Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20clementina_20[refseq_20GCF_5F000493195.1_202013-11-08] 1,398 sequences; 301,364,702 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq1282 84.2 2e-11 >seq1282 Length=25111302 Score = 84.2 bits (92), Expect = 2e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 20443 GCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTT 20502 |||||| || || || |||||||||||||| || || ||||||||||| |||||||| Sbjct 5666141 GCTAATGGGGAGTTATCATGTCAAATGTATCAGCGCTCTGCTGATATGGGCCTGGGTGTG 5666082 Query 20503 CCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTT 20553 || || || ||||| ||||| || | || | |||||||| |||||| Sbjct 5666081 CCGTTTAACATTGCTTCATATGCCCTCTTGACATGCATGATTGCTCATGTT 5666031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399177198653110