Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrullus_20lanatus_20[genbank_20GCA_5F000238415.1_202011-12-13] 40,248 sequences; 321,046,825 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq3045 104 2e-17 seq18711 95.1 1e-14 >seq3045 Length=115554 Score = 104 bits (114), Expect = 2e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||||||||| ||||| ||||| ||||| ||||| ||| | || ||||| Sbjct 11494 ATGCAAATTTTTGTGAAAACTCTCACCGGAAAGACCATCACCTTGGAGGTTGAGTCTTCA 11435 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| || ||||| || || || ||| || || ||||| | ||| || || Sbjct 11434 GACACAATT-GACAACGTGAAGGCCAAGATTCAAGACAAGGAAGGTATTCCCCCAGACCA 11376 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 || ||||| || | ||| || |||||||| ||||||| | ||| | || ||||| || Sbjct 11375 ACAGAGACTCATCTTTGCTGGGAAACAATTGGAAGATGGCCGAACTCTTGCAGATTACAA 11316 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 ||| || || ||||||||| | ||| | || ||| Sbjct 11315 CATCCAGAAGGAGTCTACTCTCCATCTTGTCTTG 11282 >seq18711 Length=80062 Score = 95.1 bits (104), Expect = 1e-14 Identities = 163/232 (70%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGA--GTCCA 115343 |||||||| || || ||||| ||||| || ||||| || ||| | || || || | Sbjct 39922 ATGCAAATCTTCGTGAAAACTCTCACCGGCAAAACAATAACCCTTGAGGTTGAAAGTTCT 39981 Query 115344 GCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402 | | ||| ||| |||| ||||| |||||| ||||||||||| | || || Sbjct 39982 G--ATACTATTG-ACAATGTAAAGGCCAAAATTCAGGATAAAGAAGGAATTCCTCCAGAC 40038 Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462 ||||| || ||||||| || || || || | || |||| |||| | ||||||||| Sbjct 40039 CAGCAGAGGCTTATTTTCGCTGGAAAGCAGCTCGAGGATGGTCGAACCCTCGCCGATTAT 40098 Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 ||||| |||||||| || || ||||| ||||| | | || || || |||| Sbjct 40099 AACATACAAAAAGAATCAACCCTACATTTGGTGCTCCGTTTACGCGGTGGAA 40150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425135359197760