Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Citrus_20cavaleriei_20[genbank_20GCA_5F002013975.1_202017-03-03]
14,915 sequences; 357,216,162 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq5889 152 5e-32
seq3221 125 6e-24
seq7271 118 1e-21
seq13804 96.9 3e-15
seq12505 89.7 5e-13
seq6246 86.0 6e-12
seq1669 86.0 6e-12
seq13803 82.4 7e-11
>seq5889
Length=513596
Score = 152 bits (168), Expect = 5e-32
Identities = 175/233 (75%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| ||||| ||||| | | ||| ||||| ||||| ||||||||||||||||| ||||||
Sbjct 196891 ATGCCTCCACGGAGACGAAGCACAAGATGAAGCGTCGATTCCTTTTGGATATTGTAATCG 196832
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| || || | |||||||| ||| | |||| || |||||||||||
Sbjct 196831 GCCAAGGTGCGGCCGTCTTCGAGCTGTTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGA 196772
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| || ||||| || ||||| || || |||| || | || | ||||||||| |||
Sbjct 196771 GGGATTCCTTCCTTGTCTTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCGGAGCTCTC 196713
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATCG 45342
|||||||||||||| || ||||||||||| ||||| || || || |||||||
Sbjct 196712 GACTTCGAGAGTAATGGTCTTGCCGGTTAGGGTTTTCACGAAGATCTGCATCG 196660
Score = 122 bits (134), Expect = 8e-23
Identities = 167/231 (72%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | | ||| || || || ||||||||||| ||||| || |||||
Sbjct 197119 ATGCCCCCACGGAGACGAAGCACGAGGTGAAGTGTTGATTCCTTCTGGATGTTGTAATCA 197060
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| || || | ||| ||||||||| | |||| | ||||||||||||
Sbjct 197059 GCCAAGGTGCGGCCGTCCTCGAGTTGCTTTCCTGCGAAGATCAGCCTCTGCTGGTCCGGC 197000
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
||||| ||||| || || || || || |||| || | || | |||||||| |||
Sbjct 196999 GGAATCCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATCGTGTCGGAGCTCTC 196941
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||||||||||| || ||||||||||| ||||| || || || |||||
Sbjct 196940 AACTTCGAGAGTAATGGTCTTGCCGGTTAGGGTTTTCACGAAGATCTGCAT 196890
Score = 122 bits (134), Expect = 8e-23
Identities = 157/214 (73%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 45128 CAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATC 45187
|||||| ||||| || ||||||||||| || || || ||||| || || | |||
Sbjct 197786 CAACACCAGATGAAGAGTTGATTCCTTCTGAATGTTGTAATCCGCGAGCGTCCTTCCATC 197727
Query 45188 GTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATC 45247
|||| || || || ||| | ||||| || ||||||||||||||||| ||||| || ||
Sbjct 197726 CTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCCGGCGGAATCCCTTCCTTGTC 197667
Query 45248 TTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCG 45306
|| || || |||| || | || | |||||||| |||||| ||||| |||| ||
Sbjct 197666 CTGGATCTTGGCCTTGA-CGTTGTCAATCGTGTCGGAGCTCTCGACCTCGAGGGTAATCG 197608
Query 45307 TTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
| || || ||||| ||||| || || || |||||
Sbjct 197607 TCTTTCCCGTTAGGGTTTTGACGAATATCTGCAT 197574
Score = 116 bits (128), Expect = 3e-21
Identities = 166/231 (72%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | | ||| || || || ||||||||||| |||||||| |||||
Sbjct 197575 ATGCCCCCACGGAGACGAAGCACGAGGTGAAGAGTTGATTCCTTCTGGATATTGTAATCA 197516
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| || || | ||| ||||||||| | |||| | ||||||||||||
Sbjct 197515 GCCAAGGTGCGGCCGTCCTCGAGTTGCTTTCCTGCGAAGATCAGCCTCTGCTGGTCCGGC 197456
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
||||| ||||| || || || || || |||| || | || | |||||||| |||
Sbjct 197455 GGAATCCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATCGTGTCGGAGCTCTC 197397
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||||||||||| || || || ||||| ||||| || || || |||||
Sbjct 197396 AACTTCGAGAGTAATGGTCTTTCCCGTTAGGGTTTTGACGAATATCTGCAT 197346
Score = 113 bits (124), Expect = 4e-20
Identities = 165/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | | ||| || || || ||||||||||| ||||| || |||||
Sbjct 197347 ATGCCCCCACGGAGACGAAGCACGAGGTGAAGTGTTGATTCCTTCTGGATGTTGTAATCA 197288
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| || || | ||| ||||||||| | |||| | ||||||||||||
Sbjct 197287 GCCAAGGTGCGGCCGTCCTCGAGTTGCTTTCCTGCGAAGATCAGCCTCTGCTGGTCCGGC 197228
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
||||| ||||| || || || || || |||| || | || | |||||||| |||
Sbjct 197227 GGAATCCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATCGTGTCGGAGCTCTC 197169
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||||||||||| || || || ||||| ||||| || || || |||||
Sbjct 197168 AACTTCGAGAGTAATGGTCTTTCCCGTTAGGGTTTTGACGAATATCTGCAT 197118
>seq3221
Length=646307
Score = 125 bits (138), Expect = 6e-24
Identities = 168/231 (73%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || |||||||| | ||| || || |||||||| ||||| ||||| || ||||||
Sbjct 220164 ATGCCGCCACGGAGCCTGAGCACGAGGTGGAGCGTTGACTCCTTCTGGATGTTGTAATCG 220223
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| ||| || | ||| ||||| ||| | |||| || ||||| |||||
Sbjct 220224 GCCAAGGTGCGGCCATCTTCGAGTTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCGGA 220283
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| || || || || || || || || || | || | || | |||||| || |||
Sbjct 220284 GGGATCCCCTCCTTGTCCTGGATCTTGGCCTTCA-CGTTGTCGATGGTGTCAGAGCTCTC 220342
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||||||||| | ||||||||||||||| ||||| ||||| || |||||
Sbjct 220343 CACTTCGAGAGTGATCGTTTTGCCGGTTAGGGTTTTCACAAAGATCTGCAT 220393
Score = 116 bits (128), Expect = 3e-21
Identities = 160/221 (72%), Gaps = 2/221 (1%)
Strand=Plus/Plus
Query 45121 GGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTT 45180
||||||| | ||| || || |||||||| ||||| ||||| || |||||| | |||
Sbjct 261811 GGAGCCTGAGCACGAGGTGGAGCGTTGACTCCTTCTGGATGTTGTAATCGGCCAAGGTGC 261870
Query 45181 TAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTT 45240
||| || | ||| ||||| ||| | |||| || ||||| ||||| || || || |
Sbjct 261871 GGCCATCTTCGAGTTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCGGAGGGATCCCCT 261930
Query 45241 CTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGA 45299
| || || || || || |||| || | || | ||||| || ||| |||||||||
Sbjct 261931 CCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATTGTGTCAGAGCTCTCCACTTCGAGA 261989
Query 45300 GTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| | ||||||||||||||| ||||| || || || |||||
Sbjct 261990 GTGATCGTTTTGCCGGTTAGGGTTTTCACGAAGATCTGCAT 262030
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| ||||||||||| | | || ||||| || ||||| ||||| || || || ||||||
Sbjct 291035 ATGCCTCCGCGGAGACGAAGGACAAGATGGAGGGTTGACTCCTTCTGTATGTTGTAATCG 291094
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| || || | || ||||| ||| | || | | |||||||||||
Sbjct 291095 GCCAAGGTGCGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATAAGCCTCTGCTGGTCCGGG 291154
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
|| || || || || |||||||| || |||| || | ||||||||| ||||
Sbjct 291155 GGGATTCCCTCCTTGTCTTGAATCTTCGCCTTGACATTGTCGATGGTGTCGGAGCTCTCG 291214
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||||||||||| |||||||| || || ||||| || || || |||||
Sbjct 291215 ACTTCGAGAGTAATAGTTTTGCCAGTCAGGGTTTTCACGAAGATCTGCAT 291264
Score = 104 bits (114), Expect = 2e-17
Identities = 163/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || |||||||| | || ||||| || ||||| ||||| |||||||| |||||
Sbjct 290807 ATACCACCACGGAGCCTGAGGACGAGATGAAGGGTTGACTCCTTCTGGATATTGTAATCA 290866
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| || |||| ||| || || || | |||| | |||||||||||
Sbjct 290867 GCCAAGGTGCGGCCGTCTTCCAGTTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCCGGG 290926
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| || || || || |||||||| || |||| || | || | ||||| || |||
Sbjct 290927 GGGATTCCCTCCTTGTCTTGAATCTTCGCCTTGA-CGTTATCGATCGTGTCTGAGCTCTC 290985
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| ||||| || | ||| || |||||||| ||||| ||||| || |||||
Sbjct 290986 AACCTCGAGGGTTATCGTCTTCCCGGTTAGGGTTTTGACAAAGATCTGCAT 291036
Score = 104 bits (114), Expect = 2e-17
Identities = 163/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| ||||||||||| | | || ||||| || ||||| ||||| ||||| || ||||||
Sbjct 291263 ATGCCTCCGCGGAGACGAAGGACAAGATGAAGGGTTGACTCCTTCTGGATGTTGTAATCG 291322
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| || || | || ||||| || | || | | ||||||||||||
Sbjct 291323 GCCAAGGTGCGGCCGTCCTCGAGCTGCTTTCCAGCAAAGATAAGCCTCTGCTGGTCCGGC 291382
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
||||| || || || ||||| || || || | || | || | ||||| || |||
Sbjct 291383 GGAATTCCCTCCTTGTCTTGGATCTTGGCCTTTA-CGTTGTCGATAGTGTCCGAGCTCTC 291441
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|||||||||||||| ||||||||||| | ||||| || || || |||||
Sbjct 291442 GACTTCGAGAGTAATAGTTTTGCCGGTCAAGGTTTTCACGAAGATCTGCAT 291492
Score = 100 bits (110), Expect = 3e-16
Identities = 163/232 (70%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
||||| || || ||||| | || ||||||| || ||||| ||||| || || ||||||
Sbjct 211842 ATTCCACCACGAAGCCTGAGGACAAGATGCAAAGTGGATTCTTTTTGAATGTTGTAATCG 211901
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| || || || | ||| || ||||| | || | || ||||||||||||
Sbjct 211902 GCCAAAGTGCGGCCGTCTTCGAGTTGCTTCCCTGCAAAGATGAGACGCTGCTGGTCCGGC 211961
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
||||| || || || || || || || |||| || | || | |||||||| |||
Sbjct 211962 GGAATTCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATTGTGTCGGAGCTCTC 212020
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|||||||| || | || |||||||| || ||||| ||||| || ||||||
Sbjct 212021 CACTTCGAGGGTGATTGTCTTGCCGGTGAGGGTTTTCACAAATATCTGCATC 212072
Score = 95.1 bits (104), Expect = 1e-14
Identities = 161/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| ||||| | ||| | | || || || || ||||| || || || || || ||||||
Sbjct 290579 ATGCCTCCCCTGAGACGAAGAACAAGGTGGAGAGTTGACTCTTTCTGAATGTTGTAATCG 290638
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| ||| ||||| || || || ||| | ||||||| |||||||||||||
Sbjct 290639 GCCAAGGTGCGGCCATCTTCCAACTGCTTACCGGCGAAGATCAATCTTTGCTGGTCCGGC 290698
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| || || ||||| || || || || |||| || | || | || || ||| |||
Sbjct 290699 GGGATCCCCTCTTTGTCCTGGATCTTGGCCTTGA-CGTTATCAATCGTATCCGAACTCTC 290757
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || ||||| | ||| || || ||||| ||||| || || || |||||
Sbjct 290758 CACCTCCAGAGTGATCGTCTTCCCAGTTAGGGTTTTGACGAAGATCTGCAT 290808
Score = 89.7 bits (98), Expect = 5e-13
Identities = 160/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATC- 45169
|| ||||| ||||| | | || || || || ||||| || || ||||| ||||| ||
Sbjct 219709 ATGCCTCCACGGAGACGGAGGACAAGGTGAAGAGTTGACTCTTTCTGGATGTTATAGTCA 219768
Query 45170 GCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGG 45229
|| ||| | || |||||||||||||| || | ||||||| ||| || || ||
Sbjct 219769 GCCAACG-TGCGGCCGTCTTCCAATTGTTTTCCGGCAAAGATCAATCTTTGTTGATCTGG 219827
Query 45230 CGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTC 45289
|| || ||||| || ||||| || || |||| || | || || ||| |||
Sbjct 219828 TGGGATCCCTTCCTTGTCTTGGATCTTGGCCTTGACATTATCAATCGTATCTGAACTCTC 219887
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| |||||||| | ||| || || ||||| ||||| || || || |||||
Sbjct 219888 CACCTCGAGAGTGATCGTCTTCCCAGTTAGGGTTTTGACGAAGATCTGCAT 219938
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
|| || ||||| | | || ||||| || || |||||||||||||| ||||||||
Sbjct 261120 CCACCACGGAGACGGAGGACGAGATGGAGGGTGGATTCCTTTTGGATGTTATAATCAGCA 261179
Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233
| ||| ||| || | || || || ||| | || | | ||||| || || |||
Sbjct 261180 AGGGTACGGCCATCCTCAAGCTGCTTCCCAGCGAAGATAAGCCTCTGCTGATCTGGTGGA 261239
Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293
|| ||||| ||||| ||||| ||| |||| || | || || ||| ||| ||
Sbjct 261240 ATCCCTTCCTTATCCTGAATCTTTGCCTTGACATTATCAATTGTATCAGAACTCTCCACC 261299
Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| ||||||| || || || || | ||| || ||||||||||||||
Sbjct 261300 TCCAGAGTAATAGTCTTCCCAGTCAAAGTCTTGACAAAAATTTGCAT 261346
Score = 86.0 bits (94), Expect = 6e-12
Identities = 159/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATC- 45169
|| ||||| || || | | || || || || ||||| || || ||||||||||| ||
Sbjct 261345 ATGCCTCCACGAAGACGGAGGACAAGGTGAAGAGTTGACTCTTTCTGGATATTATAGTCA 261404
Query 45170 GCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGG 45229
|| ||| | || |||||||||||||| || | ||||||| ||| || || ||
Sbjct 261405 GCCAACG-TACGGCCGTCTTCCAATTGTTTTCCAGCAAAGATCAATCTTTGTTGATCTGG 261463
Query 45230 CGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTC 45289
|| || || || || ||||| || || |||| || | || || ||| |||
Sbjct 261464 TGGGATCCCCTCCTTGTCTTGGATCTTGGCCTTGACATTATCAATCGTATCTGAACTCTC 261523
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| |||||||| | ||| || || ||||| ||||| || || || |||||
Sbjct 261524 CACCTCGAGAGTGATCGTCTTCCCAGTTAGGGTTTTGACGAAGATCTGCAT 261574
>seq7271
Length=339586
Score = 118 bits (130), Expect = 1e-21
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|||||||| || || |||||||| | |||||| || |||||||| || || || |||||
Sbjct 99533 ATTCCTCCACGCAGTCTCAACACCAAATGCAGTGTGGATTCCTTCTGAATGTTGTAATCT 99474
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| | ||| || | || || ||||| | ||||| | |||||||| ||
Sbjct 99473 GCAAGGGTCCTCCCATCTTCAAGCTGCTTGCCTGCAAAAATCAACCTCTGCTGGTCTGGT 99414
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
|||||||| || |||||||| || || || | || | ||||| ||| |||
Sbjct 99413 GGAATGCCCTCCTTATCTTGGATCTTGGCCTTCACATTATCAATCGTGTCCGAACTCTCT 99354
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || ||||| | ||||| || || ||||| || ||||||||||||||
Sbjct 99353 ACCTCCAGAGTGATTGTTTTTCCAGTGAGAGTCTTCACAAAAATTTGCAT 99304
Score = 82.4 bits (90), Expect = 7e-11
Identities = 143/206 (69%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAG--AATCGTCCAAT 45194
||| || ||||||||||| ||||| || || | ||| || | | ||| || | |
Sbjct 94954 ATGAAGGGTTGATTCCTTCTGGATGTTGTAGT--CTGCAAGTGTGCGTCCATCCTCAAGT 94897
Query 45195 TGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATT 45254
||||| || || | || | | ||||||||| || || || ||||| ||||| ||||||
Sbjct 94896 TGTTTGCCAGCAAAGATGAGCCTTTGCTGGTCTGGTGGGATCCCTTCCTTATCCTGAATT 94837
Query 45255 TTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCG 45314
|| ||||| || | |||||| || || || || || |||| || || ||
Sbjct 94836 TTGGCTTTGACATTGTCAATGGTGTCCGAGCTTTCCACCTCAAGGGTAATGGTCTTTCCA 94777
Query 45315 GTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || |||||||| ||||||||
Sbjct 94776 GTGAGGGTCTTTACAAAGATTTGCAT 94751
Score = 82.4 bits (90), Expect = 7e-11
Identities = 143/206 (69%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAG--AATCGTCCAAT 45194
||| || ||||||||||| ||||| || || | ||| || | | ||| || | |
Sbjct 98595 ATGAAGGGTTGATTCCTTCTGGATGTTGTAGT--CTGCAAGTGTGCGTCCATCCTCTAGT 98538
Query 45195 TGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATT 45254
||||| || || | || | | ||||||||| || || || ||||| || || ||||||
Sbjct 98537 TGTTTACCGGCAAAGATGAGCCTTTGCTGGTCTGGTGGGATCCCTTCCTTGTCCTGAATT 98478
Query 45255 TTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCG 45314
|| ||||| || | ||||||||| ||| ||||| | || | ||||| ||
Sbjct 98477 TTGGCTTTGACATTGTCAATGGTGTCGGAGCTCTCAACTTCCAAGGTGATAGTTTTACCA 98418
Query 45315 GTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || ||||| ||||| || |||||
Sbjct 98417 GTCAGGGTTTTCACAAATATCTGCAT 98392
>seq13804
Length=830140
Score = 96.9 bits (106), Expect = 3e-15
Identities = 162/232 (70%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || |||||||| | | || || || || || || ||||| ||||| || |||||
Sbjct 395815 ATGCCGCCGCGGAGACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCC 395756
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| || || | || ||||| ||| | |||| || |||||||||||
Sbjct 395755 GCCAAGGTGCGCCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGCCGCTGCTGGTCCGGT 395696
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
||||| ||||| || || || || || |||| || | || | |||||||| |||
Sbjct 395695 GGAATCCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATCGTGTCGGAGCTCTC 395637
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| |||||||| | || |||||||| | |||||| ||||| || ||||||
Sbjct 395636 CACCTCGAGAGTGATGGTCTTGCCGGTCAAAGTTTTCACAAAGATCTGCATC 395585
Score = 95.1 bits (104), Expect = 1e-14
Identities = 161/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|||||||| | || | |||||| || || ||||| |||||||| ||||| |||||||||
Sbjct 396043 ATTCCTCCCCTCAGGCGCAACACAAGGTGGAGCGTGGATTCCTTCTGGATGTTATAATCG 395984
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| || |||| || || || ||| | || | | |||||||||||
Sbjct 395983 GCCAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGGTCCGGG 395924
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| || ||||| || || || || || || | || | || | ||||||||| |||
Sbjct 395923 GGGATCCCTTCCTTGTCCTGGATCTTCGCCTTCA-CGTTGTCGATGGTGTCGGAGCTCTC 395865
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || | ||| || ||||| ||||| || || || || |||||
Sbjct 395864 CACCTCCAGGGTGATCGTCTTCCCGGTCAGAGTCTTGACGAAGATCTGCAT 395814
>seq12505
Length=74167
Score = 89.7 bits (98), Expect = 5e-13
Identities = 103/139 (74%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 45112 TTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGC 45171
||||||| | |||||||| || | || ||||| || |||||||| || ||||||||
Sbjct 8000 TTCCTCCCCTGAGCCTCAGGACCAAGTGAAGCGTCGACTCCTTTTGAATGTTATAATCTG 7941
Query 45172 TGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCG 45231
| ||| | ||| ||||||||||| || || | |||| || ||||| ||||| |
Sbjct 7940 CAAGCGTTCTGCCATCTTCCAATTGTTTACCAGCAAAAATCAGTCTCTGCTGATCCGGAG 7881
Query 45232 GAATGCCTTCTTTATCTTG 45250
|||||||||| || || ||
Sbjct 7880 GAATGCCTTCCTTGTCCTG 7862
>seq6246
Length=1554407
Score = 86.0 bits (94), Expect = 6e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
|| || ||||| | | || || || || ||||| ||||||||||| || || |||
Sbjct 817922 CCACCACGGAGACGGAGGACGAGGTGGAGTGTTGACTCCTTTTGGATGTTGTAGTCGGCT 817863
Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233
| |||| | || || | || ||||| ||| | || | || ||||||||||| |||
Sbjct 817862 AGGGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGA 817803
Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293
|| || || || || || || || |||| || | |||||| || || |||||
Sbjct 817802 ATCCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCCGATGATTCGACC 817743
Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATCGC 45343
|| || || | || || || ||||| ||||| || || || ||||| ||
Sbjct 817742 TCTAGGGTTATGGTCTTTCCCGTTAGGGTTTTCACGAAGATCTGCATGGC 817693
>seq1669
Length=710980
Score = 86.0 bits (94), Expect = 6e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
|| || ||||| | | || || || || ||||| ||||||||||| || || |||
Sbjct 58991 CCACCACGGAGGCGGAGGACGAGGTGGAGTGTTGACTCCTTTTGGATGTTGTAGTCGGCT 59050
Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233
| |||| | || || | || ||||| ||| | || | || ||||||||||| |||
Sbjct 59051 AGGGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGA 59110
Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293
|| || || || || || || || |||| || | |||||| || || |||||
Sbjct 59111 ATCCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCCGATGATTCGACC 59170
Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATCGC 45343
|| || || | || || || ||||| ||||| || || || ||||| ||
Sbjct 59171 TCTAGGGTTATGGTCTTTCCCGTTAGGGTTTTCACGAAGATCTGCATGGC 59220
>seq13803
Length=1821802
Score = 82.4 bits (90), Expect = 7e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
|| || || |||| | ||| || ||||| || || ||||| |||||||| || |||
Sbjct 337631 CCACCACGAAGCCGAAGCACCAGGTGCAGAGTCGACTCCTTCTGGATATTGTAGTCGGCC 337572
Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233
| |||| || || | || || |||||| | || | || ||||||||||| ||
Sbjct 337571 AAGGTTCGCCCGTCTTCGAGCTGCTTGCCTGCGAAGATGAGGCGCTGCTGGTCCGGTGGG 337512
Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292
|| || || || || || || || |||| || | || | |||||||| ||||| ||
Sbjct 337511 ATACCCTCCTTGTCCTGGATCTTCGCCTTGA-CGTTGTCGATTGTGTCGGAGGACTCCAC 337453
Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| | || | || || || ||||| ||||| || || || ||||||
Sbjct 337452 CTCCAACGTTATGGTCTTACCCGTTAGGGTTTTCACGAAGATCTGCATC 337404
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451918929653400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |