Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrullus_20lanatus_20[genbank_20GCA_5F000238415.1_202011-12-13] 40,248 sequences; 321,046,825 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq18711 89.7 5e-13 seq22339 82.4 7e-11 >seq18711 Length=80062 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 |||||||||| | |||| |||||||| ||||| || ||| | ||| || ||| ||| Sbjct 40130 ACCAAATGTAGGGTTGATTCTTTTTGTATGTTATAATCGGCGAGGGTTCGACCATCCTCG 40071 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 ||||| || || | | || || | ||| || |||||||| || ||||||||||| | Sbjct 40070 AGCTGCTTTCCAGCGAAAATAAGCCTCTGCTGGTCTGGAGGAATTCCTTCTTTATCCTGA 40011 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 ||||| || | | || | |||||| | || || || | || | ||||| Sbjct 40010 ATTTTGGCCTTTACATTGTCAATAGTATCAGAACTTTCAACCTCAAGGGTTATTGTTTTG 39951 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || |||||||| | ||| || ||||| Sbjct 39950 CCGGTGAGAGTTTTCACGAAGATTTGCAT 39922 >seq22339 Length=139203 Score = 82.4 bits (90), Expect = 7e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| ||||| |||||||||||| || ||||| ||| ||||| || || |||| Sbjct 90571 GACTCCTTTTGGATGTTGTAGTCGGCCAACGTACGGCCATCCTCGAGTTGCTTTCCGGCG 90630 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| ||||| || |||||||| || || |||||||| || || || || | Sbjct 90631 AAGATGAGACGTTGCTGATCTGGGGGAATTCCTTCTTTGTCCTGGATCTTGGCCTTTACG 90690 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | ||||| | | ||| || || | || | || || || ||||| || || Sbjct 90691 TTGTCGATGGTATCAGATGACTCGACCTCAAGGGTGATGGTCTTGCCGGTCAGGGTCTTG 90750 Query 132110 ATGAAAATCTGCATG 132124 | |||||| |||||| Sbjct 90751 ACGAAAATTTGCATG 90765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476371416905280