Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrullus_20lanatus_20[genbank_20GCA_5F000238415.1_202011-12-13] 40,248 sequences; 321,046,825 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq22339 120 2e-22 seq3045 118 7e-22 seq26478 113 3e-20 seq8166 107 1e-18 seq31175 104 2e-17 seq18711 98.7 6e-16 >seq22339 Length=139203 Score = 120 bits (132), Expect = 2e-22 Identities = 158/217 (73%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 |||||| ||||||| |||| ||||||||||||||| || || | || | | |||| Sbjct 89868 CAGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGCGAGAGTCCTTCCATC 89927 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| ||||| || ||||||||||| | |||||||| | || | || |||||||| Sbjct 89928 CTCCAGCTGCTTCCCTGCGAAGATCAGCCTCTGCTGGTCCGGAGGGATGCCTTCCTTGTC 89987 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTA 34940 | ||||| ||| || || ||||||| ||| | ||| || || | ||| | Sbjct 89988 CTGAATTTTAGCTTTTAC--AT--TATCGATCGTGTCAGAGCTCTCCACCTCCAAGGTGA 90043 Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||||||| || | ||| || || ||||||||||| Sbjct 90044 TGGTCTTTCCGGTCAAGGTTTTCACGAAGATCTGCAT 90080 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||| | || |||||| || ||||| ||||| | | | || |||| Sbjct 90553 AGGACCAGGTGGAGAGTAGACTCCTTTTGGATGTTGTAGTCGGCCAACGTACGGCCATCC 90612 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || |||||||||||||||||||| || |||||||| ||| | || | || || ||||| Sbjct 90613 TCGAGTTGCTTTCCGGCGAAGATGAGACGTTGCTGATCTGGGGGAATTCCTTCTTTGTCC 90672 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | || | ||| | |||||| |||| ||| |||||| Sbjct 90673 TGGATCTTGGCCTTTACGTTGTCGATGGTATCAGATGACTCGACCTCAAGGGTGATGGTC 90732 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || || |||||||| || || || |||||| Sbjct 90733 TTGCCGGTCAGGGTCTTGACGAAAATTTGCATG 90765 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||| | ||| ||||| || ||||| ||||| | | | || |||| Sbjct 90781 AGGACCAGGTGGAGGGTTGATTCCTTTTGGATGTTGTAGTCGGCCAACGTACGGCCATCC 90840 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || ||||||||||||||||| || || |||||||| ||| | || | || |||||||| Sbjct 90841 TCGAGTTGCTTTCCGGCGAAAATGAGACGTTGCTGATCTGGGGGAATTCCTTCCTTGTCC 90900 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | ||| | ||| || |||| ||| |||||| Sbjct 90901 TGGATCTTGGCCTTGACGTTGTCGATGGTATCAGACGACTCAACCTCAAGGGTGATGGTC 90960 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || ||||| || || ||||| ||||| Sbjct 90961 TTGCCAGTTAGGGTTTTAACGAAGATTTGCAT 90992 Score = 104 bits (114), Expect = 2e-17 Identities = 151/213 (71%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 || ||||| | ||| ||||||||| ||||| || || | ||| | || | || || Sbjct 90328 ACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCAGCAAGGGTACGACCGTCTTCT 90387 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 | |||||| ||||||||||| |||| ||| |||||| | || | || |||||||| | Sbjct 90388 AATTGCTTCCCGGCGAAGATGAGTCTTTGTTGGTCTGGGGGAATTCCTTCCTTGTCCTGG 90447 Query 34889 ATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGT 34944 || ||| ||||| | ||||||| ||| || || || || | ||| ||||| Sbjct 90448 ATCTTTGCCTTGAC----GTTATCGATGGTATCAGAGGATTCAACCTCGAGGGTGATGGT 90503 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || |||||||| || || |||||||| Sbjct 90504 TTTACCGGTCAGGGTCTTAACGAAAATCTGCAT 90536 >seq3045 Length=115554 Score = 118 bits (130), Expect = 7e-22 Identities = 157/216 (73%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| ||| ||||||||||||||| || || | ||| | | |||| Sbjct 10827 AGGACAAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCAGCAAGGGTCCTTCCATCT 10886 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || ||||||||||| || ||||||| | |||||||| | || | ||||||||||| Sbjct 10887 TCTAGTTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCCGGAGGAATTCCCTCCTTGTCC 10946 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | |||||| || || || | ||||| ||| ||| || || | || || Sbjct 10947 TGAATTTTTGCCTTCAC--AT--TGTCGATTGTATCAGAACTCTCCACCTCCAAAGTGAT 11002 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||| ||||| |||||||| |||||||||||||| Sbjct 11003 GGTCTTCCCCGTCAGGGTCTTAACAAAGATCTGCAT 11038 Score = 113 bits (124), Expect = 3e-20 Identities = 167/233 (72%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||||||||||| | ||||| ||||||| || ||||||||||||||| ||||| | Sbjct 11038 TTCCTCCCCTCAGACGAAGGACAAGGTGAAGAGTTGACTCCTTCTGAATGTTGTAGTCAG 11097 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 || | | |||| || || ||||||||||| ||||||| | ||||||||| | | Sbjct 11098 CAAGAGTCCTTCCATCCTCAAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGGG 11157 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGAT-TCATTGG---CC 34924 | | || ||||| || | ||||| || || || | ||||| || || | Sbjct 11158 GGATGCCTTCCTTATCCTGAATTTTCGCCTTAAC--AT--TGTCGATGGTATCGGAACTC 11213 Query 34925 TCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| |||| ||| ||||| ||||| || | ||||| || ||||||||||| Sbjct 11214 TCGACCTCAAGGGTGATGGTTTTTCCAGTCAAAGTCTTAACGAAGATCTGCAT 11266 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || |||| ||| |||||||||||||| || || | ||| | ||| |||| Sbjct 11511 AGGACAAGATGAAGAGTGGATTCCTTCTGAATGTTGTAATCGGCAAGGGTTCGCCCATCT 11570 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||||||||| || |||| || ||||||||| | || | || ||||| || Sbjct 11571 TCCAACTGCTTTCCGGCAAATATCAATCTCTGCTGGTCTGGGGGGATACCTTCCTTATCC 11630 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | || | || | ||| || |||| ||| |||||| Sbjct 11631 TGGATCTTGGCCTTCACGTTATCAATAGTGTCGGACGACTCCACCTCAAGGGTGATGGTC 11690 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||||| || |||||||| || ||||| |||||| Sbjct 11691 TTTCCGGTAAGGGTCTTGACGAAGATTTGCATG 11723 Score = 102 bits (112), Expect = 5e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 34762 CCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTC 34821 ||| ||||| ||||||| || || ||||| ||||| ||||| | || | || | Sbjct 11963 CCTTAGGACGAGGTGAAGAGTTGATTCTTTCTGGATGTTGTAGTCGGCAAGAGTTCGGCC 12022 Query 34822 ATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTT 34881 ||| || |||||||| ||||||||||||| |||||||| || | || | || ||||| Sbjct 12023 ATCCTCAAGTTGCTTGCCGGCGAAGATCAAACGTTGCTGATCCGGGGGGATTCCTTCCTT 12082 Query 34882 GTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTAT 34941 || | || || || ||| | || | ||| || ||| || || | ||| || Sbjct 12083 ATCCTGGATCTTGGCCTTAACGTTGTCGATGGTGTCAGAGGACTCCACCTCGAGGGTGAT 12142 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||| || |||||||| || || ||||| ||||| Sbjct 12143 GGTCTTGCCTGTGAGGGTTTTAACGAAGATTTGCAT 12178 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 |||||||| || || ||||| | ||| | || | || || ||||||||||| |||||| Sbjct 11760 TCCTTCTGGATATTGTAGTCGGCAAGGGTTCGGCCGTCCTCAAGTTGCTTTCCAGCGAAG 11819 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 || || ||||||||||| | || | || |||||||| | || || ||| ||| Sbjct 11820 ATGAGACGTTGCTGGTCGGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCTTTTACGTTG 11879 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | || || ||| || || | ||| || ||||| || || ||||| || || Sbjct 11880 TCAATGGTGTCGGAGGACTCCACCTCGAGGGTGATTGTCTTCCCGGTAAGGGTTTTGACG 11939 Query 34967 AAGATCTGCATG 34978 ||||| |||||| Sbjct 11940 AAGATTTGCATG 11951 >seq26478 Length=75715 Score = 113 bits (124), Expect = 3e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 |||||||| | | || || ||||| | ||| |||||||| || || ||||| | Sbjct 13965 CCTCCCCTGAGACGGAGCACAAGGTGGAGCGTGGATTCCTTCTGGATATTGTAGTCGGCA 13906 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| | || | || || || |||||||||||||| |||| || |||||||| | || Sbjct 13905 AGGGTTCGGCCGTCCTCAAGCTGCTTTCCGGCGAAAATCAAACGCTGCTGGTCGGGGGGG 13846 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||||||||| | || ||| ||||| | || | || | |||||| Sbjct 13845 ATTCCCTCCTTGTCCTGGATCTTTGCCTTGACATTGTCAATGGTATCGGAGCTCTCGACT 13786 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 || | ||| |||||||| ||||| ||||| || || |||||||||||||| Sbjct 13785 TCGAGGGTAATGGTCTTACCCGTTAGGGTTTTCACGAAGATCTGCATGAT 13736 >seq8166 Length=147256 Score = 107 bits (118), Expect = 1e-18 Identities = 157/220 (71%), Gaps = 8/220 (4%) Strand=Plus/Plus Query 34762 CCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTC 34821 ||| | ||| || || | ||| ||||||||| ||||| ||||| | || | || | Sbjct 120232 CCTTAAGACAAGATGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGTGTTCGACC 120291 Query 34822 ATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTT 34881 ||| ||||| ||||| |||||||| || || || |||||||| |||| | |||||||| Sbjct 120292 ATCCTCCAGCTGCTTACCGGCGAAAATGAGACGCTGCTGGTCCGGCGGTATTCCCTCCTT 120351 Query 34882 GTCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGG 34937 ||| | || ||| || || || ||||||| ||| |||||| || | | Sbjct 120352 GTCCTGAATCTTTGCCTTAAC--AT--TATCGATGGTATCAGAACTCTCGACCTCGAGAG 120407 Query 34938 TTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||||||| || || || || || || ||||||||||| Sbjct 120408 TTATGGTCTTCCCGGTAAGCGTTTTCACGAAGATCTGCAT 120447 >seq31175 Length=13598 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||| | ||| ||||| || ||||| ||||| | | | || |||| Sbjct 7456 AGGACCAGGTGGAGGGTTGATTCCTTTTGGATGTTGTAGTCGGCCAACGTACGGCCATCC 7515 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || ||||||||||||||||| || || ||||||| ||| | || | || |||||||| Sbjct 7516 TCGAGTTGCTTTCCGGCGAAAATGAGAAGTTGCTGATCTGGGGGAATTCCTTCCTTGTCC 7575 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | ||| | ||| || |||| ||| |||||| Sbjct 7576 TGGATCTTGGCCTTGACGTTGTCGATGGTATCAGACGACTCAACCTCAAGGGTGATGGTC 7635 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || ||||| || || ||||| ||||| Sbjct 7636 TTGCCAGTTAGGGTTTTAACGAAGATTTGCAT 7667 >seq18711 Length=80062 Score = 98.7 bits (108), Expect = 6e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | |||| |||||| |||||||| || || | | | || |||| Sbjct 41045 AGGACAAGGTGGAGGGTGGACTCCTTTTGAATGTTGTAATCGGCCAATGTACGTCCATCC 40986 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| || ||||| ||||| |||| | ||||||||| | || | ||||||||||| Sbjct 40985 TCCAACTGTTTTCCAGCGAAAATCAACCTTTGCTGGTCGGGAGGGATACCCTCCTTGTCC 40926 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | ||||| || ||| | || | || | ||| || || | ||||||||| Sbjct 40925 TGGATTTTAGCCTTCACGTTGTCAATAGTGTCTGAGCTCTCAACCTCCAATGTTATGGTC 40866 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || | |||||||||||| || ||||| Sbjct 40865 TTTCCTGTTAAGGTCTTTACAAATATTTGCAT 40834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325533040353512