Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrullus_20lanatus_20[genbank_20GCA_5F000238415.1_202011-12-13] 40,248 sequences; 321,046,825 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq29839 251 8e-62 seq4500 93.3 5e-14 seq29072 91.5 2e-13 seq29064 87.8 2e-12 seq32721 86.0 7e-12 seq29493 86.0 7e-12 seq26595 86.0 7e-12 seq15285 86.0 7e-12 seq3197 86.0 7e-12 seq37366 84.2 2e-11 seq32935 84.2 2e-11 seq29061 84.2 2e-11 seq27369 84.2 2e-11 seq29059 82.4 8e-11 seq28268 82.4 8e-11 seq28244 82.4 8e-11 seq14725 82.4 8e-11 seq9264 82.4 8e-11 seq4598 82.4 8e-11 seq1221 82.4 8e-11 >seq29839 Length=13537 Score = 251 bits (278), Expect = 8e-62 Identities = 604/897 (67%), Gaps = 25/897 (3%) Strand=Plus/Minus Query 92803 TTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTCCAAAGATATCGAA 92862 || || ||||| || ||| |||| ||||||||||| ||||| || | ||| || ||| | Sbjct 5144 TTCTGATATTCACCGACTCTTTTCTCAAAGAAATTAGTCTTCCCCTGCAACGAAATCAAC 5085 Query 92863 TTCA--CTAGTGATTGGATTCTTGGCGTTATAATACTTTTCACCGATC--AACTCGTACA 92918 | || | | | ||||| | | ||||| |||| | ||| || | | || Sbjct 5084 TCCATCCAATCAAACGGATTTTGAACATTATAGA--TTTTGCCATATCCCAAGGC-TCCA 5028 Query 92919 AT-AATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGA 92977 | || ||||| || |||||||||||||| || |||||| || | ||||||||| | | Sbjct 5027 ACCAACCTATCTGCCACAAATTCTATGTATTGGCTCATCAAGTCCCCATTCATTCCAACA 4968 Query 92978 AGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAG 93037 ||| || || | ||| || || || || | || || ||||||| ||| | | Sbjct 4967 AGAGCCACCGGCAAAGCATCACACACAAATTCCCTTTCTATATCAACGGCCTCTGTTACA 4908 Query 93038 ATTTCTATTACTCTACTATTTGGTGGTTTTTGTACGACATAATTG-TACATTAAGCACGC 93096 || || | |||| | | | | ||| | | | ||| |||| || || || Sbjct 4907 ATCTCCCTCACTCGA-TCCTCACTCAATTTCTTCCTCAACAATGAATACAACAAACAAGC 4849 Query 93097 AAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGG 93156 ||| || ||| | ||||| |||||||| |||||||| || ||| ||||| || || Sbjct 4848 AAAATCACAATGAAGCCCTTCATCTCGTGAAATCAACTCGTTTGAGAACGTTAATCCAGG 4789 Query 93157 TAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA-AAACTACCAGaaaaaaaTATAC 93215 | | || ||||| || | ||| || || || ||| |||||||| || || || || | Sbjct 4788 CATTAACCCACGTTTTTTCAACCAGAAAATGGA-GCAGAAACTACCTGAGAAGAAAATTC 4730 Query 93216 CTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTAC-TGCTG--- 93271 | || || ||||| |||| |||||| ||||| || || ||| | |||| Sbjct 4729 CCTCAACACAGGCAAACGCCAAAATACGCTCGGCGAA-----CG--ATTCCGTGCTATCA 4677 Query 93272 ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTA 93331 ||||| ||||| |||||||| || || ||||| | ||| || | ||||| ||||| Sbjct 4676 ATCCACTTTAACGCCCAATCAGCCTTCTTCTTGACACAGGGGACAGTTTCAATAGCACGG 4617 Query 93332 AATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATT 93391 || | || ||||| |||| | || || || || | | ||| ||||| Sbjct 4616 AACAACCGATTCTTCTCGTTTGAATTTTTGATATAGGTTTCAAGGAGAAGACTGTACATC 4557 Query 93392 TCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATC 93451 || ||||||| ||||| || |||||||||||||| |||||| ||||||||| | | Sbjct 4556 TCGGAATGGATGTTCTCGATGGCAATTTGGAATCCATAGAAAGCTCTAGCTTCAGCAACT 4497 Query 93452 TGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCa 93511 || ||||||| || | | ||||||| || || || ||||| || || || Sbjct 4496 TGGACTTCTTTCATGAACCGTCCGGCGAGATTCTCCAAAACGATGCCATCAGAAGCAGCG 4437 Query 93512 aaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCT-TTAAGCTTATCCCAATC 93570 || || || | | ||| | || ||||||||||| ||| ||||| | ||||| | Sbjct 4436 AAGAAGGCAAGGACATGAGTGATGAAATGTTTCTCGTCAGAAGTTAAGGAT-TCCCAGTG 4378 Query 93571 GGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTT 93630 | || |||| ||| ||||||||||| ||| ||||||| || || ||||| ||||| || Sbjct 4377 GCGAAGGTCTTGTGAGAGATCGACTTCCTCGGCAGTCCAGAAGGAGGCTTCGGCTTTCTT 4318 Query 93631 GTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGGTT 93687 |||||| ||||| || | |||| |||||||| || ||| || |||| ||||| Sbjct 4317 GTACATCTCCCAGATTTGAGGATAATGAATTGGGAACATGCAGAAGCGATCGGGGTT 4261 >seq4500 Length=22071 Score = 93.3 bits (102), Expect = 5e-14 Identities = 88/110 (80%), Gaps = 7/110 (6%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || Sbjct 16383 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGG 16326 Query 126321 GCGTGGGTTCGAACCCCACACCTGACAAAT-TATTATTGGAATTTTTGTT 126369 |||||||||| || ||||| ||||||||| ||| || || || || || Sbjct 16325 GCGTGGGTTCAAATCCCACTTCTGACAAATCTATATTTTGATTTCTTTTT 16276 >seq29072 Length=33731 Score = 91.5 bits (100), Expect = 2e-13 Identities = 79/97 (81%), Gaps = 6/97 (6%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || Sbjct 29800 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGG 29743 Query 126321 GCGTGGGTTCGAACCCCACACCTGACAAATTATTATT 126357 |||||||||| || ||||| |||||| ||||||| Sbjct 29742 GCGTGGGTTCAAATCCCACTTCTGACATTATATTATT 29706 >seq29064 Length=27311 Score = 87.8 bits (96), Expect = 2e-12 Identities = 86/108 (80%), Gaps = 10/108 (9%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA----G 126321 |||||| ||||||||||||||||||||||||| | ||| |||||| | ||| || | Sbjct 7357 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CTTCGAGAGAGGG 7414 Query 126322 CGTGGGTTCGAACCCCACACCTGACAAATTATTATTGGAATTTTTGTT 126369 ||||||||| || ||||| ||||||| || |||| ||||||| || Sbjct 7415 CGTGGGTTCAAATCCCACTTCTGACAA--TAATATT--AATTTTTATT 7458 >seq32721 Length=74694 Score = 86.0 bits (94), Expect = 7e-12 Identities = 76/94 (81%), Gaps = 2/94 (2%) Strand=Plus/Minus Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCG 126323 ||| ||| |||||||||||||||||||||||||||||| | |||||| || | ||| Sbjct 55444 CAGACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCG 55387 Query 126324 TGGGTTCGAACCCCACACCTGACAAATTATTATT 126357 ||||||| || |||||| ||| ||| || || || Sbjct 55386 TGGGTTCAAATCCCACAGCTGTCAATTTTTTCTT 55353 >seq29493 Length=21574 Score = 86.0 bits (94), Expect = 7e-12 Identities = 72/87 (83%), Gaps = 6/87 (7%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || Sbjct 8444 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGG 8387 Query 126321 GCGTGGGTTCGAACCCCACACCTGACA 126347 |||||||||| || ||||| |||||| Sbjct 8386 GCGTGGGTTCAAATCCCACTTCTGACA 8360 >seq26595 Length=52867 Score = 86.0 bits (94), Expect = 7e-12 Identities = 76/94 (81%), Gaps = 2/94 (2%) Strand=Plus/Plus Query 126262 TACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAG 126321 || || ||| |||||||||||||||||||||||||||||| | |||||| || | | Sbjct 22422 TAAAGACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGG 22479 Query 126322 CGTGGGTTCGAACCCCACACCTGACAAATTATTA 126355 ||||||||| || |||||| ||| ||| || ||| Sbjct 22480 CGTGGGTTCAAATCCCACAGCTGTCAAGTTTTTA 22513 >seq15285 Length=53154 Score = 86.0 bits (94), Expect = 7e-12 Identities = 72/87 (83%), Gaps = 6/87 (7%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || Sbjct 27800 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGG 27857 Query 126321 GCGTGGGTTCGAACCCCACACCTGACA 126347 |||||||||| || ||||| |||||| Sbjct 27858 GCGTGGGTTCAAATCCCACTTCTGACA 27884 >seq3197 Length=55779 Score = 86.0 bits (94), Expect = 7e-12 Identities = 70/84 (83%), Gaps = 2/84 (2%) Strand=Plus/Minus Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327 ||| |||||||||||||||||||||||||||||| | |||||||| || ||||||| Sbjct 23538 CAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGTTCGAAAGG--GCGTGGG 23481 Query 126328 TTCGAACCCCACACCTGACAAATT 126351 ||| || |||||| ||| || ||| Sbjct 23480 TTCAAATCCCACAGCTGTCATATT 23457 >seq37366 Length=199436 Score = 84.2 bits (92), Expect = 2e-11 Identities = 72/88 (82%), Gaps = 6/88 (7%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGG----GA 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| | |||| | Sbjct 48044 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CTTCGGAAGAGG 48101 Query 126321 GCGTGGGTTCGAACCCCACACCTGACAA 126348 |||||||||| || ||||| ||||||| Sbjct 48102 GCGTGGGTTCAAATCCCACTTCTGACAA 48129 >seq32935 Length=27720 Score = 84.2 bits (92), Expect = 2e-11 Identities = 77/95 (81%), Gaps = 7/95 (7%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA----G 126321 |||||| ||||||||||||||||||||||||| | ||| |||||| | ||| || | Sbjct 16673 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CTTCGTGAGAGGG 16730 Query 126322 CGTGGGTTCGAACCCCACACCTGACA-AATTATTA 126355 ||||||||| || ||||| |||||| |||| ||| Sbjct 16731 CGTGGGTTCAAATCCCACTTCTGACATAATTTTTA 16765 >seq29061 Length=6482 Score = 84.2 bits (92), Expect = 2e-11 Identities = 75/93 (81%), Gaps = 6/93 (6%) Strand=Plus/Minus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA----G 126321 |||||| ||||||||||||||||||||||||| | ||| |||||| | ||| || | Sbjct 1191 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CTTCGTGAGAGGG 1134 Query 126322 CGTGGGTTCGAACCCCACACCTGACAAATTATT 126354 ||||||||| || ||||| |||||| ||||| Sbjct 1133 CGTGGGTTCAAATCCCACTTCTGACATTTTATT 1101 >seq27369 Length=35584 Score = 84.2 bits (92), Expect = 2e-11 Identities = 73/90 (81%), Gaps = 2/90 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGT 126324 || ||| |||||||||||||||||||||||||||||| | |||||| || | |||| Sbjct 13125 AGACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGGAAGGGCGT 13182 Query 126325 GGGTTCGAACCCCACACCTGACAAATTATT 126354 |||||| || |||||| ||| ||| || || Sbjct 13183 GGGTTCAAATCCCACAGCTGTCAACTTTTT 13212 >seq29059 Length=75931 Score = 82.4 bits (90), Expect = 8e-11 Identities = 71/87 (82%), Gaps = 6/87 (7%) Strand=Plus/Minus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA----G 126321 |||||| ||||||||||||||||||||||||| | ||| |||||| | ||| || | Sbjct 73485 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CTTCGAGAGAGGG 73428 Query 126322 CGTGGGTTCGAACCCCACACCTGACAA 126348 ||||||||| || ||||| ||||||| Sbjct 73427 CGTGGGTTCAAATCCCACTTCTGACAA 73401 >seq28268 Length=129275 Score = 82.4 bits (90), Expect = 8e-11 Identities = 78/99 (79%), Gaps = 2/99 (2%) Strand=Plus/Minus Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327 ||| |||||||||||||||||||||||||||||| | |||||| || | ||||||| Sbjct 102517 CAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGTGGG 102460 Query 126328 TTCGAACCCCACACCTGACAAATTATTATTGGAATTTTT 126366 ||| || |||||| ||| || || || || |||||| Sbjct 102459 TTCAAATCCCACAGCTGTCATGTTTTTCTTTTCATTTTT 102421 >seq28244 Length=41618 Score = 82.4 bits (90), Expect = 8e-11 Identities = 76/94 (81%), Gaps = 3/94 (3%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGT 126324 || ||| |||||||||||||||||||||||||||||| | |||||| || | |||| Sbjct 10200 AGACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGT 10257 Query 126325 GGGTTCGAACCCCACACCTGACA-AATTATTATT 126357 |||||| || |||||| ||| || |||| | ||| Sbjct 10258 GGGTTCAAATCCCACAGCTGTCAGAATTTTCATT 10291 >seq14725 Length=78396 Score = 82.4 bits (90), Expect = 8e-11 Identities = 71/87 (82%), Gaps = 6/87 (7%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA----G 126321 |||||| ||||||||||||||||||||||||| | ||| |||||| | ||| || | Sbjct 18229 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CTTCGAGAGAGGG 18286 Query 126322 CGTGGGTTCGAACCCCACACCTGACAA 126348 ||||||||| || ||||| ||||||| Sbjct 18287 CGTGGGTTCAAATCCCACTTCTGACAA 18313 >seq9264 Length=13597 Score = 82.4 bits (90), Expect = 8e-11 Identities = 68/82 (83%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 86585 CCATGTAGGATTTGAACCTACGACCCTCGTGTTATCAGCACGATGCTCTAACC-ACTGAG 86643 ||||| ||| || |||||| ||||| ||| ||||| ||||||||||||||||| |||||| Sbjct 12352 CCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGATGCTCTAACCAACTGAG 12411 Query 86644 CTAACGGACTTCTTATTGTTCA 86665 |||| | | |||||| |||| Sbjct 12412 CTAATAGGCCACTTATTATTCA 12433 >seq4598 Length=7276 Score = 82.4 bits (90), Expect = 8e-11 Identities = 76/95 (80%), Gaps = 6/95 (6%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| | ||| || Sbjct 6213 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CTTCGTGAGAGG 6270 Query 126321 GCGTGGGTTCGAACCCCACACCTGACAAATTATTA 126355 |||||||||| || ||||| |||||| || ||| Sbjct 6271 GCGTGGGTTCAAATCCCACTTCTGACATTTTTTTA 6305 >seq1221 Length=16661 Score = 82.4 bits (90), Expect = 8e-11 Identities = 74/92 (80%), Gaps = 2/92 (2%) Strand=Plus/Plus Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327 ||| |||||||||||||||||||||||||||||| | |||||| || | ||||||| Sbjct 5744 CAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGTGGG 5801 Query 126328 TTCGAACCCCACACCTGACAAATTATTATTGG 126359 ||| || |||||| ||| || || ||| ||| Sbjct 5802 TTCAAATCCCACAGCTGTCATTTTTTTAATGG 5833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556580643331520