Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrullus_20lanatus_20[genbank_20GCA_5F000238415.1_202011-12-13] 40,248 sequences; 321,046,825 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq21318 113 4e-20 seq3045 82.4 6e-11 >seq21318 Length=12341 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 |||||| ||||| || || |||||||| ||||||||||| || ||||| |||| | Sbjct 4517 AATGCAGATTTTCGTGAAGACATTGACGGGCAAGACCATCACTCTGGAAGTAGAAAGCTC 4458 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 ||| || | | | | ||||| ||| ||| ||||| || || | || ||| || Sbjct 4457 CGACACTATCGACAATGTGAAGGCAAAGATTCAAGACAAGGAGGGAATCCCACCTGACCA 4398 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 || ||||| || | ||| ||||||||| | |||||| | |||| | | |||||||| Sbjct 4397 GCAGAGGCTGATCTTTGCAGGCAAACAACTTGAAGATGGCAGAACTTTAGCTGATTACAA 4338 Query 106439 CATACAAAAAGAATCTACACTACATTTAGT 106468 ||| ||||| ||||| || || ||||| || Sbjct 4337 CATCCAAAAGGAATCAACTCTCCATTTGGT 4308 >seq3045 Length=115554 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||||||||| ||||| | || || |||||||| ||| |||| || | Sbjct 11494 ATGCAAATTTTTGTGAAAACTCTCACCGGAAAGACCATCACCTTGGAGGTTGAGTCTTCA 11435 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | ||| | | ||||| || ||| ||||| ||||| | ||| || ||| Sbjct 11434 GACACAATTGACAACGTGAAGGCCAAGATTCAAGACAAGGAAGGTATTCCCCCAGACCAA 11375 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || || || || | ||| || |||||||| |||||| |||| | | ||||||||| Sbjct 11374 CAGAGACTCATCTTTGCTGGGAAACAATTGGAAGATGGCCGAACTCTTGCAGATTACAAC 11315 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTG 106472 || || || || ||||| || ||| | || ||| Sbjct 11314 ATCCAGAAGGAGTCTACTCTCCATCTTGTCTTG 11282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402132248278784