Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrullus_20lanatus_20[genbank_20GCA_5F000238415.1_202011-12-13] 40,248 sequences; 321,046,825 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq29839 136 7e-27 >seq29839 Length=13537 Score = 136 bits (150), Expect = 7e-27 Identities = 377/565 (67%), Gaps = 25/565 (4%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| ||||||||||| || | |||| |||||| |||||||| | || || Sbjct 4303 ATCTGGGAGATGTACAAGAAAGCCGAAGCCTCCTTCTGGACTGCCGAGGAAGTCGATCTC 4362 Query 42360 GC-CAAGGACACGGCCGGCTGGGAGTC----ACTGTCTGAGAACGAAAAGTTTTTCCTCA 42414 | |||| | ||| |||||| || ||| ||||| ||| || |||| ||| Sbjct 4363 TCACAAGACCTTCGCCA-CTGGGAATCCTTAACT-TCTGA---CGAGAAACATTTCATCA 4417 Query 42415 AAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCA 42474 | | || ||||||||||| || ||||| ||||| || ||||| || ||| Sbjct 4418 CTCATGTCCTTGCCTTCTTCGCTGCTTCTGATGGCATCGTTTTGGAGAATCTCGCCGGAC 4477 Query 42475 GGTTCATGAAAGAGGTGCAGTACTT--TGAGGC--GCGCTGCTTCTACGGCTTCCAGATA 42530 ||||||||||||| || || | || ||| || | ||| ||||| || ||||| || Sbjct 4478 GGTTCATGAAAGAAGTCCA--AGTTGCTGAAGCTAGAGCT--TTCTATGGATTCCAAATT 4533 Query 42531 GCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGAT 42590 ||||| |||||| | || || ||| ||||| || || | || || ||| || Sbjct 4534 GCCATCGAGAACATCCATTCCGAGATGTACAGTCTTCTCCTTGAAACCTATATCAAAAAT 4593 Query 42591 CCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAG 42650 | |||| || || ||||| || || || || | ||||| ||||||||||| Sbjct 4594 TCAAACGAGAAGAATCGGTTGTTCCGTGCTATTGAAACTGTCCCCTGTGTCAAGAAGAAG 4653 Query 42651 GCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTA 42710 || || |||||| | || ||||| || || | || | | |||||| |||| | | | Sbjct 4654 GCTGATTGGGCGTTAAAGTGGATTGATAG-CACG--GAATCGTTCGCCGAGCGTATTTTG 4710 Query 42711 GCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTC 42770 || ||| || || ||||| || |||||||| || ||| |||||| |||||| | Sbjct 4711 GCGTTTGCCTGTGTTGAGGGAATTTTCTTCTCAGGTAGTTTCTGCTCCATTTTCTGGTTG 4770 Query 42771 AAGCAGAAGGT--GTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACG 42828 || | || || || ||||| ||| | || ||||| ||||| | || | || | Sbjct 4771 AA--AAAACGTGGGTTAATGCCTGGATTAACGTTCTCAAACGAGTTGATTTCACGAGATG 4828 Query 42829 AGGGGCTGCATAGGGACTTTGCCTG 42853 | ||||| ||| | || ||||| || Sbjct 4829 AAGGGCTTCATTGTGATTTTGCTTG 4853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 943864102948480