Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20clementina_20[refseq_20GCF_5F000493195.1_202013-11-08] 1,398 sequences; 301,364,702 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq1 168 2e-36 seq1165 152 1e-31 seq1340 102 2e-16 >seq1 Length=28940139 Score = 168 bits (186), Expect = 2e-36 Identities = 156/198 (79%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 |||||||| |||||||| || ||||||| || || | || |||||||| || |||||| Sbjct 21033148 GTAGATTCCTTCTGAATGTTGTAGTCAGCAAGGGTACGGCCATCTTCTAGCTGCTTTCCA 21033089 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| || ||||| ||||||||||| ||||| || || ||||||||||| || || Sbjct 21033088 GCAAAAATCAGTCTCTGCTGATCAGGAGGGATTCCCTCCTTGTCCTGAATCTTAGCCTTG 21033029 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | ||||| | || || || | || ||||| |||||||| || ||| Sbjct 21033028 ACATTGTCGATTGTATCAGAACTCTCAACTTCCAAGGTGATAGTTTTACCAGTCAGGGTT 21032969 Query 104543 TTTACAAATATCTGCATT 104560 || ||||||||||||||| Sbjct 21032968 TTCACAAATATCTGCATT 21032951 Score = 158 bits (174), Expect = 3e-33 Identities = 153/197 (78%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||||||||| || |||||||| | ||||| || || ||||| || || |||||| Sbjct 20996685 GTGGATTCTTTCTGGATGTTATAGTCTGCAAGAGTCCTTCCATCTTCAAGCTGCTTTCCA 20996626 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| |||||||| ||||| || || || || || || |||||||| |||||||| Sbjct 20996625 GCAAAAATGAGCCTCTGCTGATCTGGTGGGATACCCTCCTTGTCCTGAATTTTTGCTTTC 20996566 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | ||| || | ||| ||||| || ||||| || || || || || ||| Sbjct 20996565 ACGTTGTCGATGGTGTCAGAACTTTCAACCTCAAGAGTAATTGTTTTTCCGGTGAGGGTT 20996506 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 20996505 TTCACAAAGATCTGCAT 20996489 Score = 158 bits (174), Expect = 3e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| |||||||| | || || || || | || || || |||||||| |||||||| Sbjct 21032953 ATTCCACCTCTTAGACGGAGGACCAGGTGGAGGGTGGACTCCTTCTGAATGTTATAGTCG 21032894 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || | || || || |||||||| ||||||||||| ||||| || || || || Sbjct 21032893 GCAAGGGTGCGGCCATCCTCAAGTTGTTTGCCAGCAAAAATAAGCCTTTGCTGGTCTGGT 21032834 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| || ||||||||||| ||||| ||||| || | || ||| ||| Sbjct 21032833 GGGATCCCTTCCTTGTCCTGAATCTTGGCTTTGACATTGTCAATAGTGTCGGAGCTTTCC 21032774 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || ||||| || ||||| || || |||||||| |||||||| Sbjct 21032773 ACCTCAAGGGTGATAGTTTTTCCAGTGAGGGTCTTTACAAAGATCTGCAT 21032724 Score = 154 bits (170), Expect = 3e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || || || | ||| || | || | || ||||| ||||| |||||||||||| Sbjct 20995806 ATACCACCCCTAAGTCGAAGGACCAAGTGGAGGGTTGATTCCTTCTGGATATTATAGTCA 20995747 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || | ||| || || || ||||| |||||||| || |||||||| ||||| || Sbjct 20995746 GCGAGTGTGCGACCATCCTCGAGCTGTTTACCAGCAAAGATAAGCCTCTGCTGATCTGGT 20995687 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| || ||||| ||||| ||||||||||| || | ||| ||| ||| Sbjct 20995686 GGGATCCCTTCCTTGTCCTGGATCTTGGCTTTTACATTATCAATGGTGTCGGAGCTTTCA 20995627 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || || ||||| || || || ||||| ||||| || ||||| Sbjct 20995626 ACCTCAAGGGTTATTGTCTTGCCGGTGAGAGTTTTCACAAAGATTTGCAT 20995577 Score = 152 bits (168), Expect = 1e-31 Identities = 164/216 (76%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || | ||| | || || || ||||| || || ||||||| ||||| | ||| || Sbjct 20996473 AAGCACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTACGACCATC 20996414 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 ||| |||||||| || ||||| |||| ||||||||||||||| || || || || || || Sbjct 20996413 TTCAAGTTGTTTGCCGGCAAAGATTAACCTCTGTTGATCAGGTGGGATGCCCTCCTTGTC 20996354 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGTGTAAT 104523 ||| ||||| || || ||||| || | || || ||| ||| ||||| | || || Sbjct 20996353 CTGTATCTTGGCCTTGACATTGTCGATCGTGTCAGAGCT---TTCAACCTCCAAAGTTAT 20996297 Query 104524 AGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||||||||||| || ||||| ||||| |||||||| Sbjct 20996296 AGTCTTACCAGTCAGGGTTTTCACAAAAATCTGCAT 20996261 Score = 152 bits (168), Expect = 1e-31 Identities = 152/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||||||||| || |||||||| | ||||| || || ||||| || || |||||| Sbjct 21029853 GTGGATTCTTTCTGGATGTTATAGTCTGCAAGAGTCCTTCCATCTTCAAGCTGCTTTCCA 21029794 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| |||||||| ||||| || || || || || || || ||||| || ||||| Sbjct 21029793 GCAAAAATGAGCCTCTGCTGATCTGGTGGGATACCCTCCTTGTCTTGAATTTTGGCTTTC 21029734 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | ||| || | ||||||||| || || || || || || || || ||| Sbjct 21029733 ACATTGTCAATGGTGTCAGAACTTTCTACCTCAAGAGTGATTGTTTTTCCTGTCAGGGTT 21029674 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 21029673 TTCACAAAAATCTGCAT 21029657 Score = 149 bits (164), Expect = 1e-30 Identities = 173/231 (75%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || || || | |||||| | ||| | || ||||| ||||| || || ||||| Sbjct 21029430 ATACCACCCCTGAGACGAAGTACCAAATGAAGGGTTGATTCCTTCTGGATGTTGTAGTCT 21029371 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || | || || || |||||||| |||||||| || ||||| || || || || Sbjct 21029370 GCAAGTGTGCGTCCATCCTCAAGTTGTTTGCCAGCAAAGATGAGCCTTTGCTGGTCTGGT 21029311 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAG-GTTC 104508 || || ||||| ||||||||||| || ||||| ||||| || | ||| || | || ||| Sbjct 21029310 GGGATCCCTTCCTTATCCTGAATTTTGGCTTTGACATTGTCAATGGTGTC-CGAGCTTTC 21029252 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || ||||| ||||| ||||| || || |||||||| || ||||| Sbjct 21029251 CACCTCAAGGGTAATGGTCTTTCCAGTGAGGGTCTTTACAAAGATTTGCAT 21029201 Score = 145 bits (160), Expect = 2e-29 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || || || | || || | ||| | || ||||| ||||| || || ||||| Sbjct 20996262 ATGCCACCCCTGAGACGGAGGACCAAATGAAGGGTTGATTCCTTCTGGATGTTGTAGTCT 20996203 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || | || || ||||||||||| || ||||| || ||||| || || || || Sbjct 20996202 GCAAGTGTGCGTCCATCCTCTAGTTGTTTACCGGCAAAGATGAGCCTTTGCTGGTCTGGT 20996143 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| ||||||||||| || ||||| ||||| || | ||| ||| ||| Sbjct 20996142 GGGATCCCTTCCTTATCCTGAATTTTGGCTTTGACATTGTCAATGGTGTCGGAGCTTTCC 20996083 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || |||||||| ||||| || || |||||||| |||||||| Sbjct 20996082 ACCTCAAGGGTGATAGTCTTTCCAGTGAGGGTCTTTACAAAGATCTGCAT 20996033 Score = 143 bits (158), Expect = 6e-29 Identities = 150/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || ||||| |||| || || | ||| || || || ||||| || Sbjct 20996001 GTTGACTCCTTCTGGATGTTATAATCAGCAAGTGTGCGACCATCCTCGAGCTGTTTACCG 20995942 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || ||||||||||| || || || || ||||| || || |||||||| ||||| Sbjct 20995941 GCAAAGATAAGCCTCTGTTGGTCTGGTGGGATCCCTTCCTTGTCTTGAATCTTGGCTTTC 20995882 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | ||| ||| ||| ||||| || ||||| ||||| ||||| || || Sbjct 20995881 ACATTGTCAATGGTGTCGGAGCTTTCCACCTCAAGAGTAATCGTCTTGCCAGTGAGGGTC 20995822 Query 104543 TTTACAAATATCTGCAT 104559 |||||||| |||||||| Sbjct 20995821 TTTACAAAGATCTGCAT 20995805 Score = 141 bits (156), Expect = 2e-28 Identities = 152/200 (76%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||||| |||||| | || ||||| |||||||| ||| Sbjct 21029625 GTTGACTCCTTCTGGATGTTGTAGTCAGCTAGAGTACGGCCATCTTCAAGTTGTTTGCCA 21029566 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || | ||||| ||||| ||||| || || || || ||||||||||| || || Sbjct 21029565 GCAAAGATCAATCTCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGAATCTTAGCCTTG 21029506 Query 104483 ACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539 ||||| || | || || ||| ||| ||||| | || ||||| |||||||| || Sbjct 21029505 ACATTGTCGATTGTGTCAGAGCT---TTCAACCTCCAAAGTTATAGTTTTACCAGTCAGG 21029449 Query 104540 GTTTTTACAAATATCTGCAT 104559 ||||| ||||| |||||||| Sbjct 21029448 GTTTTCACAAAAATCTGCAT 21029429 Score = 140 bits (154), Expect = 7e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||||||||| ||||| | || || || || ||||| || || || ||| Sbjct 21033376 GTGGACTCCTTCTGAATATTGTAGTCGGCGAGGGTCCTTCCATCTTCAAGCTGCTTACCA 21033317 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || |||||||| || ||||| || || ||||| || || |||||||| ||||| Sbjct 21033316 GCAAAGATAAGCCTCTGCTGGTCAGGCGGGATGCCTTCCTTGTCTTGAATCTTAGCTTTA 21033257 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | ||||| | || || |||| ||||| ||||| |||||||| || Sbjct 21033256 ACATTGTCAATAGTATCCGAACTCTCAACTTCTAAGGTAATGGTCTTGCCAGTAAGAGTC 21033197 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| || ||||| Sbjct 21033196 TTAACAAAGATTTGCAT 21033180 Score = 138 bits (152), Expect = 3e-27 Identities = 171/233 (73%), Gaps = 6/233 (3%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || || || | ||| || | || | || || || ||||| || ||||||||| Sbjct 21032725 ATACCACCCCTGAGACGAAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCA 21032666 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | ||||| | || || || |||||||| |||||||| || ||||| || || || || Sbjct 21032665 GCAAGAGTGCGGCCATCCTCGAGTTGTTTGCCAGCAAAGATGAGCCTTTGCTGGTCTGGT 21032606 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGT 104506 || || ||||| |||||||| ||||| ||||||||||| || | ||| || ||| | Sbjct 21032605 GGGATCCCTTCCTTATCCTGGATCTTGGCTTTTACATTATCAATGGTGTCAGAGCT---T 21032549 Query 104507 TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| || || || ||||| || || || || || ||||| || ||||| Sbjct 21032548 TCGACCTCAAGGGTTATGGTCTTGCCGGTGAGAGTCTTCACAAAGATTTGCAT 21032496 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || || || ||||| || || || |||| ||||| || || || Sbjct 20996928 AGCACAAGATGCAGAGTGGACTCCTTCTGGATGTTGTAATCAGCAAGAGTCCTTCCATCC 20996869 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || ||||||||||||||||| || | |||||| || || || || || || || |||||| Sbjct 20996868 TCAAGTTGTTTTCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGAATCCCCTCCTTATCC 20996809 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 || ||||| || || ||||| || | || || | || ||||| | ||| || || Sbjct 20996808 TGGATCTTAGCCTTCACATTGTCAATTGTGTCCGAACTCTCAACCTCCAATGTGATGGTT 20996749 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| ||||| || ||||| |||||||| Sbjct 20996748 TTCCCAGTGAGTGTCTTCACAAAAATCTGCAT 20996717 Score = 131 bits (144), Expect = 4e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || |||||||| ||||| || | || || ||||| ||||| || || || ||| Sbjct 21033604 GTGGACTCCTTCTGAATGTTATAATCTGCAAGGGTCCTACCATCTTCAAGCTGCTTGCCA 21033545 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| | |||||| || || ||||| || || || ||||| || ||||| || || Sbjct 21033544 GCAAAAATCAACCTCTGCTGGTCGGGAGGAATGCCCTCCTTATCTTGGATCTTGGCCTTC 21033485 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| |||| ||| || | ||| ||||| | || || ||||| ||||| | || Sbjct 21033484 ACATTATCTATGGTGTCTGAACTTTCCACCTCCAAAGTGATGGTCTTCCCAGTCAAAGTC 21033425 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 21033424 TTCACAAAGATCTGCAT 21033408 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || || || ||||| || || || |||| ||||| || || || Sbjct 21030096 AGCACAAGATGCAGAGTGGACTCCTTCTGGATGTTGTAATCAGCAAGAGTCCTTCCATCC 21030037 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || ||||| ||||||||||| || | |||||| || || || || || || || |||||| Sbjct 21030036 TCAAGTTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCCGGTGGAATCCCCTCCTTATCC 21029977 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 || ||||| || || ||||| || | || || | || ||||| | ||| || || Sbjct 21029976 TGGATCTTAGCCTTAACATTGTCAATTGTGTCCGAACTCTCAACCTCCAATGTGATGGTT 21029917 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| ||||| || ||||| |||||||| Sbjct 21029916 TTCCCAGTGAGTGTCTTCACAAAAATCTGCAT 21029885 >seq1165 Length=25613772 Score = 152 bits (168), Expect = 1e-31 Identities = 163/213 (77%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || || || |||||||| ||||| |||| || ||| | || || Sbjct 10817565 AGCACAAGATGGAGGGTGGACTCCTTCTGAATGTTATAATCAGCTAAAGTACGGCCATCC 10817506 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || || || |||||||| || |||||||| ||||| || || || ||||| || ||| Sbjct 10817505 TCAAGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGATCTGGTGGAATCCCTTCCTTGTCC 10817446 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGT 104526 ||||||||||| || ||||| || | ||||| || | || ||||| || |||||||| Sbjct 10817445 TGAATCTTTGCCTTAACATTATCAATAGTATCTG-AGCTCTCCACCTCCAGAGTAATAGT 10817387 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| ||||| | || || |||||||||||||| Sbjct 10817386 CTTCCCAGTCAAGGTCTTGACAAATATCTGCAT 10817354 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || || || |||||||| || || |||| ||||| | ||||| Sbjct 12024826 AGGACGAGATGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGCCAGAGTACGCCCGTCC 12024767 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || || || ||||| || || |||||||| |||||||| || || ||||| || ||| Sbjct 12024766 TCAAGCTGCTTCCCAGCGAAGATGAGCCTCTGCTGATCAGGTGGGATCCCTTCCTTGTCC 12024707 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 |||||||| ||||| ||||| || | |||||| | |||||||| || ||||| ||| Sbjct 12024706 TGAATCTTGGCTTTGACATTGTCAATGGTATCAGAACTCTCTACCTCCAGGGTAATCGTC 12024647 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || | ||| || ||||| |||||||| Sbjct 12024646 TTCCCGGTCAATGTCTTAACAAAAATCTGCAT 12024615 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || || || || ||||| ||||| |||| || | | | || || Sbjct 10936564 AGGACAAGATGGAGGGTGGACTCCTTTTGAATGTTATAATCAGCTAAATTACGGCCATCC 10936505 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || || || |||||||| || |||||||| |||||||| || || ||||| |||||| Sbjct 10936504 TCAAGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGATCAGGTGGAATCCCTTCCTTATCC 10936445 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 |||||||| || || ||||| || | |||||| | || ||||| || ||||| || Sbjct 10936444 TGAATCTTAGCCTTGACATTGTCAATGGTATCAGAACTCTCCACCTCCAGGGTAATTGTT 10936385 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || |||||||| || || || || |||||||| Sbjct 10936384 TTCCCAGTAAGAGTCTTGACGAAAATCTGCAT 10936353 Score = 136 bits (150), Expect = 9e-27 Identities = 172/234 (74%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| || | ||||| || || ||||| || || |||||||| ||||| || || || Sbjct 10936126 ATTCCACCACGAAGCCTGAGGACAAGATGCAAAGTGGATTCTTTTTGAATGTTGTAATCG 10936067 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | | ||| | |||||||| ||||| || |||||||| || || | ||| || || || Sbjct 10936066 GCCAAAGTGCGGCCGTCTTCGAGTTGCTTCCCAGCAAAGATGAGACGCTGCTGGTCCGGC 10936007 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || ||||| || || ||||| ||||| || || || || || | || ||| || | || Sbjct 10936006 GGAATTCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATTGTGTCGG-AGCTCTC 10935948 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 || || || || || ||||| || || || ||||| |||||||||||||| || Sbjct 10935947 CACTTCGAGGGTGATTGTCTTGCCGGTGAGGGTTTTCACAAATATCTGCATCTT 10935894 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || ||||| || || || ||||| |||| || || | || || Sbjct 10868670 AGGACGAGATGGAGGGTGGATTCCTTTTGGATGTTATAATCAGCAAGGGTACGGCCATCC 10868611 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || || || ||||| || || |||||||| ||||| || || || ||||| |||||| Sbjct 10868610 TCAAGCTGCTTCCCAGCGAAGATAAGCCTCTGCTGATCGGGTGGAATCCCTTCCTTATCC 10868551 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 ||||||||||| || ||||| || | ||||| | || ||||| || ||||||||| Sbjct 10868550 TGAATCTTTGCCTTGACATTATCAATTGTATCAGAACTCTCCACCTCCAGAGTAATAGTC 10868491 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| | || || ||||| || ||||| Sbjct 10868490 TTCCCAGTCAAAGTCTTGACAAAAATTTGCAT 10868459 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || || || || || || ||||| |||| || || | ||||| Sbjct 10928783 AGGACAAGATGGAGGGTGGACTCCTTTTGGATGTTATAATCAGCAAGGGTACGGCCGTCC 10928724 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 ||||| || || ||||| || || |||||||| ||||| || || || ||||| || ||| Sbjct 10928723 TCTAGCTGCTTCCCAGCGAAGATGAGCCTCTGCTGATCTGGTGGAATCCCTTCCTTGTCC 10928664 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 ||||||||||| || ||||| || | ||||| | || ||||| || ||||||||| Sbjct 10928663 TGAATCTTTGCCTTGACATTATCAATTGTATCAGAACTCTCCACCTCCAGAGTAATAGTC 10928604 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| | || || ||||| || ||||| Sbjct 10928603 TTCCCAGTCAAAGTCTTGACAAAAATTTGCAT 10928572 Score = 131 bits (144), Expect = 4e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || |||||||| ||||||||||||| | || | |||||||| | |||||||||| Sbjct 10868427 GTTGACTCTTTCTGGATATTATAGTCAGCCAACGTACGGCCGTCTTCCAATTGTTTTCCA 10868368 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || | || |||||||| || || || || || || || || ||||| || || Sbjct 10868367 GCAAAGATCAATCTTTGTTGATCTGGTGGGATCCCCTCCTTGTCTTGGATCTTGGCCTTG 10868308 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | ||||| | || ||||| || || || ||||| ||||| || ||| Sbjct 10868307 ACATTATCAATCGTATCTGAACTCTCCACCTCGAGAGTGATCGTCTTCCCAGTTAGGGTT 10868248 Query 104543 TTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 10868247 TTGACGAAGATCTGCAT 10868231 Score = 116 bits (128), Expect = 9e-21 Identities = 154/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| | || || || |||||||| || || || | || || || || || || Sbjct 10936333 ACCAGATGAAGAGTCGACTCCTTCTGAATGTTGTAATCCGCAAGCGTCCTTCCATCCTCC 10936274 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 || || || |||||||| || || | ||| |||||||| || || |||||||||||||| Sbjct 10936273 AGCTGCTTCCCAGCAAAGATCAGGCGCTGCTGATCAGGTGGGATCCCTTCTTTATCCTGG 10936214 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTT 104529 || ||||| || || || || | ||| || || | || || || || || || ||||| Sbjct 10936213 ATTTTTGCCTTGACGTTGTCAATGGTGTC-AGAGCTCTCGACTTCCAGAGTGATCGTCTT 10936155 Query 104530 ACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || || ||||| || || ||||||||| Sbjct 10936154 TCCCGTCAGGGTTTTGACGAAGATCTGCATT 10936124 Score = 113 bits (124), Expect = 1e-19 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || || || | || || ||||| | || || || ||||| || ||||| || Sbjct 10817355 ATACCACCCCTCAGGCGCAGAACCAGATGAAGGGTCGACTCCTTCTGGATGTTATAATCC 10817296 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | ||||| || || || || || ||||| ||||| || || | | ||| ||||| || Sbjct 10817295 GCAAGAGTCCTTCCATCCTCAAGCTGTTTGCCAGCGAAGATCAAACGCTGCTGATCCGGT 10817236 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || |||||||| || || || || ||||| || ||||| || | || || || | || Sbjct 10817235 GGAATTCCTTCCTTGTCTTGGATTTTTGCCTTGACATTGTCAATTGTGTCTG-AGCTCTC 10817177 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || | ||||| || || |||||||| || || |||||||||||||| Sbjct 10817176 AACTTCCAAAGTAATTGTTTTCCCAGTAAGGGTCTTAACAAATATCTGCAT 10817126 Score = 109 bits (120), Expect = 1e-18 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || ||||| | || || || ||||| || || || || | | || | ||||| Sbjct 10816426 AAGGACAAGATGAAGGGTTGACTCCTTCTGGATGTTGTAATCGGCCAAGGTGCGGCCGTC 10816367 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || ||||||||||| || |||||||| || || || || ||||| || || || Sbjct 10816366 CTCGAGCTGCTTTCCAGCAAAGATAAGCCTCTGCTGGTCCGGCGGAATTCCCTCCTTGTC 10816307 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525 || ||||| || ||||| || || | ||| || | || | || || || || ||||||| Sbjct 10816306 TTGGATCTTGGCCTTTACGTTGTCGATGGTGTC-CGAGCTCTCGACTTCGAGAGTAATAG 10816248 Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 | || || || | ||||| || || |||||||| Sbjct 10816247 TTTTGCCGGTCAAGGTTTTCACGAAGATCTGCAT 10816214 Score = 102 bits (112), Expect = 2e-16 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| | || ||||| |||||||| || || || | || || || || || || Sbjct 12024595 ACCAGATGAAGAGTTGATTCCTTCTGAATGTTGTAATCCGCGAGCGTCCTTCCATCCTCC 12024536 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 || || || ||||| || || | | ||| || || || || || ||||| || ||||| Sbjct 12024535 AGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCCGGCGGAATCCCTTCCTTGTCCTGG 12024476 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTT 104529 ||||| || || || || || | || ||| || | || || || || ||||| ||||| Sbjct 12024475 ATCTTGGCCTTGACGTTGTCGATCGTGTCGG-AGCTCTCGACTTCGAGGGTAATCGTCTT 12024417 Query 104530 ACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || ||||| || ||||||||||| Sbjct 12024416 TCCCGTTAGGGTTTTGACGAATATCTGCAT 12024387 Score = 98.7 bits (108), Expect = 2e-15 Identities = 105/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390 |||| || || ||||| || || | || | || || || || ||||| ||||| || | Sbjct 9951259 TTCCTCCCCTGAGCCTCAGGACCAAGTGAAGCGTCGACTCCTTTTGAATGTTATAATCTG 9951318 Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450 || ||||| || ||||| | |||||| ||||||||||| || ||||| ||||| |||| Sbjct 9951319 CAAGCGTTCTGCCATCTTCCAATTGTTTACCAGCAAAAATCAGTCTCTGCTGATCGGGAG 9951378 Query 104451 GTATTCCTTCTTTATCCTG 104469 | || ||||| || ||||| Sbjct 9951379 GAATGCCTTCCTTGTCCTG 9951397 Score = 95.1 bits (104), Expect = 3e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || || || | ||| || || || | || || ||||||||||| || || || Sbjct 10817127 ATGCCTCCCCTGAGACGAAGAACAAGGTGGAGAGTTGACTCTTTCTGAATGTTGTAATCG 10817068 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | | || | || ||||| | || || || || || || | || || || || || Sbjct 10817067 GCCAAGGTGCGGCCATCTTCCAACTGCTTACCGGCGAAGATCAATCTTTGCTGGTCCGGC 10817008 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 ||||| || ||||| ||||| ||||| || || || || || | ||||| | || Sbjct 10817007 GGTATCCCCTCTTTGTCCTGGATCTTGGCCTTGACGTTATCAATCGTATCCGAACTCTCC 10816948 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || || ||||| ||||| || ||||| || || |||||||| Sbjct 10816947 ACCTCCAGAGTGATCGTCTTCCCAGTTAGGGTTTTGACGAAGATCTGCAT 10816898 >seq1340 Length=31410901 Score = 102 bits (112), Expect = 2e-16 Identities = 106/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390 |||| || || ||||| || || | || | ||| || || |||||||| ||||| |||| Sbjct 29410137 TTCCTCCCCTGAGCCTCAGGACCAAGTGAAGTGTTGACTCCTTCTGAATGTTATAATCAG 29410078 Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450 ||||| | || ||||| | |||||| ||||||||||| | ||||| ||||| |||| Sbjct 29410077 CAAGAGTACGGCCATCTTCCAATTGTTTCCCAGCAAAAATCAATCTCTGCTGATCCGGAG 29410018 Query 104451 GTATTCCTTCTTTATCCTG 104469 | || ||||| || ||||| Sbjct 29410017 GAATGCCTTCCTTGTCCTG 29409999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151377776295784