Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrullus_20lanatus_20[genbank_20GCA_5F000238415.1_202011-12-13] 40,248 sequences; 321,046,825 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq29839 114 2e-20 >seq29839 Length=13537 Score = 114 bits (126), Expect = 2e-20 Identities = 337/511 (66%), Gaps = 19/511 (4%) Strand=Plus/Minus Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250 |||||||| | ||| | | ||| | ||||||||| | |||| || |||||||| Sbjct 4793 CCAGGCATTAACCCACGTTTTTTCAACCAGAAAATGGAGCAGAAACTACCTGAGAAGAAA 4734 Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310 || ||||| || || ||||| | | ||| |||| || | | | || Sbjct 4733 ATTCCCTCAACACAGGCAAACGCCAAAATACGCTCGGCGAACGATTCCGTGCTATCA--- 4677 Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGG 48370 ||||| | |||||| || ||||||||||||| || || | || || || || ||| Sbjct 4676 ATCCACTTTAACGCCCAATCAGCCTTCTTCTTGACACAGGGGACAGTTTCAATAGCACGG 4617 Query 48371 AAGAGC---TTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCG 48424 || | | ||||| ||| || | | |||||| | ||| || | | Sbjct 4616 AACAACCGATTCTT---CTCGTTTGAATTTTTGATATAGGTTTCAAGGAGAAGACT---G 4563 Query 48425 TACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCA 48484 |||||||| || || | ||||| || || || ||||| || ||||| || || || ||| Sbjct 4562 TACATCTCGGAATGGATGTTCTCGATGGCAATTTGGAATCCATAGAAAGCTCTAGCTTCA 4503 Query 48485 AACACCTGCACTTCTGTGGAGAATCTCTCCAGC-AGATTCTCATTGACTATCCCATCTGA 48543 || || |||||| | ||| | ||| || |||||||| || || ||||| || Sbjct 4502 GCAACTTGGACTTCTTTCATGAACCG-TCCGGCGAGATTCTCCAAAACGATGCCATCAGA 4444 Query 48544 AGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATT 48603 |||||| ||||||||||||||||| | | |||||| ||||| || | || ||| Sbjct 4443 AGCAGCGAAGAAGGCAAGGACATGAGTGATGAAATGTTTCTCGTCAGAAGTTA-AGGATT 4385 Query 48604 -CCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTG 48662 |||| | | ||||| || || ||||| || ||||||||||||| || | Sbjct 4384 CCCAGTGGCGAAGGTCTTGTGAGAGATCGACTTCCTCGGCAGTCCAGAAGGAGGCTTCGG 4325 Query 48663 CTTTTTTGTACATGCCCCATATGTCCGGATA 48693 |||| |||||||| |||| || | ||||| Sbjct 4324 CTTTCTTGTACATCTCCCAGATTTGAGGATA 4294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931064145848320