Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20cavaleriei_20[genbank_20GCA_5F002013975.1_202017-03-03] 14,915 sequences; 357,216,162 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq3221 129 4e-25 seq7271 113 3e-20 seq5889 104 2e-17 seq1028 104 2e-17 seq13804 87.8 1e-12 >seq3221 Length=646307 Score = 129 bits (142), Expect = 4e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||| || || ||||||||||| || || || ||||| |||||||| || | Sbjct 212074 AAGATGCAGATATTTGTGAAAACCCTCACCGGCAAGACAATCACCCTCGAAGTGGAGAGC 212015 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | ||||| | || | | || || || ||||| || || | ||||| || Sbjct 212014 TCCGACACAATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATTCCGCCGGAC 211955 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || |||||| | || ||||| || || ||||| ||||||| |||||||| | ||||||| Sbjct 211954 CAGCAGCGTCTCATCTTTGCAGGGAAGCAACTCGAAGACGGCCGCACTTTGGCCGATTAC 211895 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 ||||| |||||||| ||||| || ||| | || | ||| | || || ||| Sbjct 211894 AACATTCAAAAAGAATCCACTTTGCATCTTGTCCTCAGGCTTCGTGGTGGA 211844 Score = 118 bits (130), Expect = 7e-22 Identities = 146/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||| ||||| |||||||| || || |||||||||||||||||||| || | Sbjct 262033 AATATGCAGATCTTCGTGAAAACCCTAACCGGCAAAACGATCACTCTCGAAGTGGAGAGC 261974 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | ||||| | || | | || || || ||||| || || | || || ||| Sbjct 261973 TCTGACACAATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGGATCCCTCCGGAT 261914 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || |||||| | || || ||||| || ||||| ||||| | ||||| || | ||||||| Sbjct 261913 CAGCAGCGTCTGATCTTCGCCGGAAAGCAACTCGAAGATGGCCGCACCTTGGCCGATTAC 261854 Query 23788 AACATACAAAAAGAGTCCAC 23807 ||||| || || ||||| || Sbjct 261853 AACATCCAGAAGGAGTCAAC 261834 Score = 116 bits (128), Expect = 3e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| |||||||| || || || |||||||||||||| || || | Sbjct 219938 ATGCAGATCTTCGTCAAAACCCTAACTGGGAAGACGATCACTCTCGAGGTGGAGAGTTCA 219879 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || |||| ||| | || | || | | ||||| ||||| | || |||||||| Sbjct 219878 GATACGATTGATAATGTCAAGGCCAAGA-TCCAAGACAAGGAAGGGATCCCACCAGATCA 219820 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || |||||||| |||||| ||||||||| ||||| || | || || || Sbjct 219819 ACAAAGATTGATCTTTGCCGGAAAACAATTGGAAGACGGCCGCACGTTGGCTGACTATAA 219760 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || |||||||| || Sbjct 219759 CATCCAGAAAGAGTCAAC 219742 Score = 114 bits (126), Expect = 9e-21 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||| ||||| |||||||| |||||||| ||||||||||| ||||| || | | Sbjct 211844 AATGCAGATCTTCGTCAAAACCCTGACGGGAAAGACGATCACTCTGGAAGTCGAGAGCTC 211785 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| | | || |||||| ||||| ||||| | || || ||||| Sbjct 211784 TGACACCATTGACAACGTCAAGGCAAAAATCCAGGACAAGGAAGGGATCCCACCTGATCA 211725 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| | || ||||| || || || ||||| || | | | || | | |||||||| Sbjct 211724 GCAGCGCCTGATCTTTGCTGGGAAGCAGCTGGAGGATGGAAGGACGCTTGCGGATTACAA 211665 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || ||||| || Sbjct 211664 CATTCAGAAGGAGTCGAC 211647 Score = 113 bits (124), Expect = 3e-20 Identities = 145/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||| || || |||||||| || || |||||||||||||||||||| || | Sbjct 220396 AATATGCAGATCTTTGTGAAAACCCTAACCGGCAAAACGATCACTCTCGAAGTGGAGAGC 220337 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | ||||| | || | | || || || ||||| || || | || || ||| Sbjct 220336 TCTGACACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGGATCCCTCCGGAT 220277 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || |||||| | || || ||||| || ||||| ||||| | ||||| || | ||||||| Sbjct 220276 CAGCAGCGTCTGATCTTCGCCGGAAAGCAACTCGAAGATGGCCGCACCTTGGCCGATTAC 220217 Query 23788 AACATACAAAAAGAGTCCAC 23807 ||||| || || ||||| || Sbjct 220216 AACATCCAGAAGGAGTCAAC 220197 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| |||||||| || || || ||||| || ||||| || || | | Sbjct 261802 ATGCAGATCTTCGTCAAAACCCTGACCGGGAAGACGATTACCCTCGAGGTCGAGAGCTCC 261743 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || || ||||| || || | || || || || Sbjct 261742 GACACGATCGATAACGTGAAGGCCAAGATCCAAGACAAGGAGGGAATCCCTCCCGACCAG 261683 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || || ||||| || ||||| ||||||| || || || | |||||||||| Sbjct 261682 CAGAGGCTGATCTTCGCCGGAAAGCAACTCGAAGACGGCCGGACCTTGGCCGATTACAAC 261623 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || |||||||| ||||| || ||| | ||| | ||| | || || || Sbjct 261622 ATCCAAAAAGAATCCACCTTGCATCTTGTTCTCAGGCTCCGTGGTGG 261576 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| |||||| | || || ||||| || ||||||||||| || | || Sbjct 291492 ATGCAGATCTTCGTGAAAACCTTGACCGGCAAAACTATTACTCTCGAAGTCGAGAGCTCG 291433 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| | || | |||| || || ||||| || || | ||||| || || Sbjct 291432 GACACTATCGACAACGTAAAGGCCAAGATCCAAGACAAGGAGGGAATTCCGCCGGACCAG 291373 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || ||||| || || || || || |||| ||||| || | |||||||||| Sbjct 291372 CAGAGGCTTATCTTTGCTGGAAAGCAGCTCGAGGACGGCCGCACCTTGGCCGATTACAAC 291313 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 291312 ATCCAGAAGGAGTCAAC 291296 Score = 100 bits (110), Expect = 2e-16 Identities = 159/227 (70%), Gaps = 1/227 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| |||||||| || || || ||||| || ||||| || || | | Sbjct 220165 ATGCAGATCTTCGTCAAAACCCTGACCGGGAAGACGATTACCCTCGAGGTCGAGAGCTCC 220106 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || || ||||| || || | || || || || Sbjct 220105 GACACGATCGATAACGTGAAGGCCAAGATCCAAGACAAGGAGGGAAT-CCTCCCGACCAG 220047 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || || ||||| || ||||| ||||||| ||||| || | |||||||||| Sbjct 220046 CAGAGGCTGATCTTCGCCGGAAAGCAACTCGAAGACGGCCGCACCTTGGCCGATTACAAC 219987 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || |||||||| ||||| || ||| | || | ||| | || || || Sbjct 219986 ATCCAAAAAGAATCCACCTTGCATCTTGTCCTCAGGCTCCGTGGTGG 219940 Score = 98.7 bits (108), Expect = 7e-16 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| |||||||| || || || |||||||||||||| || || | Sbjct 261574 ATGCAGATCTTCGTCAAAACCCTAACTGGGAAGACGATCACTCTCGAGGTGGAGAGTTCA 261515 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || |||| ||| | || | || | | ||||| || || | || |||||||| Sbjct 261514 GATACGATTGATAATGTCAAGGCCAAGA-TCCAAGACAAGGAGGGGATCCCACCAGATCA 261456 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || ||||| || |||||| ||||||||| || || || | || || || Sbjct 261455 ACAAAGATTGATCTTTGCTGGAAAACAATTGGAAGACGGCCGTACGTTGGCTGACTATAA 261396 Query 23790 CATACAAAAAGAGTCCAC 23807 || || |||||||| || Sbjct 261395 TATCCAGAAAGAGTCAAC 261378 Score = 98.7 bits (108), Expect = 7e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| |||||||| || || || ||||||||||| || || || || Sbjct 290808 ATGCAGATCTTCGTCAAAACCCTAACTGGGAAGACGATCACTCTGGAGGTGGAGAGTTCG 290749 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || |||| | | || || || |||||||| || | ||||| || || Sbjct 290748 GATACGATTGATAACGTCAAGGCCAAGATCCAGGACAAAGAGGGGATCCCGCCGGACCAG 290689 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || | || || || ||||| || || ||||||| | ||||| || | |||||||||| Sbjct 290688 CAAAGATTGATCTTCGCCGGTAAGCAGTTGGAAGATGGCCGCACCTTGGCCGATTACAAC 290629 Query 23791 ATACAAAAAGAGTCCAC 23807 || || |||||||| || Sbjct 290628 ATTCAGAAAGAGTCAAC 290612 Score = 98.7 bits (108), Expect = 7e-16 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| |||||||| || || ||||| || ||||||||||| || | | Sbjct 291264 ATGCAGATCTTCGTGAAAACCCTGACTGGCAAAACTATTACTCTCGAAGTCGAGAGCTCC 291205 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | || ||| ||||| || || | || || || || Sbjct 291204 GACACCATCGACAATGTCAAGGC-GAAGATTCAAGACAAGGAGGGAATCCCCCCGGACCA 291146 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || || || || || || || || |||| ||||| || | ||||||||| Sbjct 291145 GCAGAGGCTTATCTTCGCTGGAAAGCAGCTCGAGGACGGCCGCACCTTGGCCGATTACAA 291086 Query 23790 CATACAAAAAGAGTCCAC 23807 |||||| || ||||| || Sbjct 291085 CATACAGAAGGAGTCAAC 291068 Score = 95.1 bits (104), Expect = 8e-15 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || |||||||| || || || ||||| || ||||| ||||| | | Sbjct 291036 ATGCAGATCTTTGTCAAAACCCTAACCGGGAAGACGATAACCCTCGAGGTTGAGAGCTCA 290977 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || ||| ||||| || || | || || || || Sbjct 290976 GACACGATCGATAACGTCAAGGCGAAGATTCAAGACAAGGAGGGAATCCCCCCGGACCAG 290917 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || ||||| ||||| ||||||||||||| ||||| || | |||||||| Sbjct 290916 CAGAGGCTGATCTTTGCTGGCAAGCAACTGGAAGACGGCCGCACCTTGGCTGATTACAAT 290857 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 290856 ATCCAGAAGGAGTCAAC 290840 >seq7271 Length=339586 Score = 113 bits (124), Expect = 3e-20 Identities = 153/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || |||||||| || |||||||| |||||||| || || || | | Sbjct 95207 ATGCAGATTTTTGTGAAAACCCTGACAGGAAAAACAATCACTCTTGAGGTAGAAAGCTCT 95266 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | ||| | |||||| ||||| || ||| | || |||||||| Sbjct 95267 GACACCATTGACAATGTGAAAGC-CAAAATTCAAGACAAGGAGGGTATCCCACCAGATCA 95325 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||| || || || || ||||| | | | ||| | | || || || Sbjct 95326 GCAGAGGCTCATTTTTGCTGGAAAGCAGCTTGAAGATGGAAGGACTCTTGCAGACTATAA 95385 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820 ||| || ||||| ||||| | || || ||| Sbjct 95386 CATCCAGAAAGAATCCACTCTCCACTTGGTT 95416 Score = 113 bits (124), Expect = 3e-20 Identities = 150/206 (73%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||||||||| || || | ||||||||||| ||||| || || ||||| | Sbjct 99531 AATGCAGATTTTCGTGAAGACATTGACGGGAAAAACCATCACCCTGGAGGTTGAGAGTTC 99590 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 ||||| |||| ||| | || | ||||| ||||| ||||| | || ||||||| Sbjct 99591 AGACACCATTGATAATGTGAAGGC-TAAAATCCAGGACAAGGAAGGGATTCCTCCAGATC 99649 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 | ||| | || || |||||||| || || ||||| || | || ||||| | || |||| Sbjct 99650 AGCAGAGGTTGATTTTTGCCGGGAAGCAGCTGGAGGATGGGCGTACTTTGGCTGACTACA 99709 Query 23789 ACATACAAAAAGAGTCCACATTACAT 23814 | || || || ||||| || |||||| Sbjct 99710 ATATCCAGAAGGAGTCTACTTTACAT 99735 Score = 107 bits (118), Expect = 1e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || |||||||| || || ||||| || ||| | || ||||| | | Sbjct 94979 ATGCAGATTTTTGTGAAAACCCTGACTGGTAAAACTATAACTTTGGAGGTTGAAAGCTCT 95038 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| |||| | || | || ||||| || || | || || ||||| Sbjct 95039 GACACAATCGACAATGTTAAGGCTAAGA-TTCAGGACAAGGAGGGCATCCCTCCCGATCA 95097 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || ||||| ||||||||||| ||||| | || ||| ||| || ||||| Sbjct 95098 GCAGAGATTGATCTTTGCTGGCAAACAACTTGAAGATGGCCGTACTCTAGCTGACTACAA 95157 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || ||||| || Sbjct 95158 CATCCAGAAGGAGTCAAC 95175 Score = 105 bits (116), Expect = 5e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || |||||||| || || || || || ||| | || ||||| | | Sbjct 55907 ATGCAGATTTTTGTGAAAACCCTGACTGGTAAGACTATAACTTTGGAGGTTGAAAGCTCT 55966 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | || | | ||||| || || | || || ||||| Sbjct 55967 GACACGATCGACAATGTCAAGGCCAAGA-TCCAGGACAAGGAGGGCATCCCACCTGATCA 56025 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||| | ||||| ||||||||||||||||| ||||| | || ||| | | || ||||| Sbjct 56026 ACAGAGGTTAATCTTTGCCGGCAAACAACTTGAAGATGGTCGTACTCTTGCTGACTACAA 56085 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819 ||| || || ||||| || | ||||| || Sbjct 56086 CATCCAGAAGGAGTCAACCCTCCATTTGGT 56115 Score = 100 bits (110), Expect = 2e-16 Identities = 143/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || |||||||| ||||| || ||||| || || || || | | Sbjct 98164 ATGCAGATCTTTGTAAAGACCCTCACTGGAAAGACTATCACCCTTGAGGTGGAAAGCTCC 98223 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | ||| | || | || ||||| ||||| | || ||||| || Sbjct 98224 GACACCATTGACAATGTCAAAGCCAAGA-TTCAGGACAAGGAAGGGATCCCACCAGACCA 98282 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || | | || ||||| ||||||||||| || || | ||||| | | ||| || || Sbjct 98283 GCAAAGGCTTATTTTTGCTGGCAAACAACTTGAGGATGGCCGCACCCTTGCCGACTATAA 98342 Query 23790 CATACAAAAAGAGTCCACA 23808 ||| || || ||||||||| Sbjct 98343 CATTCAGAAGGAGTCCACA 98361 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| || || || ||||| |||||||| |||||||| || || || || Sbjct 99304 ATGCAAATTTTTGTGAAGACTCTCACTGGAAAAACAATCACTCTGGAGGTAGAGAGTTCG 99363 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | || | || | | || || || || | || ||||| || Sbjct 99364 GACACGATTGATAATGTGAAGGCCAAGA-TCCAAGATAAGGAGGGCATTCCACCAGACCA 99422 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || ||||| ||||| || || ||||| | | || | | |||||||| Sbjct 99423 GCAGAGGTTGATTTTTGCAGGCAAGCAGCTTGAAGATGGGAGGACCCTTGCAGATTACAA 99482 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 ||| || || || |||||| | ||||| || || || |||| |||||| Sbjct 99483 CATTCAGAAGGAATCCACACTGCATTTGGTGTTGAGACTGCGTGGAGGA 99531 Score = 93.3 bits (102), Expect = 3e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || || || |||||||| ||||| || || || || || || || | || Sbjct 94751 ATGCAAATCTTTGTAAAGACCCTCACTGGAAAGACCATTACCCTTGAGGTGGAAAGCTCG 94810 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | ||| | |||| || || || ||||| | || ||||| || Sbjct 94811 GACACCATTGACAATGTCAAAGCCAAAA-TTCAGGATAAGGAAGGGATCCCACCAGACCA 94869 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || | | || ||||| ||||||||||| || || | |||||| | | || ||||| Sbjct 94870 GCAAAGGCTCATCTTTGCTGGCAAACAACTTGAGGATGGACGCACACTTGCAGACTACAA 94929 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819 ||| || || || || || | ||||| || Sbjct 94930 CATCCAGAAGGAATCAACCCTTCATTTGGT 94959 Score = 89.7 bits (98), Expect = 3e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || || ||||| || ||||| ||||| | || ||||| || Sbjct 56363 ATGCAGATTTTTGTGAAGACACTCACTGGGAAAACCATCACATTGGAGGTTGAGAGTTCG 56422 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | || | || | | || || || || | || ||||| || Sbjct 56423 GACACAATTGACAATGTGAAGGCTAAGA-TCCAGGATAAGGAGGGGATTCCCCCAGACCA 56481 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || ||||| || |||||||| || || | | | ||| | | |||||||| Sbjct 56482 GCAGAGGTTGATCTTTGCTGGAAAACAACTTGAGGATGGAAGGACTCTTGCTGATTACAA 56541 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || |||||||| Sbjct 56542 CATCCAGAAGGAGTCCAC 56559 Score = 84.2 bits (92), Expect = 1e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || || ||||| || ||||| ||||| | || ||||| || Sbjct 95435 ATGCAGATTTTTGTGAAGACACTCACTGGGAAAACCATCACATTGGAGGTTGAGAGTTCG 95494 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| |||| | || | | || || || || | || || || || Sbjct 95495 GACACAATTGACAATGTTAAGGCTAAGA-TCCAGGATAAGGAGGGGATTCCACCGGACCA 95553 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || ||||| || || ||||| || || | | | ||| | | |||||||| Sbjct 95554 GCAGAGGTTGATCTTTGCTGGAAAGCAACTTGAGGATGGAAGGACTCTTGCTGATTACAA 95613 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || |||||||| Sbjct 95614 CATCCAGAAGGAGTCCAC 95631 >seq5889 Length=513596 Score = 104 bits (114), Expect = 2e-17 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 23606 TTAAA--ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGA 23663 ||||| |||||||| ||||| |||||||| || || || || || ||||||||||| || Sbjct 196655 TTAAACGATGCAGATCTTCGTGAAAACCCTAACCGGCAAGACCATTACTCTCGAAGTCGA 196714 Query 23664 CTCCACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCC 23723 | | ||||| | || | | || || || ||||| ||||| | || || Sbjct 196715 GAGCTCCGACACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGAATCCCTCC 196774 Query 23724 AGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGA 23783 || || |||||| | || || ||||| ||||| || ||||||| ||||| || | ||| Sbjct 196775 GGACCAGCAGCGTCTGATCTTCGCCGGAAAACAGCTCGAAGACGGCCGCACCTTGGCCGA 196834 Query 23784 TTACAACATACAAAAAGAGTCCAC 23807 |||||| || ||||| || || || Sbjct 196835 TTACAATATCCAAAAGGAATCGAC 196858 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| |||||||| |||||||| || || |||||||||||||| | | Sbjct 197118 ATGCAGATATTCGTCAAAACCCTAACGGGAAAGACCATTACTCTCGAAGTTGAGAGCTCC 197177 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || || ||||| ||||| | ||||| || || Sbjct 197178 GACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGGATTCCGCCGGACCAG 197237 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || || || || || ||||| || |||| ||||| || | ||||||||| Sbjct 197238 CAGAGGCTGATCTTCGCAGGAAAGCAACTCGAGGACGGCCGCACCTTGGCTGATTACAAC 197297 Query 23791 ATACAAAAAGAGTCCACA 23808 || || || || || ||| Sbjct 197298 ATCCAGAAGGAATCAACA 197315 Score = 98.7 bits (108), Expect = 7e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| |||||||| |||||||| ||||| || ||||| || || | | Sbjct 197574 ATGCAGATATTCGTCAAAACCCTAACGGGAAAGACGATTACCCTCGAGGTCGAGAGCTCC 197633 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || || || ||||| ||||| | ||||| || || Sbjct 197634 GACACGATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGGATTCCGCCGGACCAG 197693 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||||| || || || ||||| || ||||| || | | | || | | ||||||||| Sbjct 197694 CAGCGTTTGATCTTCGCTGGCAAGCAGCTGGAGGATGGAAGGACGCTCGCGGATTACAAC 197753 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || || || || Sbjct 197754 ATTCAGAAGGAATCAAC 197770 Score = 95.1 bits (104), Expect = 8e-15 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| |||||||| |||||||| || || |||||||||||||| | | Sbjct 197346 ATGCAGATATTCGTCAAAACCCTAACGGGAAAGACCATTACTCTCGAAGTTGAGAGCTCC 197405 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || || ||||| ||||| | ||||| || || Sbjct 197406 GACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGGATTCCGCCGGACCAG 197465 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || || || || || ||||| || |||| ||||| || | |||||||| Sbjct 197466 CAGAGGCTGATCTTCGCAGGAAAGCAACTCGAGGACGGCCGCACCTTGGCTGATTACAAT 197525 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || || || || Sbjct 197526 ATCCAGAAGGAATCAAC 197542 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| |||||||| || || || || || |||||||||||||| | | Sbjct 196890 ATGCAGATCTTCGTGAAAACCCTAACCGGCAAGACCATTACTCTCGAAGTTGAGAGCTCC 196949 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || || ||||| ||||| | ||||| || || Sbjct 196950 GACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGGATTCCGCCGGACCAG 197009 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || || || || || ||||| || |||| ||||| || | ||||||||| Sbjct 197010 CAGAGGCTGATCTTCGCAGGAAAGCAACTCGAGGACGGCCGCACCTTGGCTGATTACAAC 197069 Query 23791 ATACAAAAAGAGTCCACA 23808 || || || || || ||| Sbjct 197070 ATCCAGAAGGAATCAACA 197087 >seq1028 Length=430 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| |||||||| || || || ||||| || ||||| || || | | Sbjct 151 ATGCAGATCTTCGTCAAAACCCTGACCGGGAAGACGATTACCCTCGAGGTCGAGAGCTCC 210 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || || ||||| || || | || || || || Sbjct 211 GACACGATCGATAACGTGAAGGCCAAGATCCAAGACAAGGAGGGAATCCCTCCCGACCAG 270 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || || ||||| || ||||| ||||||| ||||| || | |||||||||| Sbjct 271 CAGAGGCTGATCTTCGCCGGAAAGCAACTCGAAGACGGCCGCACCTTGGCCGATTACAAC 330 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || |||||||| ||||| || ||| | || | ||| | || || || Sbjct 331 ATCCAAAAAGAATCCACCTTGCATCTTGTCCTCAGGCTCCGTGGTGG 377 >seq13804 Length=830140 Score = 87.8 bits (96), Expect = 1e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||| ||||| || || | || || || |||||||| || || || || | | Sbjct 396041 AATGCAGATCTTCGTCAAGACGTTGACCGGGAAGACGATCACCCTGGAGGTGGAGAGCTC 396100 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || | | || || || |||||||| || | || || || || Sbjct 396101 CGACACGATCGACAACGTGAAGGCCAAGATCCAGGACAAAGAGGGGATTCCACCGGACCA 396160 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| || || || |||||||| || || || || | || ||| | | ||||||||| Sbjct 396161 GCAGCGGTTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGGACTCTCGCCGATTACAA 396220 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| ||||| |||||||| Sbjct 396221 CATTCAAAAGGAGTCCAC 396238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337948157776820