Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrullus_20lanatus_20[genbank_20GCA_5F000238415.1_202011-12-13] 40,248 sequences; 321,046,825 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq3045 122 8e-23 seq18711 116 3e-21 seq8166 107 2e-18 seq26478 104 2e-17 seq21318 96.9 3e-15 seq22339 95.1 1e-14 seq14089 91.5 1e-13 seq31175 89.7 5e-13 >seq3045 Length=115554 Score = 122 bits (134), Expect = 8e-23 Identities = 167/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||||| | ||| || || || ||||||||||| |||||||| || ||| Sbjct 11721 ATGCCACCACGGAGCCGGAGCACGAGGTGGAGAGTTGATTCCTTCTGGATATTGTAGTCG 11780 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | |||| || || | ||| ||||| ||| | || | ||||||||||| || Sbjct 11781 GCAAGGGTTCGGCCGTCCTCAAGTTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCGGGG 11840 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 ||||| ||||| || || || || || ||| | || | || | ||||||||| ||||| Sbjct 11841 GGAATTCCTTCCTTGTCCTGGATCTTGGCTTTTA-CGTTGTCAATGGTGTCGGAGGACTC 11899 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || ||||| || | || || ||||| || ||||| || || |||||||| Sbjct 11900 CACCTCGAGGGTGATTGTCTTCCCGGTAAGGGTTTTGACGAAGATTTGCAT 11950 Score = 113 bits (124), Expect = 4e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | ||| || ||||| || || || ||||| ||||| || ||||| Sbjct 11265 ATACCACCACGGAGACGCAAGACAAGATGGAGAGTAGACTCCTTCTGGATGTTGTAATCT 11324 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| ||| ||||||||||| || || | || | || || ||||| || Sbjct 11325 GCAAGAGTTCGGCCATCTTCCAATTGTTTCCCAGCAAAGATGAGTCTCTGTTGGTCTGGG 11384 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 ||||| ||||| || |||||||| || || | || | || | ||||| |||||||| Sbjct 11385 GGAATACCTTCCTTGTCTTGAATCTTGGCCTTCA-CGTTGTCAATTGTGTCTGAAGACTC 11443 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || | || | || || ||||| |||||||| |||||||||||||| Sbjct 11444 AACCTCCAAGGTGATGGTCTTTCCGGTGAGAGTTTTCACAAAAATTTGCAT 11494 >seq18711 Length=80062 Score = 116 bits (128), Expect = 3e-21 Identities = 166/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| || || | || ||| | || || || ||||||||||| |||||||| ||| Sbjct 40835 ATCCCTCCACGAAGACGCAGCACCAAGTGGAGAGTCGATTCCTTTTGAATATTATAGTCG 40776 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || | ||| |||||||| || || ||| | || || | || ||||| || Sbjct 40775 GCTAGAGTCCTGCCATCCTCCAATTGCTTCCCAGCGAAAATTAACCTCTGTTGGTCTGGT 40716 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || || |||||||||||||| || || ||| | || | || | || || ||| ||| Sbjct 40715 GGGATCCCTTCTTTATCTTGTATCTTAGCTTTAA-CGTTGTCGATAGTATCTGAACTCTC 40657 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| | ||||| ||||| ||||||| || || |||||||||||||| Sbjct 40656 AACTTCCAAAGTAATTGTTTTTCCGGTTAAGGTCTTCACAAAAATTTGCAT 40606 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 ||||| ||||| | | | ||| | ||| || |||||||| ||||| || ||||||||| Sbjct 40151 ATTCCACCGCGTAAACGGAGCACCAAATGTAGGGTTGATTCTTTTTGTATGTTATAATCG 40092 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || |||| | ||| || | || ||||| ||| | || | | |||||||| || Sbjct 40091 GCGAGGGTTCGACCATCCTCGAGCTGCTTTCCAGCGAAAATAAGCCTCTGCTGGTCTGGA 40032 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| ||||||||||| |||||||| || | || | || || ||| || Sbjct 40031 GGAATTCCTTCTTTATCCTGAATTTTGGCCTTTACATTGTCAATAGTATCAGAACTTTCA 39972 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || || || || | ||||||||||| |||||||| || || ||||||||| Sbjct 39971 ACCTCAAGGGTTATTGTTTTGCCGGTGAGAGTTTTCACGAAGATTTGCATC 39921 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 ||||| || || || | || ||| || || || || || |||||||| ||||| || ||| Sbjct 40607 ATTCCACCACGAAGACGCAGCACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCG 40548 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || ||| || | || || |||||| | ||||| | |||||||||||| Sbjct 40547 GCTAGTGTCCGTCCATCTTCGAGCTGCTTGCCTGCGAAGATCAACCTTTGCTGGTCCGGG 40488 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| |||||||| |||||||| || ||||| || | ||||| || || Sbjct 40487 GGAATACCTTCTTTGTCTTGAATCTTAGCTTTGACATTGTCGATTGTGTCTGAGCTTTCA 40428 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || |||| || || || || || ||||| |||||||||||||| Sbjct 40427 ACCTCTAGTGTAATAGTCTTCCCCGTAAGCGTTTTGACAAAAATTTGCAT 40378 >seq8166 Length=147256 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || |||||||| || || ||||| ||||| || ||||| ||||| || || ||| Sbjct 120221 CCACCACGGAGCCTTAAGACAAGATGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCA 120280 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| | ||| |||| || || || ||| | || | || |||||||||||||| Sbjct 120281 AGTGTTCGACCATCCTCCAGCTGCTTACCGGCGAAAATGAGACGCTGCTGGTCCGGCGGT 120340 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 || || || || || ||||| ||| || | || | ||| || ||| |||||| Sbjct 120341 ATTCCCTCCTTGTCCTGAATCTTTGCCTTAACATTATCGATGGTATCAGAACTCTCGACC 120400 Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||||| | || || ||||| || ||||| || || || ||||| Sbjct 120401 TCGAGAGTTATGGTCTTCCCGGTAAGCGTTTTCACGAAGATCTGCAT 120447 >seq26478 Length=75715 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 ||||| | ||| | | ||| || || ||||| |||||||| |||||||| || ||| Sbjct 13965 CCTCCCCTGAGACGGAGCACAAGGTGGAGCGTGGATTCCTTCTGGATATTGTAGTCGGCA 13906 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | |||| || || | || ||||| ||| | ||||| || |||||||| || || Sbjct 13905 AGGGTTCGGCCGTCCTCAAGCTGCTTTCCGGCGAAAATCAAACGCTGCTGGTCGGGGGGG 13846 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 || || || || || || || ||| |||| || | ||| ||||| ||||||| Sbjct 13845 ATTCCCTCCTTGTCCTGGATCTTTGCCTTGACATTGTCAATGGTATCGGAGCTCTCGACT 13786 Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| |||| || || || ||||| ||||| || || || ||||| Sbjct 13785 TCGAGGGTAATGGTCTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 13739 >seq21318 Length=12341 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || || || || | ||||| ||| || || |||||||| |||||||| |||||| Sbjct 5199 ATCCCACCACGAAGTCTAAGCACTAAATGGAGTGTAGATTCCTTCTGGATATTGTAATCG 5258 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| ||| || | ||| || || || | || | | || ||||| || Sbjct 5259 GCAAGCGTTCGGCCATCCTCAAGTTGCTTACCAGCAAAGATAAGCCTCTGTTGGTCGGGT 5318 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 |||||||| |||||||||||||| ||| || | || | ||||| || || Sbjct 5319 GGAATGCCCTCTTTATCTTGAATCTTTGCCTTTACATTGTCAATTGTGTCTGAGCTTTCC 5378 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || ||||| || | |||||||| || || ||||||| || ||||||||| Sbjct 5379 ACCTCGAGGGTGATTGTTTTGCCAGTAAGGGTTTTTATGAAGATTTGCATC 5429 Score = 89.7 bits (98), Expect = 5e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATC-GCTGACGGTTTTAGAATCGT 45189 ||| | ||| || ||||||||||||||||| || ||||| ||| | ||| | ||| | Sbjct 4307 CACCAAATGGAGAGTTGATTCCTTTTGGATGTTGTAATCAGCT-AAAGTTCTGCCATCTT 4365 Query 45190 CCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTT 45249 | | |||||| ||||| | |||| | |||||||| || || || || || || |||| Sbjct 4366 CAAGTTGTTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGTGGGATTCCCTCCTTGTCTT 4425 Query 45250 GAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTT 45309 |||| ||| || | || | |||||||| || ||||| ||||| | || | Sbjct 4426 GAATCTTTGCCTTCACATTGTCGATAGTGTCGGAGCTTTCTACTTCCAGAGTGATGGTCT 4485 Query 45310 TGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||| || | || || || ||||| ||||| Sbjct 4486 TGCCCGTCAATGTCTTCACGAAAATCTGCAT 4516 >seq22339 Length=139203 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || || || || ||||||||||||||||| || || ||| | || ||| || Sbjct 90784 ACCAGGTGGAGGGTTGATTCCTTTTGGATGTTGTAGTCGGCCAACGTACGGCCATCCTCG 90843 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | ||| ||||| ||| | || | |||||||| || || ||||| ||||| || || || Sbjct 90844 AGTTGCTTTCCGGCGAAAATGAGACGTTGCTGATCTGGGGGAATTCCTTCCTTGTCCTGG 90903 Query 45252 ATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 || || |||| || | || | ||| || || ||||| || || || || | || || Sbjct 90904 ATCTTGGCCTTGA-CGTTGTCGATGGTATCAGACGACTCAACCTCAAGGGTGATGGTCTT 90962 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 ||| ||||| ||||| || || ||||||||| Sbjct 90963 GCCAGTTAGGGTTTTAACGAAGATTTGCATC 90993 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || || || || || || ||||||||||| || || ||| | || ||| || Sbjct 90556 ACCAGGTGGAGAGTAGACTCCTTTTGGATGTTGTAGTCGGCCAACGTACGGCCATCCTCG 90615 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | ||| ||||| ||| | || | |||||||| || || ||||| |||||||| || || Sbjct 90616 AGTTGCTTTCCGGCGAAGATGAGACGTTGCTGATCTGGGGGAATTCCTTCTTTGTCCTGG 90675 Query 45252 ATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 || || || | || | || | ||| || || |||||||| || || || | || || Sbjct 90676 ATCTTGGCCTTTA-CGTTGTCGATGGTATCAGATGACTCGACCTCAAGGGTGATGGTCTT 90734 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||| || || || || ||||||||||| Sbjct 90735 GCCGGTCAGGGTCTTGACGAAAATTTGCAT 90764 >seq14089 Length=105206 Score = 91.5 bits (100), Expect = 1e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 ||||| | |||||||| || | || || ||||||||||||||||| ||||||||| Sbjct 70557 CCTCCCCTAAGCCTCAAGACCAAGTGAAGGGTTGATTCCTTTTGGATGTTATAATCGGCA 70616 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| | ||| |||||||| || || || | || |||| |||||||| || ||| Sbjct 70617 AGCGTTCGACCATCTTCCAATTGCTTACCAGCAAAAATTAATCTCTGCTGGTCAGGAGGA 70676 Query 45234 ATGCCTTCTTTATCTTGAAT 45253 || ||||| || || || || Sbjct 70677 ATACCTTCCTTGTCCTGCAT 70696 >seq31175 Length=13598 Score = 89.7 bits (98), Expect = 5e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || || || || ||||||||||||||||| || || ||| | || ||| || Sbjct 7459 ACCAGGTGGAGGGTTGATTCCTTTTGGATGTTGTAGTCGGCCAACGTACGGCCATCCTCG 7518 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | ||| ||||| ||| | || | ||||||| || || ||||| ||||| || || || Sbjct 7519 AGTTGCTTTCCGGCGAAAATGAGAAGTTGCTGATCTGGGGGAATTCCTTCCTTGTCCTGG 7578 Query 45252 ATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 || || |||| || | || | ||| || || ||||| || || || || | || || Sbjct 7579 ATCTTGGCCTTGA-CGTTGTCGATGGTATCAGACGACTCAACCTCAAGGGTGATGGTCTT 7637 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 ||| ||||| ||||| || || ||||||||| Sbjct 7638 GCCAGTTAGGGTTTTAACGAAGATTTGCATC 7668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451775797190080