Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrullus_20lanatus_20[genbank_20GCA_5F000238415.1_202011-12-13] 40,248 sequences; 321,046,825 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq29839 183 4e-40 >seq29839 Length=13537 Score = 183 bits (202), Expect = 4e-40 Identities = 370/541 (68%), Gaps = 10/541 (2%) Strand=Plus/Plus Query 1455734 AACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCAA 1455793 ||||| | ||||| | ||||||| || | || | | || ||||| |||||| | Sbjct 4261 AACCCCGATCGCTTCTGCATGTTCCCAATTCATTATCCTCAAATCTGGGAGATGTACAAG 4320 Query 1455794 AAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTCCA 1455853 |||| |||| |||||||| ||||| |||||||| ||||| ||| ||| ||| Sbjct 4321 AAAG-CCGAAGCCTCCTTCTGGACTGCCGAGGAAGTCGATCTCTCACAAGACCTTCGCCA 4379 Query 1455854 CTGGGTGTCGCTGAGCGAC-GACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTC 1455912 ||||| || || | | | |||||| |||||||||| || ||||| ||||| || | Sbjct 4380 CTGGGAATC-CTTAACTTCTGACGAGAAACATTTCATCACTCATGTCCTTGCCTTCTT-C 4437 Query 1455913 GCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAA 1455972 || || ||||||||||| ||||| || ||||| || || |||||||| |||||| Sbjct 4438 GCTGCTTCTGATGGCATCGTTTTGGAGAATCTCGCCGGACGGTTCATGAAAGAAGTCCAA 4497 Query 1455973 TTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAA 1456032 | | || || | || || || ||||| || |||||||| |||||||| || || Sbjct 4498 GTTGCTGAAGCTAGAGCTTTCTATGGATTCCAAATTGCCATCGAGAACATCCATTCCGAG 4557 Query 1456033 ACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTT 1456092 | ||| || || | || ||||| |||| | | ||||||| | | | || Sbjct 4558 ATGTACAGTCTTCTCCTTGAAACCTATATCAAAAATTCAAACGAGAAGAATCGGTTGTTC 4617 Query 1456093 CGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATC 1456152 || || || || || || || | || | ||| ||||| || |||||| | |||||||| Sbjct 4618 CGTGCTATTGAAACTGTCCCCTGTGTCAAGAAGAAGGCTGATTGGGCGTTAAAGTGGATT 4677 Query 1456153 AACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCC-GCGTCGAGGGCA 1456211 | || | || ||| || |||||||| | | | |||||| | || ||||| | Sbjct 4678 GA-TAGCACGGAATCG----TTCGCCGAGCGTATTTTGGCGTTTGCCTGTGTTGAGGGAA 4732 Query 1456212 TCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCG 1456271 | || ||||| || ||||||||| |||| || ||| | || || || || | ||||| | Sbjct 4733 TTTTCTTCTCAGGTAGTTTCTGCTCCATTTTCTGGTTGAAAAAACGTGGGTTAATGCCTG 4792 Query 1456272 G 1456272 | Sbjct 4793 G 4793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7173929206424176