Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrullus_20lanatus_20[genbank_20GCA_5F000238415.1_202011-12-13] 40,248 sequences; 321,046,825 total letters Query= NC_029046.1 Length=50827 Score E Sequences producing significant alignments: (Bits) Value seq38918 80.6 9e-11 seq16140 80.6 9e-11 >seq38918 Length=2095 Score = 80.6 bits (88), Expect = 9e-11 Identities = 61/72 (85%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209 ||| |||||||||| |||||||||| ||||||||||| || ||| | ||||| |||| Sbjct 344 CGGGGTAGAGCAGCTTGGTAGCTCGCAAGGCTCATAACCTTGAAGTCACGGGTTCAAATC 403 Query 21210 CTGTCTCCGCAA 21221 |||||||||||| Sbjct 404 CTGTCTCCGCAA 415 >seq16140 Length=19587 Score = 80.6 bits (88), Expect = 9e-11 Identities = 61/72 (85%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209 ||| |||||||||| |||||||||| ||||||||||| || ||| | ||||| |||| Sbjct 694 CGGGGTAGAGCAGCTTGGTAGCTCGCAAGGCTCATAACCTTGAAGTCACGGGTTCAAATC 635 Query 21210 CTGTCTCCGCAA 21221 |||||||||||| Sbjct 634 CTGTCTCCGCAA 623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 162447122084464