Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20clementina_20[refseq_20GCF_5F000493195.1_202013-11-08] 1,398 sequences; 301,364,702 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq965 122 1e-22 seq1165 118 1e-21 seq1282 98.7 1e-15 seq1030 98.7 1e-15 seq1 98.7 1e-15 seq616 82.4 9e-11 >seq965 Length=51047765 Score = 122 bits (134), Expect = 1e-22 Identities = 157/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 ||||| |||| || |||||| || |||||||| || |||| || ||| |||| || Sbjct 46933582 CACCAGGTGCAGAGTCGACTCCTTCTGGATATTGTAGTCGGCCAAGGTTCGCCCGTCTTC 46933523 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 |||||||| || ||||| ||||| ||||||||||| | || | | |||||||||| Sbjct 46933522 GAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTGTCCTG 46933463 Query 43094 GATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 43152 ||| || |||| ||| | | | |||||| || ||||| || | ||| ||||| | Sbjct 46933462 GATCTTCGCCTTGA-CGTTGTCGATTGTGTCGGAGGACTCCACCTCCAACGTTATGGTCT 46933404 Query 43153 TGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186 | |||||||| || || || ||||| ||||| || Sbjct 46933403 TACCCGTTAGGGTTTTCACGAAGATCTGCATCTT 46933370 >seq1165 Length=25613772 Score = 118 bits (130), Expect = 1e-21 Identities = 157/214 (73%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 42980 ATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTG 43039 |||||| ||| || |||||||| |||||||| |||| ||| || |||| || || || Sbjct 10936100 ATGCAAAGTGGATTCTTTTTGAATGTTGTAATCGGCCAAAGTGCGGCCGTCTTCGAGTTG 10936041 Query 43040 CTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTT 43099 ||| ||||| || ||||| ||||||||||| | ||| | | |||||||||| ||| || Sbjct 10936040 CTTCCCAGCAAAGATGAGACGCTGCTGGTCCGGCGGAATTCCCTCCTTGTCCTGGATCTT 10935981 Query 43100 TTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGC 43155 |||| ||| | | | ||||| |||| ||||| |||| ||||| || |||| Sbjct 10935980 GGCCTTGA-CGTTGTCGATTGTGTCGGAGCTC---TCCACTTCGAGGGTGATTGTCTTGC 10935925 Query 43156 CCGTTAGCGTCTTTACAAAGATTTGCATTTTTAC 43189 | || || || || ||||| || ||||| || || Sbjct 10935924 CGGTGAGGGTTTTCACAAATATCTGCATCTTCAC 10935891 Score = 109 bits (120), Expect = 6e-19 Identities = 144/196 (73%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || |||||||| |||| || ||| |||| || |||||||| || ||||| Sbjct 10317630 CTCCTTCTGGATGTTGTAATCCGCCAAGGTGCGCCCGTCCTCGAGCTGCTTTCCGGCGAA 10317571 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || ||||||||||| | || | | ||||||||| ||| || |||| ||| Sbjct 10317570 GATCAGCCGCTGCTGGTCCGGTGGAATCCCTTCCTTGTCCTGGATCTTAGCCTTGA-CGT 10317512 Query 43112 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | |||||| |||| ||||| |||| |||||||| ||||| || | || | Sbjct 10317511 TGTCGATCGTGTCGGAGCTC---TCCACCTCGAGAGTGATGGTCTTGCCGGTCAAAGTTT 10317455 Query 43168 TTACAAAGATTTGCAT 43183 | |||||||| ||||| Sbjct 10317454 TCACAAAGATCTGCAT 10317439 Score = 102 bits (112), Expect = 9e-17 Identities = 143/197 (73%), Gaps = 8/197 (4%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||||||||| |||||||| || |||||||| | || || |||||||| || ||||| Sbjct 10318086 CTCCTTTTGAATGTTGTAATCGGCGAGAGTCCGGCCATCCTCGAGCTGCTTGCCGGCGAA 10318027 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| | ||||||||| | || | | ||| |||||| ||| || || | ||| Sbjct 10318026 GATGAGCCTCTGCTGGTCCGGAGGAATCCCCTCTTTGTCCTGGATCTTGGCCTTCA-CGT 10317968 Query 43112 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | |||||| |||| ||||| || | || || || || || || | ||||| Sbjct 10317967 TGTCGATCGTGTCGGAGCTC---TCCACCTCCAGGGTAATCGTCTTCCCGGTCAACGTCT 10317911 Query 43168 TTACAAAGATTTGCATT 43184 | || ||||| |||||| Sbjct 10317910 TGACGAAGATCTGCATT 10317894 Score = 100 bits (110), Expect = 3e-16 Identities = 163/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || || || | |||||| |||| ||| | || ||||| ||||| |||||||| || Sbjct 12024613 CCACCCCTCAGACGCAAAACCAGATGAAGAGTTGATTCCTTCTGAATGTTGTAATCCGCG 12024554 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || |||| | || || |||||||| |||||||| || | ||||||||||| | ||| Sbjct 12024553 AGCGTCCTTCCATCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCCGGCGGA 12024494 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 43132 | | ||||||||| ||| || |||| ||| | | | |||||| |||| || Sbjct 12024493 ATCCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATCGTGTCGGAGCTC---TC 12024438 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || |||| || || || || |||||||| || || || || || ||||| Sbjct 12024437 GACTTCGAGGGTAATCGTCTTTCCCGTTAGGGTTTTGACGAATATCTGCAT 12024387 Score = 98.7 bits (108), Expect = 1e-15 Identities = 165/235 (70%), Gaps = 8/235 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| | | ||| | ||||| ||| | || |||||||| ||||||||||| ||| Sbjct 12024157 CCTCCACGGAGACGAAGCACCAGATGAAGCGTCGATTCCTTTTGGATATTGTAATCGGCC 12024098 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | || || |||| || ||||| || || ||||| || || ||||||||||| | || Sbjct 12024097 AAGGTGCGGCCGTCTTCGAGCTGTTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGG 12024038 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 43132 | | |||||||| ||| || |||| ||| | | | ||||| |||| || Sbjct 12024037 ATTCCTTCCTTGTCTTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCGGAGCTC---TC 12023982 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTT 43187 || |||| || ||||| ||||| ||||| || || || ||||| ||||| ||| Sbjct 12023981 GACTTCGAGAGTAATGGTCTTGCCGGTTAGGGTTTTCACGAAGATCTGCATCTTT 12023927 Score = 98.7 bits (108), Expect = 1e-15 Identities = 141/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || ||||||||||| |||| || || |||| || || ||||| || ||||| Sbjct 12024349 TCCTTCTGGATATTGTAATCGGCCAAGGTGCGGCCGTCCTCGAGTTGCTTTCCGGCGAAG 12024290 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || || | ||||||||| | ||| | | ||||||||| ||| || |||| ||| Sbjct 12024289 ATCAGCCTCTGCTGGTCCGGCGGAATCCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTT 12024231 Query 43113 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | | |||||| |||| || || |||| || ||||| ||||| ||||| || || Sbjct 12024230 GTCGATCGTGTCGGAGCTC---TCAACTTCGAGAGTAATGGTCTTGCCGGTTAGGGTTTT 12024174 Query 43169 TACAAAGATTTGCAT 43183 || ||||| ||||| Sbjct 12024173 CACGAAGATCTGCAT 12024159 Score = 96.9 bits (106), Expect = 4e-15 Identities = 163/232 (70%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || || || | ||||||||||| ||| | || |||||| ||||| |||||||| || Sbjct 10936351 CCGCCCCTCAGACGCAACACCAGATGAAGAGTCGACTCCTTCTGAATGTTGTAATCCGCA 10936292 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || |||| | || || |||||||| ||||| || || || |||||||| || | || Sbjct 10936291 AGCGTCCTTCCATCCTCCAGCTGCTTCCCAGCAAAGATCAGGCGCTGCTGATCAGGTGGG 10936232 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 43132 | | || || ||| ||||||| |||| ||| | | | ||||| |||| || Sbjct 10936231 ATCCCTTCTTTATCCTGGATTTTTGCCTTGA-CGTTGTCAATGGTGTCAGAGCTC---TC 10936176 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 || || | ||||| || || ||||| || || || || ||||| |||||| Sbjct 10936175 GACTTCCAGAGTGATCGTCTTTCCCGTCAGGGTTTTGACGAAGATCTGCATT 10936124 Score = 96.9 bits (106), Expect = 4e-15 Identities = 93/117 (79%), Gaps = 2/117 (2%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| ||||||||||||||||| ||| |||| || |||||||| |||||||| Sbjct 12024806 CTCCTTCTGAATGTTGTAATCAGCCAGAGTACGCCCGTCCTCAAGCTGCTTCCCAGCGAA 12024747 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGA 43107 ||||| | |||||| || | || | | ||||||||| ||| | || | ||||| Sbjct 12024746 GATGAGCCTCTGCTGATCAGGTGGGATCCCTTCCTTGTCC-TGAATCTTGGCTTTGA 12024691 Score = 91.5 bits (100), Expect = 2e-13 Identities = 140/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || |||||||||||||||| || || |||| || || ||||| ||||| || Sbjct 10816861 CTCCTTCTGGATATTGTAATCAGCCAAGGTGCGGCCGTCTTCCAGTTGCTTGCCAGCAAA 10816802 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCG- 43110 || || | ||||||||| | || | | |||||||| | ||| | || | | | || Sbjct 10816801 GATCAGCCTCTGCTGGTCCGGGGGGATTCCCTCCTTGT-CTTGAATCTTCGCCTTAACGT 10816743 Query 43111 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | |||||| |||| || || |||| || || || || || ||||| || | Sbjct 10816742 TATCGATCGTGTCTGAGCTC---TCAACCTCGAGGGTTATCGTCTTCCCGGTTAGGGTTT 10816686 Query 43168 TTACAAAGATTTGCAT 43183 | |||||||| ||||| Sbjct 10816685 TGACAAAGATCTGCAT 10816670 Score = 86.0 bits (94), Expect = 7e-12 Identities = 144/207 (70%), Gaps = 6/207 (3%) Strand=Plus/Minus Query 42980 ATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTG 43039 |||||| ||| || ||||| || |||||||| |||| ||||| |||| || || || Sbjct 10868206 ATGCAAGGTGGATTCTTTTTGGATGTTGTAATCGGCCAAGGTCCGGCCGTCTTCGAGTTG 10868147 Query 43040 CTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTT 43099 ||| |||||||| || || | ||||||||||| || | | ||||||||| ||| || Sbjct 10868146 CTTTCCAGCGAAGATCAGCCTCTGCTGGTCGGGAGGGATTCCCTCCTTGTCTTGGATCTT 10868087 Query 43100 TTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCC 43156 || | | | | |||||| |||| || || |||| || || || || || Sbjct 10868086 GGCCTTCACGTTATCGATCGTGTCGGAGCTC---TCGACCTCGAGGGTAATCGTCTTCCC 10868030 Query 43157 CGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || || || || ||||| ||||| Sbjct 10868029 GGTCAGGGTTTTGACGAAGATCTGCAT 10868003 Score = 86.0 bits (94), Expect = 7e-12 Identities = 139/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||||||||| || || |||||||| || || || |||| ||||||||||| |||||||| Sbjct 10928763 CTCCTTTTGGATGTTATAATCAGCAAGGGTACGGCCGTCCTCTAGCTGCTTCCCAGCGAA 10928704 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 ||||| | |||||| || | || | | ||||||||| ||| | |||| |||| Sbjct 10928703 GATGAGCCTCTGCTGATCTGGTGGAATCCCTTCCTTGTCC-TGAATCTTTGCCTTGACAT 10928645 Query 43111 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | || || ||| ||||| || | || || || || || || | |||| Sbjct 10928644 TATCAATTGTATCAGAACTC---TCCACCTCCAGAGTAATAGTCTTCCCAGTCAAAGTCT 10928588 Query 43168 TTACAAAGATTTGCAT 43183 | ||||| |||||||| Sbjct 10928587 TGACAAAAATTTGCAT 10928572 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| |||| || || ||| ||||||||| |||| |||||||||||||||| |||| Sbjct 15305403 AAAAACTTTCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATAC 15305462 Query 60117 TCACCACTATACTAC 60131 ||||||||||||||| Sbjct 15305463 TCACCACTATACTAC 15305477 >seq1282 Length=25111302 Score = 98.7 bits (108), Expect = 1e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||||||||| || ||||| || || || || | |||| || |||||||| || ||||| Sbjct 21394925 CTCCTTTTGGATGTTGTAGTCGGCTAGGGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAA 21394984 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | | |||||||||| ||| || |||| | Sbjct 21394985 GATGAGACGCTGCTGGTCCGGTGGAATCCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 21395044 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | ||||| ||||| || || | || ||||| || |||||||| || || || Sbjct 21395045 GTCGATGGTGTCCGATGATTCGACCTCTAGGGTTATGGTCTTTCCCGTTAGGGTTTTCAC 21395104 Query 43172 AAAGATTTGCAT 43183 ||||| ||||| Sbjct 21395105 GAAGATCTGCAT 21395116 >seq1030 Length=25649276 Score = 98.7 bits (108), Expect = 1e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||||||||| || ||||| || || || || | |||| || |||||||| || ||||| Sbjct 22532788 CTCCTTTTGGATGTTGTAGTCGGCTAGGGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAA 22532729 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | | |||||||||| ||| || |||| | Sbjct 22532728 GATGAGACGCTGCTGGTCCGGTGGAATCCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 22532669 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | ||||| ||||| || || | || ||||| || |||||||| || || || Sbjct 22532668 GTCGATGGTGTCCGATGATTCGACCTCTAGGGTTATGGTCTTTCCCGTTAGGGTTTTCAC 22532609 Query 43172 AAAGATTTGCAT 43183 ||||| ||||| Sbjct 22532608 GAAGATCTGCAT 22532597 >seq1 Length=28940139 Score = 98.7 bits (108), Expect = 1e-15 Identities = 152/213 (71%), Gaps = 8/213 (4%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| || | ||| |||||| ||||||||||| || || || |||| | || || Sbjct 21033388 ACCAAGTGAAGAGTGGACTCCTTCTGAATATTGTAGTCGGCGAGGGTCCTTCCATCTTCA 21033329 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 |||||||||||||| || || || | ||||||||| | ||| | || |||||||| || Sbjct 21033328 AGCTGCTTACCAGCAAAGATAAGCCTCTGCTGGTCAGGCGGGATGCCTTCCTTGTCT-TG 21033270 Query 43095 ATTTTTTGTTTGAGCGTCGCCACC-GTGTCG---CTCGATTCCACATCGACCGTGATGGT 43150 | | || | || | | | | || || || ||| || || || | || ||||| Sbjct 21033269 AATCTTAGCTTTAACATTGTCAATAGTATCCGAACTC---TCAACTTCTAAGGTAATGGT 21033213 Query 43151 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||| || || ||||| |||||||||||||| Sbjct 21033212 CTTGCCAGTAAGAGTCTTAACAAAGATTTGCAT 21033180 Score = 95.1 bits (104), Expect = 1e-14 Identities = 164/233 (70%), Gaps = 9/233 (4%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || || |||| ||| | || || || | ||| |||||||||||| |||||||| || Sbjct 25531315 CCACCACTTAGACGGAGGACAAAGTGGAGAGTGGACTCCTTTTGAATGTTGTAATCGGCG 25531374 Query 43017 AGAGTCCGCTCGTCATC-TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 |||||| |||| || | ||||| | ||||| ||||| | ||||||| | | ||| Sbjct 25531375 CGAGTCCAGCCGTCCTCAAAATTGCTTGCGGGCGAAGATGAGCCTCTGCTGGCCCGGCGG 25531434 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATT 43131 | | |||||||||| ||| | || || | ||| | | | |||||| |||| | Sbjct 25531435 AATCCCCTCCTTGTCC-TGAATCTTCGTCTTCACGTTGTCGATCGTGTCGGAGCTC---T 25531490 Query 43132 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 |||| || ||||||||||| || || |||||| || ||||| |||||| Sbjct 25531491 CCACCTCCTGAGTGATGGTTTTCCCGGTCGACGTCTTGACGAAGATCTGCATT 25531543 Score = 93.3 bits (102), Expect = 5e-14 Identities = 151/216 (70%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 42971 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 43030 |||||||||||||| |||| ||||| ||||| |||||||| || || |||| | | || Sbjct 21033848 CAACACCAAATGCAGTGTGGATTCCTTCTGAATGTTGTAATCTGCAAGGGTCCTCCCATC 21033789 Query 43031 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 43090 || |||||||| || || || || | | ||||||||| | || | || |||||| || Sbjct 21033788 TTCAAGCTGCTTGCCTGCAAAAATCAACCTCTGCTGGTCTGGTGGAATGCCCTCCTTATC 21033729 Query 43091 CATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGA---TTCCACATCGACCGTGAT 43147 ||| || || | | | | ||||| ||| || || || | ||||| Sbjct 21033728 TTGGATCTTGGCCTTCACATTATCAATAGTGTC---CGAACTCTCTACCTCCAGAGTGAT 21033672 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||| || || || ||||| ||||| |||||||| Sbjct 21033671 TGTTTTTCCAGTGAGAGTCTTCACAAAAATTTGCAT 21033636 Score = 91.5 bits (100), Expect = 2e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||| ||||||| ||| | |||| || | ||| |||||| ||||| || || || || Sbjct 21032951 TCCACCTCTTAGACGGAGGACCAGGTGGAGGGTGGACTCCTTCTGAATGTTATAGTCGGC 21032892 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || || || | || || || || || ||||| || || || | |||||||| | || Sbjct 21032891 AAGGGTGCGGCCATCCTCAAGTTGTTTGCCAGCAAAAATAAGCCTTTGCTGGTCTGGTGG 21032832 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 43134 | | ||||||||| ||| | || | ||||| | | | |||||| ||||| Sbjct 21032831 GATCCCTTCCTTGTCC-TGAATCTTGGCTTTGACATTGTCAATAGTGTCGGAGCTTTCCA 21032773 Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || | ||||| ||||| || || || |||||||||||||| ||||| Sbjct 21032772 CCTCAAGGGTGATAGTTTTTCCAGTGAGGGTCTTTACAAAGATCTGCAT 21032724 Score = 89.7 bits (98), Expect = 6e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || || || | ||| | ||||| |||| || |||||| || || || ||||| || Sbjct 21029199 CCACCCCTAAGACGAAGAACCAAGTGCAGGGTCGACTCCTTCTGGATGTTATAATCGGCG 21029140 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || ||| | || || ||||| |||||||| || || || | |||||| || | || Sbjct 21029139 AGTGTGCGCCCATCCTCAAGCTGTTTACCAGCAAAGATAAGCCTCTGCTGATCTGGTGGA 21029080 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | | ||||||||| ||| || ||||| | | | || ||| ||| || Sbjct 21029079 ATCCCTTCCTTGTCCTGGATCTTAGCTTTGACATTATCAATGGTATCGGAGCTTTCAACC 21029020 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | || |||||||| || || || ||||| |||||||||||||| Sbjct 21029019 TCAAGGGTTATGGTTTTTCCAGTGAGAGTCTTCACAAAGATTTGCAT 21028973 Score = 84.2 bits (92), Expect = 3e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || || || | ||| | |||||||| | || ||||| || || ||||| || || Sbjct 20996259 CCACCCCTGAGACGGAGGACCAAATGAAGGGTTGATTCCTTCTGGATGTTGTAGTCTGCA 20996200 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || || | || ||||| || ||||| || || ||||| | |||||||| | || Sbjct 20996199 AGTGTGCGTCCATCCTCTAGTTGTTTACCGGCAAAGATGAGCCTTTGCTGGTCTGGTGGG 20996140 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | | ||||| ||| ||| |||| | ||||| | | | |||||| |||||| Sbjct 20996139 ATCCCTTCCTTATCC-TGAATTTTGGCTTTGACATTGTCAATGGTGTCGGAGCTTTCCAC 20996081 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | ||||| || || || || || |||||||||||||| ||||| Sbjct 20996080 CTCAAGGGTGATAGTCTTTCCAGTGAGGGTCTTTACAAAGATCTGCAT 20996033 Score = 82.4 bits (90), Expect = 9e-11 Identities = 159/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || || || | ||| | |||||||| | || ||||| || || ||||| || || Sbjct 21029427 CCACCCCTGAGACGAAGTACCAAATGAAGGGTTGATTCCTTCTGGATGTTGTAGTCTGCA 21029368 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || || | || || || || || ||||| || ||||| | |||||||| | || Sbjct 21029367 AGTGTGCGTCCATCCTCAAGTTGTTTGCCAGCAAAGATGAGCCTTTGCTGGTCTGGTGGG 21029308 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGA---TTC 43132 | | ||||| ||| ||| |||| | ||||| | | | ||||| ||| ||| Sbjct 21029307 ATCCCTTCCTTATCC-TGAATTTTGGCTTTGACATTGTCAATGGTGTC---CGAGCTTTC 21029252 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| || | || ||||| || || || || |||||||||||||||||||| Sbjct 21029251 CACCTCAAGGGTAATGGTCTTTCCAGTGAGGGTCTTTACAAAGATTTGCAT 21029201 >seq616 Length=36375926 Score = 82.4 bits (90), Expect = 9e-11 Identities = 65/77 (84%), Gaps = 2/77 (3%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGG--ACAT 60114 |||||| ||| || || ||| ||||||||| |||| |||||||||||||||| | || Sbjct 19572111 AAAAATATTCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATAT 19572170 Query 60115 ACTCACCACTATACTAC 60131 ||||||||||||||||| Sbjct 19572171 ACTCACCACTATACTAC 19572187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571807607487440