Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20cavaleriei_20[genbank_20GCA_5F002013975.1_202017-03-03] 14,915 sequences; 357,216,162 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq10805 86.0 1e-11 >seq10805 Length=1012358 Score = 86.0 bits (94), Expect = 1e-11 Identities = 66/78 (85%), Gaps = 3/78 (4%) Strand=Plus/Plus Query 324417 ATTGCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGT 324476 || |||| |||||||||| |||||||| ||||||||||||||||||||||| | ||| Sbjct 35908 ATCGCGGGGTAGAGCAGTTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACG---GGT 35964 Query 324477 TCGAATCCCACCTCCGCA 324494 || |||||| ||||||| Sbjct 35965 TCAAATCCCGTCTCCGCA 35982 Score = 86.0 bits (94), Expect = 1e-11 Identities = 66/78 (85%), Gaps = 3/78 (4%) Strand=Plus/Plus Query 324417 ATTGCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGT 324476 || |||| |||||||||| |||||||| ||||||||||||||||||||||| | ||| Sbjct 46317 ATCGCGGGGTAGAGCAGTTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACG---GGT 46373 Query 324477 TCGAATCCCACCTCCGCA 324494 || |||||| ||||||| Sbjct 46374 TCAAATCCCGTCTCCGCA 46391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147371097267670