Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20cavaleriei_20[genbank_20GCA_5F002013975.1_202017-03-03] 14,915 sequences; 357,216,162 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq9360 138 2e-27 >seq9360 Length=2047533 Score = 138 bits (152), Expect = 2e-27 Identities = 380/571 (67%), Gaps = 15/571 (3%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||||| ||||||||||| || || || |||||||| || || ||||||| Sbjct 1277466 ATTTGGGAAATGTACAAGAAAGCCGAAGCGTCGTTTTGGACCGCTGAGGAAGTTGATCTT 1277525 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGTAC 25596 | | || | | |||| | || ||| || |||||| |||| || ||| | || Sbjct 1277526 TCGCAAGATCTCCGCCACTGGGAGGCCCTAACCGCTGACGAGAAGCACTTCGTCACGCAC 1277585 Query 25597 GTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTC 25656 ||| | || ||||| |||||||| || || || || |||||| || || || ||| Sbjct 1277586 GTGCTCGCCTTCTTCGCAGCCTCCGACGGCATCGTCCTCGAGAACCTCGCCGGAAGGTTC 1277645 Query 25657 ACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGT-TTCTACGGTTTCCAGATGGCCATCGA 25715 | | ||| || ||| || ||||| ||| |||||||| ||||| || |||||||| Sbjct 1277646 ATGACGGAGGTCCAGGTCGCCGAGGCGC-GTGCCTTCTACGGCTTCCAAATCGCCATCGA 1277704 Query 25716 AAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTCGCCGA 25775 || | ||||| || |||| | |||||| || ||||| | |||| || ||| Sbjct 1277705 GAACATCCACTCCGAAATGTACTCGCTGCTTCTAGAAACTTACATCAAAGACTCCGACGA 1277764 Query 25776 GAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTG 25835 | | || || ||| ||||||||| | ||| || || | ||| || ||| Sbjct 1277765 AAAGAACCGTCTCTTTCACGCCATCGAGACGGTTCCCTGCGTCGCAAAGAAAGCCACGTG 1277824 Query 25836 GGCCATGAAGTGGATCAACAGC-CAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTG 25894 ||| | || |||||| || || | ||| || || | ||| | | | || |||| Sbjct 1277825 GGCGTTAAATTGGATCGACGGCTCGGAG----ACTTTCGCGGAGAGATTAATCGCGTTTG 1277880 Query 25895 CTGCTGTGGAGGGCATCTTTTTC--AGCG-GTTCGTTTGCGGCCATCTTCTGGCTCAAGC 25951 || |||||||| || || ||| || | ||| |||||| | || || |||||||| Sbjct 1277881 CTTGCGTGGAGGGGATTTTCTTCTCAGGGAGTT--TTTGCG-CGATATTTTGGCTCAAAA 1277937 Query 25952 AGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAGGGACGAGGGT 26010 || ||| ||||| ||| | || || || |||||| | ||| | || |||||| Sbjct 1277938 AGCGCGGGTTAATGCC-GGGATTAACATTCTCAAACGAGTTGATCTCGCGAGATGAGGGT 1277996 Query 26011 CTCCACAGAGATTTTGCCTGCCTGCTCTACA 26041 |||||| | ||||| || |||||| | |||| Sbjct 1277997 CTCCACTGCGATTTCGCGTGCCTGTTGTACA 1278027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928671628497600