Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20cavaleriei_20[genbank_20GCA_5F002013975.1_202017-03-03] 14,915 sequences; 357,216,162 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq7271 172 1e-37 seq3221 152 1e-31 seq5889 143 6e-29 seq7137 102 2e-16 seq12505 98.7 2e-15 seq13027 86.0 1e-11 >seq7271 Length=339586 Score = 172 bits (190), Expect = 1e-37 Identities = 176/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| |||||||| | || || || || | ||| || || |||||||| |||||||| Sbjct 98393 ATTCCACCTCTTAGACGGAGGACCAGGTGGAGTGTGGACTCCTTCTGAATGTTATAGTCG 98334 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || | || || || |||||||| ||||||||||| ||||| || || || || Sbjct 98333 GCAAGGGTGCGGCCATCCTCAAGTTGTTTGCCAGCAAAAATAAGCCTTTGCTGGTCTGGT 98274 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| || ||||||||||| ||||| ||||| || | ||| ||| ||| Sbjct 98273 GGGATCCCTTCCTTGTCCTGAATCTTGGCTTTGACATTGTCAATGGTGTCGGAGCTTTCC 98214 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || |||||||| ||||| || || |||||||| |||||||| Sbjct 98213 ACCTCAAGGGTGATAGTCTTTCCAGTGAGGGTCTTTACAAAGATCTGCAT 98164 Score = 159 bits (176), Expect = 8e-34 Identities = 156/200 (78%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 |||||||| |||||||| || ||||||| || || | || |||||||| || |||||| Sbjct 98816 GTAGATTCCTTCTGAATGTTGTAGTCAGCAAGGGTACGGCCATCTTCTAGCTGCTTTCCA 98757 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| || |||||||||||||| || || || || || ||||| ||||| || || Sbjct 98756 GCAAAAATCAGTCTCTGTTGATCAGGTGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 98697 Query 104483 ACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539 ||||| || | || || ||| ||| ||||| | || |||||||||||||| || Sbjct 98696 ACATTGTCGATTGTGTCAGAGCT---TTCAACCTCCAAAGTTATAGTCTTACCAGTCAGG 98640 Query 104540 GTTTTTACAAATATCTGCAT 104559 ||||| ||||| |||||||| Sbjct 98639 GTTTTCACAAAAATCTGCAT 98620 Score = 158 bits (174), Expect = 3e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || || || | ||| || | || | || ||||| ||||| |||||||||||| Sbjct 55452 ATACCACCCCTAAGTCGAAGGACCAAGTGGAGGGTTGATTCCTTCTGGATATTATAGTCA 55393 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || | ||| || || || ||||| |||||||| || |||||||| |||||||| Sbjct 55392 GCAAGTGTGCGACCATCCTCGAGCTGTTTACCAGCAAAGATAAGCCTCTGCTGATCAGGT 55333 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| || ||||| ||||| ||||||||||| || | ||| ||| ||| Sbjct 55332 GGGATCCCTTCCTTGTCCTGGATCTTGGCTTTTACATTATCAATGGTGTCGGAGCTTTCA 55273 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || || ||||| || || || ||||| ||||| || ||||| Sbjct 55272 ACCTCAAGGGTTATTGTCTTGCCGGTGAGAGTTTTCACAAAGATTTGCAT 55223 Score = 152 bits (168), Expect = 1e-31 Identities = 164/216 (76%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || | ||| | || || || ||||| || || ||||||| ||||| | ||| || Sbjct 56119 AAGCACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTACGACCATC 56060 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 ||| |||||||| || ||||| |||| ||||||||||||||| || || || || || || Sbjct 56059 TTCAAGTTGTTTGCCGGCAAAGATTAACCTCTGTTGATCAGGTGGGATGCCCTCCTTGTC 56000 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGTGTAAT 104523 ||| ||||| || || ||||| || | || || ||| ||| ||||| | || || Sbjct 55999 CTGGATCTTGGCCTTGACATTGTCGATCGTGTCAGAGCT---TTCAACCTCCAAAGTTAT 55943 Query 104524 AGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||||||||||| || ||||| ||||| |||||||| Sbjct 55942 AGTCTTACCAGTCAGGGTTTTCACAAAAATCTGCAT 55907 Score = 152 bits (168), Expect = 1e-31 Identities = 152/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||||||||| || |||||||| | ||||| || || ||||| || || |||||| Sbjct 56331 GTGGATTCTTTCTGGATGTTATAGTCTGCAAGAGTCCTTCCATCTTCAAGCTGCTTTCCA 56272 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| |||||||| ||||| || || || || || || || ||||| |||||||| Sbjct 56271 GCAAAAATGAGCCTCTGCTGATCTGGTGGGATACCCTCCTTGTCTTGAATTTTTGCTTTC 56212 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | ||| || | ||| ||||| || ||||| || || || || || ||| Sbjct 56211 ACGTTGTCGATGGTGTCAGAACTTTCAACCTCAAGAGTAATTGTTTTTCCGGTGAGCGTT 56152 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 56151 TTCACAAAGATCTGCAT 56135 Score = 150 bits (166), Expect = 4e-31 Identities = 154/200 (77%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||||||||| || |||||||| | ||||| || || ||||| || || |||||| Sbjct 95403 GTGGATTCTTTCTGGATGTTATAGTCTGCAAGAGTCCTTCCATCTTCAAGCTGCTTTCCA 95344 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| |||||||| ||||| || || || || || || || ||||| || ||||| Sbjct 95343 GCAAAAATGAGCCTCTGCTGATCTGGTGGGATACCCTCCTTGTCTTGAATTTTGGCTTTC 95284 Query 104483 ACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539 ||||| || | ||| || ||| ||||||||| || || || || || || || || Sbjct 95283 ACATTGTCAATGGTGTCAGAGCT---TTCTACCTCAAGAGTGATTGTTTTTCCTGTCAGG 95227 Query 104540 GTTTTTACAAATATCTGCAT 104559 ||||| ||||| |||||||| Sbjct 95226 GTTTTCACAAAAATCTGCAT 95207 Score = 149 bits (164), Expect = 1e-30 Identities = 173/231 (75%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || || || | |||||| | ||| | || ||||| ||||| || || ||||| Sbjct 94980 ATACCACCCCTGAGACGAAGTACCAAATGAAGGGTTGATTCCTTCTGGATGTTGTAGTCT 94921 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || | || || || |||||||| |||||||| || ||||| || || || || Sbjct 94920 GCAAGTGTGCGTCCATCCTCAAGTTGTTTGCCAGCAAAGATGAGCCTTTGCTGGTCTGGT 94861 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAG-GTTC 104508 || || ||||| ||||||||||| || ||||| ||||| || | ||| || | || ||| Sbjct 94860 GGGATCCCTTCCTTATCCTGAATTTTGGCTTTGACATTGTCAATGGTGTC-CGAGCTTTC 94802 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || ||||| ||||| ||||| || || |||||||| || ||||| Sbjct 94801 CACCTCAAGGGTAATGGTCTTTCCAGTGAGGGTCTTTACAAAGATTTGCAT 94751 Score = 145 bits (160), Expect = 2e-29 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || || || | || || | ||| | || ||||| ||||| || || ||||| Sbjct 55908 ATGCCACCCCTGAGACGGAGGACCAAATGAAGGGTTGATTCCTTCTGGATGTTGTAGTCT 55849 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || | || || ||||||||||| || ||||| || ||||| || || || || Sbjct 55848 GCAAGTGTGCGTCCATCCTCTAGTTGTTTACCGGCAAAGATGAGCCTTTGCTGGTCTGGT 55789 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| ||||||||||| || ||||| ||||| || | ||| ||| ||| Sbjct 55788 GGGATCCCTTCCTTATCCTGAATTTTGGCTTTGACATTGTCAATGGTGTCGGAGCTTTCC 55729 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || |||||||| ||||| || || |||||||| |||||||| Sbjct 55728 ACCTCCAGGGTGATAGTCTTTCCAGTGAGGGTCTTTACAAAGATCTGCAT 55679 Score = 143 bits (158), Expect = 6e-29 Identities = 150/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || ||||| |||| || || | ||| || || || ||||| || Sbjct 55647 GTTGACTCCTTCTGGATGTTATAATCAGCAAGTGTGCGACCATCCTCGAGCTGTTTACCG 55588 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || |||||||| || || || || || ||||| || ||||||||||| ||||| Sbjct 55587 GCAAAGATAAGCCTCTGCTGGTCTGGTGGGATCCCTTCCTTGTCCTGAATCTTGGCTTTC 55528 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | ||| ||| ||| ||||| || ||||| ||||| ||||| || || Sbjct 55527 ACATTGTCAATGGTGTCGGAGCTTTCCACCTCAAGAGTAATTGTCTTGCCAGTGAGGGTC 55468 Query 104543 TTTACAAATATCTGCAT 104559 |||||||| |||||||| Sbjct 55467 TTTACAAAGATCTGCAT 55451 Score = 141 bits (156), Expect = 2e-28 Identities = 152/200 (76%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||||| |||||| | || ||||| |||||||| ||| Sbjct 95175 GTTGACTCCTTCTGGATGTTGTAGTCAGCTAGAGTACGGCCATCTTCAAGTTGTTTGCCA 95116 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || | ||||| ||||| ||||| || || || || ||||||||||| || || Sbjct 95115 GCAAAGATCAATCTCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGAATCTTAGCCTTA 95056 Query 104483 ACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539 ||||| || | || || ||| ||| ||||| | || ||||| |||||||| || Sbjct 95055 ACATTGTCGATTGTGTCAGAGCT---TTCAACCTCCAAAGTTATAGTTTTACCAGTCAGG 94999 Query 104540 GTTTTTACAAATATCTGCAT 104559 ||||| ||||| |||||||| Sbjct 94998 GTTTTCACAAAAATCTGCAT 94979 Score = 140 bits (154), Expect = 7e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||||||||| ||||| | || || || || ||||| || || || ||| Sbjct 99044 GTGGACTCCTTCTGAATATTGTAGTCGGCGAGGGTCCTTCCATCTTCAAGCTGCTTACCA 98985 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || |||||||| || ||||| || || ||||| || || |||||||| ||||| Sbjct 98984 GCAAAGATAAGCCTCTGCTGGTCAGGCGGGATGCCTTCCTTGTCTTGAATCTTAGCTTTA 98925 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | ||||| | || || |||| ||||| ||||| |||||||| || Sbjct 98924 ACATTGTCAATAGTATCCGAACTCTCAACTTCTAAGGTAATGGTCTTGCCAGTAAGAGTC 98865 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| || ||||| Sbjct 98864 TTAACAAAGATTTGCAT 98848 Score = 136 bits (150), Expect = 9e-27 Identities = 171/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || || || | || || | ||| | || ||||| ||||| || || ||||| Sbjct 98621 ATGCCACCCCTGAGACGGAGGACCAAATGAAGGGTTGATTCCTTCTGGATGTTGTAGTCT 98562 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || | || || ||||||||||| || ||||| || ||||| || || || || Sbjct 98561 GCAAGTGTGCGTCCATCCTCTAGTTGTTTACCGGCAAAGATGAGCCTTTGCTGGTCTGGT 98502 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || || ||||| || |||||||| || ||||| ||||| || | ||| ||| || | || Sbjct 98501 GGGATCCCTTCCTTGTCCTGAATTTTGGCTTTGACATTGTCAATGGTGTCGG-AGCTCTC 98443 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || | || ||||| |||||||| || ||||| ||||||||||||||| Sbjct 98442 AACTTCCAAGGTGATAGTTTTACCAGTCAGGGTTTTCACAAATATCTGCATT 98391 Score = 132 bits (146), Expect = 1e-25 Identities = 150/200 (75%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || |||||||||| ||||| | || || || || ||||| ||| Sbjct 98132 GTGGACTCCTTCTGGATGTTATAGTCAGCAAGAGTGCGGCCATCCTCGAGCTGTTTGCCA 98073 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || ||||| || || || || || || ||||| |||||||| ||||| |||||| Sbjct 98072 GCAAAGATGAGCCTTTGCTGGTCTGGTGGGATCCCTTCCTTATCCTGGATCTTGGCTTTT 98013 Query 104483 ACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539 ||||| || | ||| || ||| ||| ||||| || || || ||||| || || || Sbjct 98012 ACATTATCAATGGTGTCAGAGCT---TTCGACCTCAAGGGTTATGGTCTTGCCGGTGAGA 97956 Query 104540 GTTTTTACAAATATCTGCAT 104559 || || ||||| || ||||| Sbjct 97955 GTCTTCACAAAGATTTGCAT 97936 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || || || ||||| || || || |||| ||||| || || || Sbjct 56574 AGCACAAGATGCAGAGTGGACTCCTTCTGGATGTTGTAATCAGCAAGAGTCCTTCCATCC 56515 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || ||||||||||||||||| || | |||||| || || || || || || || |||||| Sbjct 56514 TCAAGTTGTTTTCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGAATCCCCTCCTTATCC 56455 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 || ||||| || || ||||| || | || || | || ||||| | ||| || || Sbjct 56454 TGGATCTTAGCCTTCACATTGTCAATTGTGTCCGAACTCTCAACCTCCAATGTGATGGTT 56395 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| ||||| || ||||| |||||||| Sbjct 56394 TTCCCAGTGAGTGTCTTCACAAAAATCTGCAT 56363 Score = 131 bits (144), Expect = 4e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || |||||||| ||||| || | || || ||||| ||||| || || || ||| Sbjct 99272 GTGGACTCCTTCTGAATGTTATAATCTGCAAGGGTCCTACCATCTTCAAGCTGCTTGCCA 99213 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| | |||||| || || ||||| || || || ||||| || ||||| || || Sbjct 99212 GCAAAAATCAACCTCTGCTGGTCGGGAGGAATGCCCTCCTTATCTTGGATCTTGGCCTTC 99153 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| |||| ||| || | ||| ||||| | || || ||||| ||||| | || Sbjct 99152 ACATTATCTATGGTGTCTGAACTTTCCACCTCCAAAGTGATGGTCTTCCCAGTCAAAGTC 99093 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 99092 TTCACAAAGATCTGCAT 99076 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || || || ||||| || || || |||| ||||| || || || Sbjct 95646 AGCACAAGATGCAGAGTGGACTCCTTCTGGATGTTGTAATCAGCAAGAGTCCTTCCATCC 95587 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || ||||| ||||||||||| || | |||||| || || || || || || || |||||| Sbjct 95586 TCAAGTTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCCGGTGGAATCCCCTCCTTATCC 95527 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 || ||||| || || ||||| || | || || | || ||||| | ||| || || Sbjct 95526 TGGATCTTAGCCTTAACATTGTCAATTGTGTCCGAACTCTCAACCTCCAATGTGATGGTT 95467 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| ||||| || ||||| |||||||| Sbjct 95466 TTCCCAGTGAGTGTCTTCACAAAAATCTGCAT 95435 >seq3221 Length=646307 Score = 152 bits (168), Expect = 1e-31 Identities = 163/213 (77%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || || || |||||||| ||||| |||| || ||| | || || Sbjct 290141 AGCACAAGATGGAGGGTGGACTCCTTCTGAATGTTATAATCAGCTAAAGTACGGCCATCC 290200 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || || || |||||||| || |||||||| ||||| || || || ||||| || ||| Sbjct 290201 TCAAGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGATCTGGTGGAATCCCTTCCTTGTCC 290260 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGT 104526 ||||||||||| || ||||| || | ||||| || | || ||||| || |||||||| Sbjct 290261 TGAATCTTTGCCTTAACATTATCAATAGTATC-TGAGCTCTCCACCTCCAGAGTAATAGT 290319 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| ||||| | || || |||||||||||||| Sbjct 290320 CTTCCCAGTCAAGGTCTTGACAAATATCTGCAT 290352 Score = 149 bits (164), Expect = 1e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || || || || ||||| ||||| |||| || ||| | || || Sbjct 211404 AGGACAAGATGGAGGGTGGACTCCTTTTGAATGTTATAATCAGCTAAAGTACGGCCATCC 211463 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || || || |||||||| || |||||||| |||||||| || || ||||| |||||| Sbjct 211464 TCAAGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGATCAGGTGGAATCCCTTCCTTATCC 211523 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 |||||||| || || ||||| || | |||||| | || ||||| || ||||| || Sbjct 211524 TGAATCTTAGCCTTGACATTGTCAATGGTATCAGAACTCTCCACCTCCAGGGTAATTGTT 211583 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || |||||||| || || || || |||||||| Sbjct 211584 TTCCCAGTAAGAGTCTTGACGAAAATCTGCAT 211615 Score = 140 bits (154), Expect = 7e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || || || || || || ||||| |||| || || | ||||| Sbjct 219499 AGGACAAGATGGAGGGTGGACTCCTTTTGGATGTTATAATCAGCAAGGGTACGGCCGTCC 219558 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 ||||| || || ||||| || || |||||||| ||||| || || || ||||| |||||| Sbjct 219559 TCTAGCTGCTTCCCAGCGAAGATGAGCCTCTGCTGATCTGGTGGAATCCCTTCCTTATCC 219618 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 ||||||||||| || ||||| || | ||||| | || ||||| || ||||||||| Sbjct 219619 TGAATCTTTGCCTTGACATTATCAATTGTATCAGAACTCTCCACCTCCAGAGTAATAGTC 219678 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| | || || ||||| || ||||| Sbjct 219679 TTCCCAGTCAAAGTCTTGACAAAAATTTGCAT 219710 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || ||||| || || || ||||| |||| || || | || || Sbjct 261135 AGGACGAGATGGAGGGTGGATTCCTTTTGGATGTTATAATCAGCAAGGGTACGGCCATCC 261194 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || || || ||||| || || |||||||| ||||| || || || ||||| |||||| Sbjct 261195 TCAAGCTGCTTCCCAGCGAAGATAAGCCTCTGCTGATCTGGTGGAATCCCTTCCTTATCC 261254 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 ||||||||||| || ||||| || | ||||| | || ||||| || ||||||||| Sbjct 261255 TGAATCTTTGCCTTGACATTATCAATTGTATCAGAACTCTCCACCTCCAGAGTAATAGTC 261314 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| | || || ||||| || ||||| Sbjct 261315 TTCCCAGTCAAAGTCTTGACAAAAATTTGCAT 261346 Score = 131 bits (144), Expect = 4e-25 Identities = 171/234 (73%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| || | ||||| || || ||||| || || |||||||| ||||| || || || Sbjct 211842 ATTCCACCACGAAGCCTGAGGACAAGATGCAAAGTGGATTCTTTTTGAATGTTGTAATCG 211901 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | | ||| | |||||||| ||||| || || ||||| || || | ||| || || || Sbjct 211902 GCCAAAGTGCGGCCGTCTTCGAGTTGCTTCCCTGCAAAGATGAGACGCTGCTGGTCCGGC 211961 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || ||||| || || ||||| ||||| || || || || || | || ||| || | || Sbjct 211962 GGAATTCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATTGTGTCGG-AGCTCTC 212020 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 || || || || || ||||| || || || ||||| |||||||||||||| || Sbjct 212021 CACTTCGAGGGTGATTGTCTTGCCGGTGAGGGTTTTCACAAATATCTGCATCTT 212074 Score = 131 bits (144), Expect = 4e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || |||||||| ||||||||||||| | || | |||||||| | |||||||||| Sbjct 261378 GTTGACTCTTTCTGGATATTATAGTCAGCCAACGTACGGCCGTCTTCCAATTGTTTTCCA 261437 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || | || |||||||| || || || || || || || || ||||| || || Sbjct 261438 GCAAAGATCAATCTTTGTTGATCTGGTGGGATCCCCTCCTTGTCTTGGATCTTGGCCTTG 261497 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | ||||| | || ||||| || || || ||||| ||||| || ||| Sbjct 261498 ACATTATCAATCGTATCTGAACTCTCCACCTCGAGAGTGATCGTCTTCCCAGTTAGGGTT 261557 Query 104543 TTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 261558 TTGACGAAGATCTGCAT 261574 Score = 116 bits (128), Expect = 9e-21 Identities = 166/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || || || | || || ||||| | || || || ||||| || ||||| || Sbjct 290351 ATACCACCCCTCAGGCGCAGAACCAGATGAAGGGTCGACTCCTTCTGGATGTTATAATCC 290410 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | ||||| || || || || || ||||| ||||| || || | | ||| ||||| || Sbjct 290411 GCAAGAGTCCTTCCATCCTCAAGCTGTTTGCCAGCGAAGATCAAACGCTGCTGATCCGGT 290470 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || |||||||| ||||| || || ||||| || ||||| || | || || || | || Sbjct 290471 GGAATTCCTTCCTTATCTTGGATTTTTGCCTTGACATTGTCAATTGTGTCTG-AGCTCTC 290529 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || | ||||| || || |||||||| || || |||||||||||||| Sbjct 290530 AACTTCCAAAGTAATTGTTTTCCCAGTAAGGGTCTTAACAAATATCTGCAT 290580 Score = 104 bits (114), Expect = 5e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || ||||| | || || || ||||| || || || || | | || | ||||| Sbjct 291280 AAGGACAAGATGAAGGGTTGACTCCTTCTGGATGTTGTAATCGGCCAAGGTGCGGCCGTC 291339 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || ||||||||||| || |||||||| || || || || ||||| || || || Sbjct 291340 CTCGAGCTGCTTTCCAGCAAAGATAAGCCTCTGCTGGTCCGGCGGAATTCCCTCCTTGTC 291399 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525 || ||||| || ||||| || || | || || | || | || || || || ||||||| Sbjct 291400 TTGGATCTTGGCCTTTACGTTGTCGATAGTGTC-CGAGCTCTCGACTTCGAGAGTAATAG 291458 Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 | || || || | ||||| || || |||||||| Sbjct 291459 TTTTGCCGGTCAAGGTTTTCACGAAGATCTGCAT 291492 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || || || | ||| || || || | || || ||||||||||| || || || Sbjct 290579 ATGCCTCCCCTGAGACGAAGAACAAGGTGGAGAGTTGACTCTTTCTGAATGTTGTAATCG 290638 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | | || | || ||||| | || || || || || || | || || || || || Sbjct 290639 GCCAAGGTGCGGCCATCTTCCAACTGCTTACCGGCGAAGATCAATCTTTGCTGGTCCGGC 290698 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || ||||| ||||| ||||| || || || || || | ||||| | || Sbjct 290699 GGGATCCCCTCTTTGTCCTGGATCTTGGCCTTGACGTTATCAATCGTATCCGAACTCTCC 290758 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || || ||||| ||||| || ||||| || || |||||||| Sbjct 290759 ACCTCCAGAGTGATCGTCTTCCCAGTTAGGGTTTTGACGAAGATCTGCAT 290808 >seq5889 Length=513596 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || || || |||||||| || || |||| ||||| | ||||| Sbjct 198013 AGGACGAGATGGAGAGTGGACTCCTTCTGAATGTTGTAATCAGCAAGAGTACGGCCGTCC 197954 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || || || ||||| || || |||||||| |||||||| || || ||||| || ||| Sbjct 197953 TCAAGCTGCTTCCCAGCGAAGATGAGCCTCTGCTGATCAGGTGGGATCCCTTCCTTGTCC 197894 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 |||||||| || || ||||| || | |||||| | || ||||| || ||||| ||| Sbjct 197893 TGAATCTTGGCCTTGACATTGTCAATGGTATCCGAACTCTCCACCTCCAGGGTAATCGTC 197834 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || | ||| || ||||| |||||||| Sbjct 197833 TTCCCGGTCAATGTCTTGACAAAAATCTGCAT 197802 Score = 122 bits (134), Expect = 2e-22 Identities = 167/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || ||||| | || | ||| || || || | ||| ||||| ||||| || || || ||| Sbjct 197347 ATGCCCCCACGGAGACGAAGCACGAGGTGAAGTGTTGATTCCTTCTGGATGTTGTAATCA 197288 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | | || | ||||| || ||||| ||||| || || || |||||||| || || || Sbjct 197287 GCCAAGGTGCGGCCGTCCTCGAGTTGCTTTCCTGCGAAGATCAGCCTCTGCTGGTCCGGC 197228 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || || ||||| || ||||| ||||| || || || || || | || ||| || | || Sbjct 197227 GGAATCCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCGG-AGCTCTC 197169 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || ||||| ||||| || || || ||||| || ||||||||||| Sbjct 197168 AACTTCGAGAGTAATGGTCTTTCCCGTTAGGGTTTTGACGAATATCTGCAT 197118 Score = 122 bits (134), Expect = 2e-22 Identities = 167/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || ||||| | || | ||| || || || | || ||||| ||||| ||||| || ||| Sbjct 197575 ATGCCCCCACGGAGACGAAGCACGAGGTGAAGAGTTGATTCCTTCTGGATATTGTAATCA 197516 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | | || | ||||| || ||||| ||||| || || || |||||||| || || || Sbjct 197515 GCCAAGGTGCGGCCGTCCTCGAGTTGCTTTCCTGCGAAGATCAGCCTCTGCTGGTCCGGC 197456 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || || ||||| || ||||| ||||| || || || || || | || ||| || | || Sbjct 197455 GGAATCCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCGG-AGCTCTC 197397 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || ||||| ||||| || || || ||||| || ||||||||||| Sbjct 197396 AACTTCGAGAGTAATGGTCTTTCCCGTTAGGGTTTTGACGAATATCTGCAT 197346 Score = 105 bits (116), Expect = 2e-17 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| | || ||||| |||||||| || || || | || || || || || || Sbjct 197782 ACCAGATGAAGAGTTGATTCCTTCTGAATGTTGTAATCCGCGAGCGTCCTTCCATCCTCC 197723 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 || || || ||||| || || | | ||| || || || || || ||||| || ||||| Sbjct 197722 AGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCCGGCGGAATCCCTTCCTTGTCCTGG 197663 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTT 104529 ||||| || || || || || | || ||| || | || ||||| || ||||| ||||| Sbjct 197662 ATCTTGGCCTTGACGTTGTCAATCGTGTCGG-AGCTCTCGACCTCGAGGGTAATCGTCTT 197604 Query 104530 ACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || ||||| || ||||||||||| Sbjct 197603 TCCCGTTAGGGTTTTGACGAATATCTGCAT 197574 >seq7137 Length=1378580 Score = 102 bits (112), Expect = 2e-16 Identities = 106/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390 |||| || || ||||| || || | || | ||| || || |||||||| ||||| |||| Sbjct 502517 TTCCTCCCCTGAGCCTCAGGACCAAGTGAAGTGTTGACTCCTTCTGAATGTTATAATCAG 502458 Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450 ||||| | || ||||| | |||||| ||||||||||| | ||||| ||||| |||| Sbjct 502457 CAAGAGTACGGCCATCTTCCAATTGTTTCCCAGCAAAAATCAATCTCTGCTGATCTGGAG 502398 Query 104451 GTATTCCTTCTTTATCCTG 104469 | || ||||| || ||||| Sbjct 502397 GAATGCCTTCCTTGTCCTG 502379 >seq12505 Length=74167 Score = 98.7 bits (108), Expect = 2e-15 Identities = 105/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390 |||| || || ||||| || || | || | || || || || ||||| ||||| || | Sbjct 8000 TTCCTCCCCTGAGCCTCAGGACCAAGTGAAGCGTCGACTCCTTTTGAATGTTATAATCTG 7941 Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450 || ||||| || ||||| | |||||| ||||||||||| || ||||| ||||| |||| Sbjct 7940 CAAGCGTTCTGCCATCTTCCAATTGTTTACCAGCAAAAATCAGTCTCTGCTGATCCGGAG 7881 Query 104451 GTATTCCTTCTTTATCCTG 104469 | || ||||| || ||||| Sbjct 7880 GAATGCCTTCCTTGTCCTG 7862 >seq13027 Length=873722 Score = 86.0 bits (94), Expect = 1e-11 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 104456 CCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCT 104515 || || || || || ||||| || || ||||| || | ||| ||||| | ||| ||||| Sbjct 413203 CCCTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATGGTGTCGCTGGATTCGACCTCG 413144 Query 104516 AGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 |||||||| ||||| || || || ||||| || || ||||||||||| Sbjct 413143 AGTGTAATGGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATTTT 413097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151178369564820