Sbjct 90004 ACATTATCGATCGTGTC-AGAGCTCTCCACCTCCAAGGTGATGGTCTTTCCGGTCAAGGT 90062
Query 104542 TTTTACAAATATCTGCAT 104559
||| || || ||||||||
Sbjct 90063 TTTCACGAAGATCTGCAT 90080
Score = 98.7 bits (108), Expect = 2e-15
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
||||| || || || || || ||||| | | || | || || || ||||| |||||
Sbjct 90568 GTAGACTCCTTTTGGATGTTGTAGTCGGCCAACGTACGGCCATCCTCGAGTTGCTTTCCG 90627
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || || | || ||||| || || ||||||||||| ||||| ||||| || |||
Sbjct 90628 GCGAAGATGAGACGTTGCTGATCTGGGGGAATTCCTTCTTTGTCCTGGATCTTGGCCTTT 90687
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | |||||| | || ||||| || || || ||||| || || || ||
Sbjct 90688 ACGTTGTCGATGGTATCAGATGACTCGACCTCAAGGGTGATGGTCTTGCCGGTCAGGGTC 90747
Query 104543 TTTACAAATATCTGCAT 104559
|| || || || |||||
Sbjct 90748 TTGACGAAAATTTGCAT 90764
>seq14089
Length=105206
Score = 86.0 bits (94), Expect = 1e-11
Identities = 85/110 (77%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| ||||| || || || ||||| || | || |||| ||| ||||| | ||| || |||
Sbjct 70587 GTTGATTCCTTTTGGATGTTATAATCGGCAAGCGTTCGACCATCTTCCAATTGCTTACCA 70646
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAAT 104472
|||||||||| ||||| || |||||||| || ||||| || ||||| ||
Sbjct 70647 GCAAAAATTAATCTCTGCTGGTCAGGAGGAATACCTTCCTTGTCCTGCAT 70696
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1150804649751584
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |