Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrullus_20lanatus_20[genbank_20GCA_5F000238415.1_202011-12-13] 40,248 sequences; 321,046,825 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq29839 111 2e-19 >seq29839 Length=13537 Score = 111 bits (122), Expect = 2e-19 Identities = 284/428 (66%), Gaps = 12/428 (3%) Strand=Plus/Minus Query 21185 TTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGAT 21244 || ||||| |||| |||||||| || || ||||| ||||| || | ||| || || | Sbjct 5144 TTCTGATATTCACCGACTCTTTTCTCAAAGAAATTAGTCTTCCCCTGCAACGAAATCAAC 5085 Query 21245 TCCATAAAATCAAATGGATTTTCAGATTTAAATATTTTATTACAACCCAGTTCTGATAAT 21304 ||||| ||||||| ||||||| | ||| | ||||| | | |||| || | Sbjct 5084 TCCATCCAATCAAACGGATTTTGAACATTATAGATTTTGCCATATCCCAAGGCTCCAACC 5025 Query 21305 AATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCAAT 21364 || |||||||| ||||||||||| ||||| | ||| || || | |||||| || | | Sbjct 5024 AACCTATCTGCCACAAATTCTATGTATTGGCTCATCAAGTCCCCATTCATTCCAACAAGA 4965 Query 21365 TTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTC---AACAATT 21421 || || | ||| | || ||| |||||||| ||||| || ||||| Sbjct 4964 GCCACCGGCAAAGCATCACACACAAATTCCCTTTCTATATCAACGGCCTCTGTTACAATC 4905 Query 21422 ATATTTATT--ATCCTAGATGTACTAGGGGGATACAATAATTGTTTAAACATCAAACATG 21479 | | | ||||| ||| | | || | | ||| |||||| | Sbjct 4904 TCCCTCACTCGATCCT-----CACTCAATTTCTTCCTCAACAATGAATACAACAAACAAG 4850 Query 21480 CAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGG 21539 ||||||||||||| | |||||||| | || || || || || || ||||| || | Sbjct 4849 CAAAATCACAATGAAGCCCTTCATCTCGTGAAATCAACTCGTTTGAGAACGTTAATCCAG 4790 Query 21540 GCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCT-CCTGAAAAGAAAATG 21598 ||||||| || | ||||| ||||| || || || ||| | || ||||| |||||||| Sbjct 4789 GCATTAACCCACGTTTTTTCAACCAGAAAATGGA-GCAGAAACTACCTGAGAAGAAAATT 4731 Query 21599 CCCTCAAC 21606 |||||||| Sbjct 4730 CCCTCAAC 4723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531633200707520