Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrullus_20lanatus_20[genbank_20GCA_5F000238415.1_202011-12-13] 40,248 sequences; 321,046,825 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq29839 188 7e-43 >seq29839 Length=13537 Score = 188 bits (208), Expect = 7e-43 Identities = 364/532 (68%), Gaps = 9/532 (2%) Strand=Plus/Minus Query 23501 ACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAA 23560 |||| ||||| |||||||||||||| || |||||||| | |||||| || || || | Sbjct 4861 ACAACAAACAAGCAAAATCACAATGAAGCCCTTCATCTCGTGAAATCAACTCGTTTGAGA 4802 Query 23561 ATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGAT-CCG 23619 | |||||||| |||||||| || |||||||| | ||| || || | |||| | | || Sbjct 4801 ACGTTAATCCAGGCATTAACCCACGTTTTTTCAACCAGAAAATGG-AGCAGAAACTACCT 4743 Query 23620 GAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTA 23679 || |||||||| ||||||||| ||||| |||| || ||| | || | | | | Sbjct 4742 GAGAAGAAAATTCCCTCAACACAGGCAAACGCCAAAATACGCTCGGCGAACGATTCCGTG 4683 Query 23680 TAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCA 23739 |||| ||||| ||| | ||||| ||||||| || ||||| | |||||| Sbjct 4682 CTATCA---ATCCACTTTAACGCCCAATCAGCCTTCTTCTTGACACAGGGGACAGTTTCA 4626 Query 23740 ATTGCTTTTAAGAGAAAAGTTTTTTCTTCATT--ATCTGTTATATATGTATCAATTAGTA 23797 || || || | | | || |||| || || | | ||||| || |||| || | Sbjct 4625 ATAGCACGGAACA--ACCGATTCTTCTCGTTTGAATTTTTGATATAGGTTTCAAGGAGAA 4568 Query 23798 AACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAG 23857 ||| ||||| || ||||| || || || || ||||| || || ||||| ||| ||||| Sbjct 4567 GACTGTACATCTCGGAATGGATGTTCTCGATGGCAATTTGGAATCCATAGAAAGCTCTAG 4508 Query 23858 CTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCAT 23917 |||||| | ||| || || || | || | | || | ||| || ||| || |||| Sbjct 4507 CTTCAGCAACTTGGACTTCTTTCATGAACCGTCCGGCGAGATTCTCCAAAACGATGCCAT 4448 Query 23918 CACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATT 23977 || |||||| ||||| ||||| |||| | || |||||| | || |||| | ||| Sbjct 4447 CAGAAGCAGCGAAGAAGGCAAGGACATGAGTGATGAAATGTTTCTCGTCAGAAGTTAAGG 4388 Query 23978 TTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAA 24029 || ||| | || |||| ||| | ||| ||||| || | ||||| || Sbjct 4387 ATTCCCAGTGGCGAAGGTCTTGTGAGAGATCGACTTCCTCGGCAGTCCAGAA 4336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521225639387200