Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrullus_20lanatus_20[genbank_20GCA_5F000238415.1_202011-12-13] 40,248 sequences; 321,046,825 total letters Query= NC_016656.1 Length=45890 Score E Sequences producing significant alignments: (Bits) Value seq16876 114 4e-21 >seq16876 Length=31318 Score = 114 bits (126), Expect = 4e-21 Identities = 188/270 (70%), Gaps = 6/270 (2%) Strand=Plus/Plus Query 26517 TTGGGAGATTAATTTTTCAGTATGCGAGTTTT--AATAACAGCCGTTCTCTTCATTTCTT 26574 |||| |||| | || || ||||| ||| || || ||| ||||||| | ||||| || Sbjct 28046 TTGGCCGATTGGTCTTCCAATATGCTAGTGTTTCAACAACTCCCGTTCTTTACATTTATT 28105 Query 26575 TCTTGCTACTTGGCCGGTTGTTGGCATATGGCTGACATCTATGGGTATCTGCACAATGGC 26634 || ||| ||||||| || | || | | | ||| || | ||||| |||| ||||| Sbjct 28106 CCTAGCTGCTTGGCCTGTAATAGGTA----GTTCACAGCTTTAGGTATTAGCACTATGGC 28161 Query 26635 ATTTAACCTAAATGGTTTTAACTTTAACCAGTCAGTAGTAGATGTTAATGGAAAGATAAT 26694 || ||| ||||| ||| || || ||||| | ||||| ||| | | || | |||| Sbjct 28162 TTTCAACTTAAATTGTTGAAATTTCAACCAATTTGTAGTTGATAGTCAAGGTCATGTAAT 28221 Query 26695 ACCTACATGGGCTGATGTATTAAACCGAGCTAACCTCGGCTTTGAAGTTATGCACGAGCG 26754 | ||| ||| | ||| | | |||| ||||| || || ||||||||||| || || Sbjct 28222 TCATACCTGGCCAGATATTATTAACCATGCTAATCTTGGTAGGGAAGTTATGCATGAACG 28281 Query 26755 TAATGCTCATAACTTTCCACTTGACTTAGC 26784 |||||| || ||||| || || ||| |||| Sbjct 28282 TAATGCGCAAAACTTCCCTCTAGACCTAGC 28311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146656272850752